BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	428,380	A→G	M504V (ATG→GTG)	secD →	SecD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	428,380	0	A	G	100.0%	927.7 / NA	288	M504V (ATG→GTG)	secD	SecD
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (146/142); total (146/142)

Only 100 of 298 total aligned reads displayed.

AGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGC  >  NC_000913/428291‑428469

agTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGc                                                                                        >  2:5877768/1‑93 (MQ=255)

 gTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGcc                                                                                       >  2:2254075/1‑93 (MQ=255)

 gTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGcc                                                                                       >  1:2809765/1‑93 (MQ=255)

    tGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAgg                                                                                    <  2:1045655/93‑1 (MQ=255)

    tGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAgg                                                                                    >  2:2602504/1‑93 (MQ=255)

      gTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTa                                                                                  <  2:2469605/93‑1 (MQ=255)

      gTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTa                                                                                  <  2:5498749/93‑1 (MQ=255)

       tCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGCCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTAt                                                                                 <  2:7116420/93‑1 (MQ=255)

          gATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATcgc                                                                              >  2:758866/1‑93 (MQ=255)

           aTTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATcgcg                                                                             >  1:6092024/1‑93 (MQ=255)

            ttGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCgg                                                                            >  2:2098625/1‑93 (MQ=255)

               cGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTa                                                                         <  2:2182147/93‑1 (MQ=255)

                gACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCCGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTAt                                                                        >  1:1756516/1‑93 (MQ=255)

                 aCCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATc                                                                       <  2:5566502/93‑1 (MQ=255)

                 aCCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATc                                                                       <  2:6341359/93‑1 (MQ=255)

                  ccAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCg                                                                      >  2:141154/1‑93 (MQ=255)

                   cAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGt                                                                     <  2:4581490/93‑1 (MQ=255)

                   cAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGt                                                                     >  1:1239893/1‑93 (MQ=255)

                     gTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCt                                                                   >  1:6337333/1‑93 (MQ=255)

                      tGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCtt                                                                  >  2:5195837/1‑93 (MQ=255)

                      tGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCtt                                                                  <  1:643359/93‑1 (MQ=255)

                      tGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCtt                                                                  <  1:3457421/93‑1 (MQ=255)

                      tGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCtt                                                                  >  2:4527162/1‑93 (MQ=255)

                      tGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCtt                                                                  >  2:4695012/1‑93 (MQ=255)

                       tctctGATTGCCAACTTGATCTTGATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTa                                                                 <  2:4278279/92‑1 (MQ=255)

                       gCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTa                                                                 <  2:5994475/93‑1 (MQ=255)

                        ctctGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTaa                                                                >  2:1106585/1‑93 (MQ=255)

                        ctctGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTaa                                                                >  1:7056296/1‑93 (MQ=255)

                          ctGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAAcc                                                              <  1:3773778/93‑1 (MQ=255)

                            gATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCt                                                            >  2:5321811/1‑93 (MQ=255)

                             aTTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGAATCGCGGGTATCGTCTTAACCCtt                                                           >  1:2347348/1‑93 (MQ=255)

                              ttGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTg                                                          >  1:6746124/1‑93 (MQ=255)

                              ttGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTg                                                          >  1:2587745/1‑93 (MQ=255)

                              ttGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTg                                                          >  2:6729706/1‑93 (MQ=255)

                              ttGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTg                                                          >  2:4019240/1‑93 (MQ=255)

                                gCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCg                                                        >  2:7699010/1‑93 (MQ=255)

                                 ccAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCgg                                                       >  1:5283943/1‑93 (MQ=255)

                                 ccAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCgg                                                       <  2:3108565/93‑1 (MQ=255)

                                  cAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCggg                                                      >  1:3847266/1‑92 (MQ=255)

                                  cAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGt                                                      <  2:1485184/93‑1 (MQ=255)

                                  cAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGt                                                      <  1:6156955/93‑1 (MQ=255)

                                  cAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGt                                                      <  1:5109300/93‑1 (MQ=255)

                                   aaCTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTg                                                     <  1:5426212/93‑1 (MQ=255)

                                    aCTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTgg                                                    >  2:7561240/1‑93 (MQ=255)

                                    aCTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTCCGGTgg                                                    >  1:2884288/1‑93 (MQ=255)

                                     cTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTggg                                                   >  1:5905204/1‑92 (MQ=255)

                                      ttGGTCTTAATCGTCGGCATTATGTCGCTGTTGCCATGCGCAACGCTGAGTGTGCCAGGTATCGCGGGAATCGTCTTAACCCTTGCGGTGGCg                                                  >  1:1875005/1‑93 (MQ=255)

                                      ttGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCg                                                  >  2:3368453/1‑93 (MQ=255)

                                       tGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCgg                                                 >  1:3385781/1‑93 (MQ=255)

                                        gATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGt                                                <  2:5454939/93‑1 (MQ=255)

                                        gATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGt                                                <  2:3560846/93‑1 (MQ=255)

                                          tCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCg                                              >  2:3185584/1‑93 (MQ=255)

                                           cTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGa                                             <  2:4170949/93‑1 (MQ=255)

                                            ttAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGAt                                            >  1:827158/1‑93 (MQ=255)

                                                tcgtcgGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGa                                        >  1:4765967/1‑93 (MQ=255)

                                                tcgtcgGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGa                                        >  1:3221413/1‑93 (MQ=255)

                                                 cgtcgGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGaa                                       <  1:1932416/93‑1 (MQ=255)

                                                  gtcgGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAAc                                      <  1:3503372/93‑1 (MQ=255)

                                                    cgGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGt                                    >  2:6476930/1‑93 (MQ=255)

                                                     ggCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTa                                   <  2:5350186/93‑1 (MQ=255)

                                                     ggCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTa                                   <  1:782598/93‑1 (MQ=255)

                                                     ggCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTa                                   <  2:7532928/93‑1 (MQ=255)

                                                      gCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTAc                                  >  1:7518695/1‑93 (MQ=255)

                                                      gCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTAc                                  <  1:6537421/93‑1 (MQ=255)

                                                        aTTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTg                                >  1:4827767/1‑93 (MQ=255)

                                                        aTTATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTg                                >  1:4408533/1‑93 (MQ=255)

                                                         ttATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGa                               <  1:7710409/93‑1 (MQ=255)

                                                         ttATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGa                               <  2:4447340/93‑1 (MQ=255)

                                                         ttATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGa                               >  1:1470821/1‑93 (MQ=255)

                                                          tATGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGAt                              <  2:1529746/93‑1 (MQ=255)

                                                            tGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCa                            <  2:1790180/93‑1 (MQ=255)

                                                            tGTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCa                            >  2:5061546/1‑93 (MQ=255)

                                                             gTCGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaa                           >  2:5675368/1‑93 (MQ=255)

                                                               cGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacg                         <  2:2875482/93‑1 (MQ=255)

                                                               cGCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacg                         <  1:3071028/93‑1 (MQ=255)

                                                                gCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacga                        <  1:6676048/93‑1 (MQ=255)

                                                                gCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacga                        >  2:7184575/1‑93 (MQ=255)

                                                                gCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacga                        <  2:3815314/93‑1 (MQ=255)

                                                                gCTGTTGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCaacga                        <  2:6826213/93‑1 (MQ=255)

                                                                     tGCCAGGCGCACCGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGACCGTACTGATCAACGAACGTa                   <  2:6584808/93‑1 (MQ=255)

                                                                     tGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTa                   <  1:469250/93‑1 (MQ=255)

                                                                     tGCCAGGCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTa                   >  1:5750596/1‑93 (MQ=255)

                                                                          ggCGCAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTaaa              <  1:6851883/93‑1 (MQ=255)

                                                                           gcgcAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaag             <  1:5517149/93‑1 (MQ=255)

                                                                           gcgcAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaag             <  1:6899297/93‑1 (MQ=255)

                                                                            cgcAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaaga            <  2:7798794/93‑1 (MQ=255)

                                                                             gcAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaagaa           <  1:2186245/93‑1 (MQ=255)

                                                                              cAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaagaag          >  2:2754549/1‑93 (MQ=255)

                                                                              cAACGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAaagaag          <  2:1978833/93‑1 (MQ=255)

                                                                               aaCGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAagaaga         >  2:3859587/1‑93 (MQ=255)

                                                                               aaCGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAagaaga         <  2:2884126/93‑1 (MQ=255)

                                                                                aCGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAagag        <  1:4352621/93‑1 (MQ=255)

                                                                                aCGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAagag        >  1:7334874/1‑93 (MQ=255)

                                                                                 cGCTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGt       >  1:5351708/1‑93 (MQ=255)

                                                                                   cTGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTg     <  1:2914271/93‑1 (MQ=255)

                                                                                    tGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGa    >  2:1390279/1‑93 (MQ=255)

                                                                                    tGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGa    <  1:7923769/93‑1 (MQ=255)

                                                                                    tGAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGa    >  1:2859394/1‑93 (MQ=255)

                                                                                     gAGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAg   >  2:7868762/1‑93 (MQ=255)

                                                                                      aGTGTGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGc  <  1:3833579/93‑1 (MQ=255)

AGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGC  >  NC_000913/428291‑428469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`