| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 442,390 | C→T | G159D (GGT→GAT) | thiJ ← | 4‑methyl‑5(beta‑hydroxyethyl)‑thiazole monophosphate synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 442,390 | 0 | C | T | 99.7% | 1057.3 / ‑5.8 | 293 | G159D (GGT→GAT) | thiJ | 4‑methyl‑5(beta‑hydroxyethyl)‑thiazole monophosphate synthesis |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (192/100); total (193/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
GCCGCCATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTACCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCAGC > NC_000913/442300‑442479 | gccATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGc > 1:388495/1‑93 (MQ=255) ccATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcc > 1:7752313/1‑93 (MQ=255) ccATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcc > 2:4412871/1‑93 (MQ=255) ccATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcc > 2:2003923/1‑93 (MQ=255) ccATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcc > 2:1881068/1‑93 (MQ=255) cATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTGTCCGGccc > 1:7117262/1‑93 (MQ=255) cATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGccc < 2:243544/93‑1 (MQ=255) cATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGccc > 2:4173219/1‑93 (MQ=255) aTCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcccc > 1:6251970/1‑93 (MQ=255) aTCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcccc < 2:6852156/93‑1 (MQ=255) aTCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcccc < 2:5781753/93‑1 (MQ=255) aTCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGcccc > 1:4547959/1‑93 (MQ=255) tCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCct > 1:7239102/1‑93 (MQ=255) cACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctg < 1:6166843/93‑1 (MQ=255) cACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctg < 1:6570123/93‑1 (MQ=255) cACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctg > 2:3503804/1‑93 (MQ=255) aCCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctgg < 2:6449507/93‑1 (MQ=255) ccAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctggc > 1:285231/1‑93 (MQ=255) cAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctggct > 1:5135054/1‑93 (MQ=255) aGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCctggctg < 2:7274845/93‑1 (MQ=255) ttGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATCGCTGTATCCGGCCCCTGGCTGGt > 2:4282926/1‑93 (MQ=255) ttGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGt > 1:139340/1‑93 (MQ=255) tgtgATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTc < 2:4583465/93‑1 (MQ=255) gtgATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCa > 2:2808467/1‑93 (MQ=255) gtgATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCa < 1:261059/93‑1 (MQ=255) tgATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAg > 1:245051/1‑93 (MQ=255) gATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGc < 1:1881251/93‑1 (MQ=255) aTGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCa > 1:2940449/1‑93 (MQ=255) tGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCaa > 2:1592734/1‑93 (MQ=255) gCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAAt < 1:7552780/93‑1 (MQ=255) gCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAAt > 2:6493047/1‑93 (MQ=255) aCTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAAtttt > 1:4198138/1‑93 (MQ=255) cTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTa > 2:7140807/1‑93 (MQ=255) cATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTAccc > 1:7414110/1‑93 (MQ=255) ggtcTTTTTCACGCCCAACCAACAGGTCGATAATTTCCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTg < 1:6943601/90‑1 (MQ=255) ggCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCATCAATTTTACCCGTGc < 2:5388987/93‑1 (MQ=255) ggCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGc < 1:1974026/93‑1 (MQ=255) ggCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGc < 1:5293529/93‑1 (MQ=255) gCTTTTTCTCGCCCAAACAACAGTTCGATAATTTTCAGACCAAAGTCTATAGCTGTATCCGGCCCCCGGCTGGTCAGCAATTTTAACCGTGCa < 2:1692518/93‑1 (MQ=255) gCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCa > 1:6386782/1‑93 (MQ=255) gCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCa > 1:39583/1‑93 (MQ=255) gCTTTTCCACGCCCAGCCAACGGGTCGATAATTGTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCa < 1:6799089/93‑1 (MQ=255) ttttCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATcc > 2:2667512/1‑93 (MQ=255) tttCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATccc < 2:6373928/93‑1 (MQ=255) ttCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCa < 2:4729163/93‑1 (MQ=255) cACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAga < 2:3272142/93‑1 (MQ=255) cACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAga < 1:3670147/93‑1 (MQ=255) aCGCCCAACCAACAGGTCGATAGTTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAgac > 2:4978146/1‑93 (MQ=255) aCGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCacac < 1:2037227/93‑1 (MQ=255) gCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAgacga > 2:6595877/1‑93 (MQ=255) cccAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAgacgac < 2:7625300/93‑1 (MQ=255) caaccaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGAcgc < 2:7463486/93‑1 (MQ=255) accaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACgcgc < 1:5467934/93‑1 (MQ=255) accaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACgcgc < 1:1548065/93‑1 (MQ=255) ccaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCt < 2:4690842/93‑1 (MQ=255) ccaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCt > 2:7748276/1‑93 (MQ=255) ccaacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCt > 1:2315296/1‑93 (MQ=255) caacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCtt < 1:7165295/93‑1 (MQ=255) caacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCtt > 1:667782/1‑93 (MQ=255) caacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCtt > 1:5507372/1‑93 (MQ=255) cacAGGTCGATAATTTTCAGACCAAAGTCGATACCTGTATCCGGCCCCTGGCTTGTCAGCAATTTTTCCCGTGCATCCCAGACGACGCGCTTg < 2:6072136/92‑1 (MQ=255) aacAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTg > 1:7686661/1‑93 (MQ=255) cAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTc > 1:437930/1‑93 (MQ=255) ggTCGATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCa < 1:5364817/93‑1 (MQ=255) gATAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCa > 2:1239307/1‑93 (MQ=255) aTAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCAt > 2:2982493/1‑93 (MQ=255) tAATTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCCGCCAtt > 2:7302484/1‑93 (MQ=255) aaTTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTg < 2:5632926/93‑1 (MQ=255) aTTTTCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGt < 2:6765308/93‑1 (MQ=255) ttttCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCTCAGACGACGCGCTTGTCCAGCCATTGtt > 1:4726718/1‑93 (MQ=255) ttttCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGtt > 2:6027223/1‑93 (MQ=255) ttttCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGtt < 1:3381162/93‑1 (MQ=255) ttttCAGACCAAAGTCGATAGCTGTATCCGGCACCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGtt > 2:5416168/1‑93 (MQ=255) tttCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTc < 1:6445841/93‑1 (MQ=255) tttCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTc < 1:7387676/93‑1 (MQ=255) tCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTcgg > 1:5863498/1‑93 (MQ=255) tCAGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTcgg > 1:5932310/1‑93 (MQ=255) aGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTcggcg > 1:1246601/1‑93 (MQ=255) aGACCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTcggcg < 1:901966/93‑1 (MQ=255) aCCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCggg > 2:4103494/1‑93 (MQ=255) aCCAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCggg > 1:4333327/1‑93 (MQ=255) ccAAAGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGa > 2:2230435/1‑93 (MQ=255) aaaGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAAt > 2:2879146/1‑93 (MQ=255) aGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAAttt > 1:7928299/1‑93 (MQ=255) aGTCGATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAAttt < 1:4798982/93‑1 (MQ=255) gATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTc > 2:3659549/1‑93 (MQ=255) gATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTc < 1:5993199/93‑1 (MQ=255) gATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTc > 1:5746189/1‑93 (MQ=255) gATAGCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTc > 1:1119926/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTc > 2:1472429/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTc > 2:4009325/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTc > 2:4365330/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTc > 1:581994/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTATTTc > 1:2864206/1‑93 (MQ=255) gCTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGACGGGAATTTTGTCTTTc > 2:4009329/1‑93 (MQ=255) cTGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCa < 2:5213893/93‑1 (MQ=255) tGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCAg > 2:3744866/1‑93 (MQ=255) tGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCAg < 1:1494781/93‑1 (MQ=255) tGTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGGCTTTCAg > 2:808559/1‑93 (MQ=255) gTATCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCAGc > 1:1762390/1‑93 (MQ=255) | GCCGCCATCACCAGTTGTGATGCCACTTCATGGGCTTTTTCACGCCCAACCAACAGGTCGATAATTTTCAGACCAAAGTCGATAGCTGTACCCGGCCCCTGGCTGGTCAGCAATTTTACCCGTGCATCCCAGACGACGCGCTTGTCCAGCCATTGTTCGGCGGGAATTTTGTCTTTCAGC > NC_000913/442300‑442479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |