BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,863,429	T→C	M158V (ATG→GTG)	yidE ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,863,429	0	T	C	100.0%	1234.6 / NA	387	M158V (ATG→GTG)	yidE	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (220/167); total (220/167)

Only 100 of 391 total aligned reads displayed.

TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC  >  NC_000913/3863339‑3863518

  tcGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACcccc                                                                                       >  1:1341833/1‑93 (MQ=255)

    gACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCGAt                                                                                     >  2:2596254/1‑93 (MQ=255)

    gACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCAt                                                                                     <  2:4084453/93‑1 (MQ=255)

     aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc                                                                                    <  1:5773622/93‑1 (MQ=255)

     aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc                                                                                    >  2:1160827/1‑93 (MQ=255)

     aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc                                                                                    <  1:6816602/93‑1 (MQ=255)

     aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc                                                                                    <  2:7637360/93‑1 (MQ=255)

       aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg                                                                                  <  1:1504874/93‑1 (MQ=255)

       aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg                                                                                  >  1:4998370/1‑93 (MQ=255)

        ttGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGa                                                                                 >  1:7663774/1‑93 (MQ=255)

         tGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAt                                                                                <  2:1426458/93‑1 (MQ=255)

         tGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAt                                                                                <  2:1730157/93‑1 (MQ=255)

         tGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAt                                                                                <  1:3617333/93‑1 (MQ=255)

          gACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATc                                                                               >  2:7309207/1‑93 (MQ=255)

          gACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATc                                                                               <  2:5812261/93‑1 (MQ=255)

            cgcgGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGa                                                                             >  2:2193432/1‑93 (MQ=255)

              cgGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGAcc                                                                           <  2:6290238/93‑1 (MQ=255)

               ggAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCa                                                                          >  1:3656160/1‑93 (MQ=255)

                gAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACGCACCCCCATCTGATCGACCAt                                                                         <  2:7790968/93‑1 (MQ=255)

                  aaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAttt                                                                       <  1:4185345/93‑1 (MQ=255)

                   aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTc                                                                      >  1:1148965/1‑93 (MQ=255)

                    aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc                                                                     >  2:4891297/1‑93 (MQ=255)

                      aaCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAt                                                                   >  2:189898/1‑93 (MQ=255)

                      aaCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAt                                                                   <  1:2878888/93‑1 (MQ=255)

                       aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt                                                                  <  1:6151433/93‑1 (MQ=255)

                       aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt                                                                  >  1:4593314/1‑93 (MQ=255)

                        cccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTg                                                                 >  2:6742563/1‑93 (MQ=255)

                         ccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTgg                                                                >  1:7117622/1‑93 (MQ=255)

                         ccGCAACATCCACATGGGGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTgg                                                                >  2:2548487/1‑93 (MQ=255)

                            cAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgtgt                                                             <  1:48285/93‑1 (MQ=255)

                             aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa                                                            <  2:2139049/93‑1 (MQ=255)

                             aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa                                                            <  1:4494976/93‑1 (MQ=255)

                             aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa                                                            >  1:523133/1‑93 (MQ=255)

                             aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa                                                            >  1:7158930/1‑93 (MQ=255)

                              aCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAc                                                           >  2:4673403/1‑93 (MQ=255)

                              aCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAc                                                           <  1:4048287/93‑1 (MQ=255)

                               cATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAcc                                                          >  1:1909081/1‑93 (MQ=255)

                               cATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAcc                                                          >  2:3102476/1‑93 (MQ=255)

                                aTCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCCTCTGATCGACCATTTCCATTGGTGTAccc                                                         <  1:6594711/93‑1 (MQ=255)

                                aTCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAccc                                                         <  1:5335807/93‑1 (MQ=255)

                                 tCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCa                                                        >  1:1107365/1‑93 (MQ=255)

                                  ccACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAg                                                       <  1:832228/93‑1 (MQ=255)

                                  ccACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAg                                                       <  1:7218261/93‑1 (MQ=255)

                                    acaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGt                                                     <  1:5427283/93‑1 (MQ=255)

                                     caTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTc                                                    <  1:4733497/93‑1 (MQ=255)

                                      aTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcg                                                   >  2:2294375/1‑93 (MQ=255)

                                      aTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcg                                                   >  2:2958205/1‑93 (MQ=255)

                                      aTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcg                                                   >  1:2392470/1‑93 (MQ=255)

                                       tGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgc                                                  >  2:4573026/1‑93 (MQ=255)

