BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,604,952	T→C	S291P (TCC→CCC)	zntA →	zinc‑transporting ATPase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,604,952	0	T	C	99.7%	1131.7 / ‑4.9	365	S291P (TCC→CCC)	zntA	zinc‑transporting ATPase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (177/186); minor base G (1/0); total (178/187)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01

Only 100 of 377 total aligned reads displayed.

ATTGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAA  >  NC_000913/3604862‑3605041

 ttGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCa                                                                                        <  1:3587204/93‑1 (MQ=255)

 ttGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCa                                                                                        >  1:3422220/1‑93 (MQ=255)

   gAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCAtt                                                                                      <  1:2623251/93‑1 (MQ=255)

    aaGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTc                                                                                     <  1:2462117/93‑1 (MQ=255)

    aaGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTc                                                                                     <  1:391823/93‑1 (MQ=255)

    aaGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTc                                                                                     <  1:6633955/93‑1 (MQ=255)

     aGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTcc                                                                                    >  2:7292390/1‑93 (MQ=255)

     aGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTcc                                                                                    >  1:7360197/1‑93 (MQ=255)

      gTCGCCGCAGGTGGGCGTTTGCCTGCAGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCg                                                                                   <  1:405044/93‑1 (MQ=255)

         gccgcAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTg                                                                                <  1:2235788/93‑1 (MQ=255)

         cccgcAGGTGTGTGGTCGCCTGCCGACGGTAAACTGCTCTCACCGTTTCCCAGTGTTGATGAACGCGCCCTCACCGACGAACCCATTCCGGTg                                                                                <  2:868166/92‑1 (MQ=255)

           cgcAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGa                                                                              <  1:4459376/93‑1 (MQ=255)

           cgcAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGa                                                                              >  1:2852871/1‑93 (MQ=255)

               ggTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAgcgc                                                                          >  2:4478284/1‑93 (MQ=255)

               ggTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAgcgc                                                                          >  1:6165811/1‑93 (MQ=255)

                 tGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAgcgcgc                                                                        >  2:274766/1‑93 (MQ=255)

                   ggCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCaa                                                                      >  2:3596088/1‑93 (MQ=255)

                   ggCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGCGGAGCGCGCaa                                                                      >  1:3040963/1‑93 (MQ=255)

                    gCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAAc                                                                     <  1:6790933/93‑1 (MQ=255)

                    gCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAAc                                                                     <  2:5007428/93‑1 (MQ=255)

                       tttGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACggg                                                                  >  1:7262081/1‑93 (MQ=255)

                       tttGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACggg                                                                  >  1:4966248/1‑93 (MQ=255)

                       tttGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACggg                                                                  >  1:854015/1‑93 (MQ=255)

                       tttGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACggg                                                                  <  1:890688/93‑1 (MQ=255)

                       ttgccctgccGACGGTAAGCTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACggg                                                                  <  2:6143179/89‑1 (MQ=255)

                         tgcctgccGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCg                                                                <  1:6864745/93‑1 (MQ=255)

                          gcctgccGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGa                                                               <  1:6926877/93‑1 (MQ=255)

                          gcctcccGACGGAAAACTGCTCTCACCCTCTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGa                                                               <  2:5795921/93‑1 (MQ=255)

                            ctgccGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATa                                                             >  2:2614028/1‑93 (MQ=255)

                             tgccGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATaa                                                            >  1:7523668/1‑93 (MQ=255)

                             tgccGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATaa                                                            >  1:5882239/1‑93 (MQ=255)

                                cGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAGCCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGt                                                         <  1:2078517/93‑1 (MQ=255)

                                 gACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCCACGCGCGATAAAGTc                                                        >  2:186355/1‑93 (MQ=255)

                                 gACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTc                                                        <  1:4658893/93‑1 (MQ=255)

                                  aCGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTcc                                                       >  2:3069534/1‑93 (MQ=255)

                                   cGGTAAACTGCTCTCTCCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTccc                                                      <  2:3041037/93‑1 (MQ=255)

                                    ggTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCct                                                     <  2:2534921/93‑1 (MQ=255)

                                    ggTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCct                                                     >  1:955950/1‑93 (MQ=255)

                                     gTAAACGCCTCCCACCGTTTGCCAGTTTAGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCctg                                                    <  2:2139226/93‑1 (MQ=255)

                                      tAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCctgc                                                   <  2:2017018/93‑1 (MQ=255)

                                      tAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCctgc                                                   >  1:2959482/1‑93 (MQ=255)

                                        aaCTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCACGCAACGGGCGATAAAGTCCctgctg                                                 <  1:6243310/93‑1 (MQ=255)

                                         aCTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTgg                                                >  2:7545166/1‑93 (MQ=255)

                                          cTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCCACGGGCGATAAAACACCTGCTTGt                                               >  2:6397450/1‑93 (MQ=255)

                                          cTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGt                                               >  2:5693656/1‑93 (MQ=255)

                                            gCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGc                                             <  1:5459911/93‑1 (MQ=255)

                                            gCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGc                                             >  2:2898654/1‑93 (MQ=255)

                                             ctctCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGcc                                            <  1:4829110/93‑1 (MQ=255)

