BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,623,435	T→C	I334V (ATC→GTC)	b3485 ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,623,435	0	T	C	100.0%	1257.7 / NA	400	I334V (ATC→GTC)	b3485	putative transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (199/201); total (199/201)

Only 100 of 409 total aligned reads displayed.

GCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC  >  NC_000913/3623345‑3623524

gcagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACgg                                                                                         <  2:5951865/93‑1 (MQ=255)

 cagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGc                                                                                        <  1:1204658/93‑1 (MQ=255)

 cagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGc                                                                                        <  1:6332831/93‑1 (MQ=255)

     gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgg                                                                                    >  1:3253704/1‑92 (MQ=255)

     gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgc                                                                                    >  1:3105917/1‑93 (MQ=255)

      cAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcg                                                                                   >  2:6050379/1‑93 (MQ=255)

       aaTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcgc                                                                                  >  2:4317616/1‑93 (MQ=255)

       aaTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTgcgc                                                                                  >  1:5638381/1‑93 (MQ=255)

        aTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGcgcg                                                                                 >  1:355678/1‑93 (MQ=255)

        aTGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGcgcg                                                                                 >  2:3279209/1‑93 (MQ=255)

          ggTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAg                                                                               >  1:5315462/1‑93 (MQ=255)

              aaaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTa                                                                           <  1:4089063/93‑1 (MQ=255)

               aaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTaa                                                                          >  1:749039/1‑93 (MQ=255)

               aaaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTaa                                                                          >  1:6980256/1‑93 (MQ=255)

                aaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAc                                                                         <  1:6493449/93‑1 (MQ=255)

                aaaTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAc                                                                         <  2:2085081/93‑1 (MQ=255)

                  aTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaa                                                                       >  1:7049577/1‑93 (MQ=255)

                   tGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaaa                                                                      >  2:7227347/1‑93 (MQ=255)

                   agcgcCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACaaa                                                                      <  1:2151007/92‑1 (MQ=255)

                    gcgcCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAg                                                                     <  2:2410757/93‑1 (MQ=255)

                      gccgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGCGGACGGCCTGGGCGCGGCTAGCAAAgtg                                                                   >  1:2105728/1‑93 (MQ=255)

                       ccgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgt                                                                  >  2:2487340/1‑93 (MQ=255)

                        cgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtg                                                                 >  2:3520275/1‑93 (MQ=255)

                        cgccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtg                                                                 >  1:6794514/1‑93 (MQ=255)

                         gccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAgtgtgt                                                                <  1:805487/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               >  2:4456735/1‑93 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  1:864874/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               >  2:2722032/1‑93 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  2:6687483/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtc                                                               <  2:5602560/93‑1 (MQ=255)

                          ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAAAAAAGTGTgtc                                                               >  1:3630159/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  1:4446680/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  2:2667533/1‑93 (MQ=255)

                            aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgt                                                             >  1:600501/1‑93 (MQ=255)

                             aTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTgtcgtc                                                            >  1:7686603/1‑93 (MQ=255)

                              ttGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGtcgtcg                                                           >  2:7415688/1‑93 (MQ=255)

                              ttGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGtcgtcg                                                           >  1:2437716/1‑93 (MQ=255)

                               tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCgg                                                          <  2:1575397/93‑1 (MQ=255)

                               tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCgg                                                          >  2:4147278/1‑93 (MQ=255)

                                  cATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCAt                                                       <  1:1137500/93‑1 (MQ=255)

                                   aTCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATg                                                      >  1:4504269/1‑93 (MQ=255)

                                   aTCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATg                                                      >  2:7553362/1‑93 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgt                                                     >  1:4199287/1‑92 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     >  2:5483238/1‑93 (MQ=255)

                                    tCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     >  2:5752926/1‑93 (MQ=255)

                                    acAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATgg                                                     <  1:5763289/92‑1 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    >  2:5199997/1‑93 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    <  2:4788673/93‑1 (MQ=255)