                                         gTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGCCgcgc                                                >  2:5402727/1‑93 (MQ=255)

                                           gAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaa                                              >  1:2139462/1‑93 (MQ=255)

                                            aaCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGCCCATTTCCATTGGTGTACCCAGGTCGCGCaaa                                             <  1:2594600/93‑1 (MQ=255)

                                            aaCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaa                                             >  1:2779564/1‑93 (MQ=255)

                                               aaaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc                                          <  1:250217/93‑1 (MQ=255)

                                               aaaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc                                          >  1:6110303/1‑93 (MQ=255)

                                               aaaaTCCCGCAAATGCAGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc                                          <  1:7025676/93‑1 (MQ=255)

                                                aaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCGCCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATct                                         <  2:1055868/93‑1 (MQ=255)

                                                aaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATct                                         >  1:3998702/1‑93 (MQ=255)

                                                  aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc                                       <  1:1716198/93‑1 (MQ=255)

                                                     ccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCtgctgc                                    <  2:896735/93‑1 (MQ=255)

                                                     ccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCtgctgc                                    >  1:7523925/1‑93 (MQ=255)

                                                       gCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccc                                  <  1:3760338/93‑1 (MQ=255)

                                                        cAAATTCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct                                 <  2:6067936/93‑1 (MQ=255)

                                                        cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct                                 <  2:7430398/93‑1 (MQ=255)

                                                        cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct                                 <  2:667541/93‑1 (MQ=255)

                                                          aaTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc                               <  2:6444345/93‑1 (MQ=255)

                                                          aaTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc                               <  2:4228506/93‑1 (MQ=255)

                                                          aaTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc                               >  1:7841508/1‑93 (MQ=255)

                                                           aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc                              <  1:3532485/93‑1 (MQ=255)

                                                           aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc                              <  2:3956511/93‑1 (MQ=255)

                                                           aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc                              >  2:3826205/1‑93 (MQ=255)

                                                           aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc                              >  2:6908483/1‑93 (MQ=255)

                                                               cGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCa                          >  2:3558711/1‑93 (MQ=255)

                                                               cGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCa                          >  1:5694700/1‑93 (MQ=255)

                                                                 aaTGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc                        <  2:5123099/93‑1 (MQ=255)

                                                                   tGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgcgc                      >  2:3324077/1‑93 (MQ=255)

                                                                   tGGATACGCCATCGCGTAACTCACCCCCATCTAATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgcgc                      <  2:4390405/93‑1 (MQ=255)

                                                                    ggATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCt                     <  2:1008968/93‑1 (MQ=255)

                                                                    ggATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCt                     >  2:2717689/1‑93 (MQ=255)

                                                                    ggATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCt                     >  1:326312/1‑93 (MQ=255)

                                                                     gATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTACATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTg                    >  2:5529790/1‑93 (MQ=255)

                                                                       tACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGc                  >  2:3471150/1‑93 (MQ=255)

                                                                       tACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGc                  >  2:7214446/1‑93 (MQ=255)

                                                                       tACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGc                  >  1:3096070/1‑93 (MQ=255)

                                                                         ccccATCGCGTAACTCCCCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGt                <  1:2656613/91‑1 (MQ=255)

                                                                           ccATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAt              <  1:6412120/93‑1 (MQ=255)

                                                                           ccATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAt              >  1:1081322/1‑93 (MQ=255)

                                                                            cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt             >  1:1433256/1‑93 (MQ=255)

                                                                             aTCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTg            <  1:154987/93‑1 (MQ=255)

                                                                              tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg           >  2:2483150/1‑93 (MQ=255)

                                                                              tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg           >  2:1627455/1‑93 (MQ=255)

                                                                              tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg           >  2:706212/1‑93 (MQ=255)

                                                                              tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg           >  1:444024/1‑93 (MQ=255)

                                                                              tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg           >  1:6274202/1‑93 (MQ=255)

                                                                                  gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc       <  2:3729291/93‑1 (MQ=255)

                                                                                  gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc       <  1:7374265/93‑1 (MQ=255)

                                                                                    aaCTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCg     >  2:1359053/1‑93 (MQ=255)

                                                                                    aaCTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCg     >  2:1219407/1‑93 (MQ=255)

                                                                                      cTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCa   <  1:2266507/93‑1 (MQ=255)

                                                                                       tCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAc  <  1:3333664/93‑1 (MQ=255)

TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC  >  NC_000913/3863339‑3863518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`