                                              tctcACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGcca                                           >  2:7496326/1‑93 (MQ=255)

                                               ctcACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTTGTGccac                                          >  1:5040442/1‑93 (MQ=255)

                                                tcACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGccacc                                         <  1:5408662/93‑1 (MQ=255)

                                                tcACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGccacc                                         <  2:7212879/93‑1 (MQ=255)

                                                tcACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGccacc                                         <  2:4690402/93‑1 (MQ=255)

                                                 cACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGccacca                                        <  1:116821/93‑1 (MQ=255)

                                                  aCCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAg                                       >  1:5238890/1‑93 (MQ=255)

                                                  aCCGTTTGCCAGTTTTGATGAAAGAGCCCTGACCGGCGAACCCATTCCGGTGGATCGCGCAACGGGCGATAAAGCCCCCGCTGGTTCCACCAg                                       <  2:4094452/93‑1 (MQ=255)

                                                   ccGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCCTTCCGGTGGAGCGCGCAACGGGCGATAAAGGACCTGCTGGTGCCACCAGc                                      >  2:3482102/1‑93 (MQ=255)

                                                   ccGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGc                                      <  1:4279310/93‑1 (MQ=255)

                                                      tttGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTa                                   <  1:7177992/93‑1 (MQ=255)

                                                      tttGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTa                                   <  1:3673150/93‑1 (MQ=255)

                                                      tttGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTa                                   >  1:5126450/1‑93 (MQ=255)

                                                       ttGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAg                                  >  2:1364711/1‑93 (MQ=255)

                                                        tGCCAGTTTTGATGAAAGCGCCCTGACCGGGGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGa                                 <  2:1958246/93‑1 (MQ=255)

                                                         gCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGAc                                <  1:1828722/93‑1 (MQ=255)

                                                         gCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGAc                                <  1:3175619/93‑1 (MQ=255)

                                                         gCCAGTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGAc                                >  1:4190634/1‑93 (MQ=255)

                                                             gTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTc                            <  2:3953727/93‑1 (MQ=255)

                                                             gTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTc                            <  1:6420215/93‑1 (MQ=255)

                                                             gTTTTGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCCGCTGGTGCCACCAGCGTAGACCGTc                            >  1:273683/1‑93 (MQ=255)

                                                              ttttGATGAAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCt                           >  1:4727064/1‑93 (MQ=255)

                                                                ttGATGAAAGCGCCCTGACCGGCGAGCCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTgg                         <  2:6700432/93‑1 (MQ=255)

                                                                 tgatgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGt                        <  1:1629617/93‑1 (MQ=255)

                                                                  gatgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTg                       <  1:1499502/93‑1 (MQ=255)

                                                                  gatgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTg                       >  1:3367918/1‑93 (MQ=255)

                                                                   atgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGa                      <  2:552559/93‑1 (MQ=255)

                                                                   atgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGa                      >  2:4637418/1‑93 (MQ=255)

                                                                    tgaAAGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGAc                     <  1:5488079/93‑1 (MQ=255)

                                                                      aaaGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCATCGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGt                   <  1:1370969/93‑1 (MQ=255)

                                                                      aaaGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACAAGCGTAGATCGTCTGGTGACGt                   >  2:3706044/1‑93 (MQ=255)

                                                                        aGCGCCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTg                 >  2:6967299/1‑93 (MQ=255)

                                                                         gcgcCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCACCGTAAACCGCCTGGTGCCGTTgg                >  2:3875548/1‑93 (MQ=255)

                                                                           gcCCTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGaa              >  2:1707463/1‑93 (MQ=255)

                                                                             ccTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAgg            >  2:5374327/1‑92 (MQ=255)

                                                                             ccTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGt            <  2:701212/93‑1 (MQ=255)

                                                                             ccTGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGt            >  2:688209/1‑93 (MQ=255)

                                                                               tGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGGAGTGc          >  2:4304127/1‑93 (MQ=255)

                                                                               tGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGc          >  1:7827446/1‑93 (MQ=255)

                                                                               tGACCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGc          <  2:2693493/93‑1 (MQ=255)

                                                                                 aCCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTg        <  2:5300946/93‑1 (MQ=255)

                                                                                 aCCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTg        <  2:320300/93‑1 (MQ=255)

                                                                                 aCCGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTg        >  2:6465804/1‑93 (MQ=255)

                                                                                  ccGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGt       >  1:1987713/1‑93 (MQ=255)

                                                                                   cGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTc      <  1:5362741/93‑1 (MQ=255)

                                                                                   cGGCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTc      <  1:5807185/93‑1 (MQ=255)

                                                                                    ggCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCa     >  2:3383270/1‑93 (MQ=255)

                                                                                    ggCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCa     <  2:2288075/93‑1 (MQ=255)

                                                                                    ggCGAACCCATTCCGGGGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCGGTcg     >  1:1105397/1‑92 (MQ=255)

                                                                                     gCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTccg    >  2:1564529/1‑91 (MQ=255)

                                                                                     gCGAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAg    >  2:7833860/1‑93 (MQ=255)

                                                                                       gAACCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGaa  <  1:2336870/93‑1 (MQ=255)

ATTGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAA  >  NC_000913/3604862‑3605041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`