                                     cAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt                                                    <  2:6826360/93‑1 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTcg                                                  >  1:7082353/1‑92 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  >  2:6898730/1‑93 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  <  2:1200709/93‑1 (MQ=255)

                                       gCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa                                                  <  1:4980913/93‑1 (MQ=255)

                                          tCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               <  2:814530/93‑1 (MQ=255)

                                          tCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               >  1:1552819/1‑93 (MQ=255)

                                          gcAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCa                                               >  2:7025690/2‑93 (MQ=255)

                                           cAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCAt                                              <  2:3677670/93‑1 (MQ=255)

                                            aGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATa                                             >  1:2792328/1‑93 (MQ=255)

                                            aGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATa                                             <  1:1747820/93‑1 (MQ=255)

                                             gAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATaa                                            >  2:7119104/1‑93 (MQ=255)

                                             gAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATaa                                            >  2:5120678/1‑93 (MQ=255)

                                             gAAACTGCGGCCAGACGATTGCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGCGTCGTCGGCATGGTCAGAATaa                                            <  2:1486014/93‑1 (MQ=255)

                                              aaaCTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAAt                                           <  1:3900966/93‑1 (MQ=255)

                                                   gCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCt                                      >  1:348426/1‑93 (MQ=255)

                                                    cGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTg                                     >  2:2209969/1‑93 (MQ=255)

                                                     ggCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGc                                    >  2:3362907/1‑93 (MQ=255)

                                                     ggCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGc                                    >  1:4753806/1‑93 (MQ=255)

                                                       ccAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCAc                                  >  2:3100147/1‑93 (MQ=255)

                                                       ccAGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGGGTGTCGTCGGCATGGTCAGCGTAATCTCCTGCAc                                  >  1:1926479/1‑93 (MQ=255)

                                                         aGACGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCa                                >  2:4034173/1‑93 (MQ=255)

                                                           aCGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATc                              <  2:3818695/93‑1 (MQ=255)

                                                            cGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCt                             >  2:1115833/1‑93 (MQ=255)

                                                            cGATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCt                             <  1:4009652/93‑1 (MQ=255)

                                                             gATTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTAAGCATAATGTCCTGCACCATCTg                            >  2:5394511/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           >  2:6517432/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           <  2:2932641/93‑1 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           >  1:2664241/1‑93 (MQ=255)

                                                              aTTTCGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc                           <  1:1858465/93‑1 (MQ=255)

                                                                  cGAATCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCa                       <  2:6309579/93‑1 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCAtc                     >  2:1867069/1‑92 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATa                     <  2:3955905/93‑1 (MQ=255)

                                                                    aaTCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATa                     >  2:7626882/1‑93 (MQ=255)

                                                                      tCCGGCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACt                   <  2:202559/93‑1 (MQ=255)

                                                                         ggCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTc                >  1:2904263/1‑93 (MQ=255)

                                                                         ggCACCCCGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTc                <  2:5331651/93‑1 (MQ=255)

                                                                             ccccGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTcgcgc            <  1:4641807/93‑1 (MQ=255)

                                                                               ccGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcgg          >  1:2480396/1‑93 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  1:7831409/93‑1 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  1:978555/93‑1 (MQ=255)

                                                                                cGGTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggc         <  2:2550144/93‑1 (MQ=255)

                                                                                 ggTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggcg        >  1:1363365/1‑93 (MQ=255)

                                                                                  gTAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCgcggcgg       >  1:7287747/1‑92 (MQ=255)

                                                                                   tAGAGGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTg      >  1:5254286/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  1:3792245/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  2:4194259/1‑93 (MQ=255)

                                                                                     gagGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa    >  2:7069476/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   >  1:1043883/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   >  2:4933024/1‑93 (MQ=255)

                                                                                      agGACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGaa   <  2:1756490/93‑1 (MQ=255)

                                                                                       ggACGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAac  <  2:1305846/93‑1 (MQ=255)

GCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAAC  >  NC_000913/3623345‑3623524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`