BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,938,374	C→T	D145N (GAC→AAC)	yiePs ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,938,374	0	C	T	99.8%	1704.6 / NA	466	D145N (GAC→AAC)	yiePs	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (221/244); minor base G (0/1); total (221/245)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 474 total aligned reads displayed.

GCGCCTGACAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTCGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCATAGA  >  NC_000913/3938284‑3938463

   ccTGACAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTgg                                                                                      <  1:4304252/93‑1 (MQ=255)

    cTGACAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGt                                                                                     >  1:7255301/1‑93 (MQ=255)

      gACAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTaa                                                                                   >  1:4841112/1‑93 (MQ=255)

       gcAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAAt                                                                                  <  1:6723373/92‑1 (MQ=255)

       aCAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAAt                                                                                  >  2:3381089/1‑93 (MQ=255)

       aCAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAAt                                                                                  <  1:2461500/93‑1 (MQ=255)

        cAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAAtt                                                                                 <  1:6776141/93‑1 (MQ=255)

        cAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAAtt                                                                                 <  1:3324536/93‑1 (MQ=255)

         aaGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTg                                                                                >  1:7902454/1‑93 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               >  1:1182941/1‑93 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               >  2:7835082/1‑93 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               <  2:6474445/93‑1 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               <  2:3757981/93‑1 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               <  1:4583745/93‑1 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               >  1:4015893/1‑93 (MQ=255)

          aGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGa                                                                               <  1:1767635/93‑1 (MQ=255)

           gCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGAc                                                                              <  1:3636378/93‑1 (MQ=255)

            cTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACg                                                                             >  2:850179/1‑93 (MQ=255)

             tttAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGt                                                                            <  2:1926435/93‑1 (MQ=255)

              ttAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTg                                                                           >  2:2436851/1‑93 (MQ=255)

               tAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGa                                                                          <  2:6750692/93‑1 (MQ=255)

                aaaTGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGaa                                                                         <  2:5853107/93‑1 (MQ=255)

                 aaTGCCGCGTCGCCATCGCTTTGGCTAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGAGATTGACGTGaag                                                                        >  1:933020/1‑93 (MQ=255)

                  aTGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGaagt                                                                       >  2:1198323/1‑93 (MQ=255)

                   tGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGaagta                                                                      <  2:6183605/93‑1 (MQ=255)

                     ccGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGaagtaag                                                                    >  1:1225531/1‑93 (MQ=255)

                     ccGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGaagtaag                                                                    >  2:6072549/1‑93 (MQ=255)

                        catCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAgtgt                                                                 <  2:3017694/91‑1 (MQ=255)

                          tCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTACGTGTGa                                                               >  1:6540915/1‑93 (MQ=255)

                          tCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGa                                                               >  1:2389170/1‑93 (MQ=255)

                          gcGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGa                                                               <  2:6899439/92‑1 (MQ=255)

                            gCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATa                                                             >  1:217787/1‑93 (MQ=255)

                            gCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATa                                                             <  1:3172422/93‑1 (MQ=255)

                              cATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATaaa                                                           <  2:4382784/93‑1 (MQ=255)

                              cATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATaaa                                                           >  1:2807863/1‑93 (MQ=255)

                              cATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATaaa                                                           <  1:7714958/93‑1 (MQ=255)

                               aTCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTTTCACTTTTTTTCTGGGAATTTACTGGGAGAAAGGGTGTTaaaa                                                          >  2:6545729/1‑92 (MQ=255)

                                tCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAAcc                                                         <  2:3472368/93‑1 (MQ=255)

                                tCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAAca                                                         >  1:5676784/1‑92 (MQ=255)

                                tCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGAGTGATAAAcc                                                         >  2:5486177/1‑93 (MQ=255)

                                   cTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGaa                                                      <  2:7434388/93‑1 (MQ=255)

                                   cTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGaa                                                      >  2:2159019/1‑93 (MQ=255)

                                   cTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGaa                                                      <  1:5619445/93‑1 (MQ=255)

                                        gATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGaa                                                 >  1:1998168/1‑93 (MQ=255)

                                        gATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGaa                                                 <  2:4526612/93‑1 (MQ=255)

                                         aTAATCGCATCGATAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAAt                                                >  2:1718444/1‑93 (MQ=255)

                                          tAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATa                                               <  1:155792/93‑1 (MQ=255)

                                          tAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATa                                               <  1:5507548/93‑1 (MQ=255)

                                          tAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATa                                               <  2:3699345/93‑1 (MQ=255)

                                          tAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATa                                               >  1:2670165/1‑93 (MQ=255)

                                          tAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATa                                               >  1:3474742/1‑93 (MQ=255)

                                             tCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCg                                            >  2:5076906/1‑93 (MQ=255)

                                                 aTCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATGAACCGAATGGAATAGCGAggg                                        >  1:5796125/1‑92 (MQ=255)

                                                 aTCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGc                                        <  2:6364342/93‑1 (MQ=255)

                                                  tCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATGGCGAGGCg                                       >  2:980996/1‑93 (MQ=255)

                                                  tCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCg                                       >  2:152183/1‑93 (MQ=255)

                                                    gACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGaa                                     >  2:2041407/1‑93 (MQ=255)

                                                    gACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGaa                                     <  2:328969/93‑1 (MQ=255)

                                                    gACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGaa                                     <  2:2940762/93‑1 (MQ=255)

                                                      cAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATg                                   >  1:4403637/1‑93 (MQ=255)

                                                      cAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATg                                   >  1:6648626/1‑93 (MQ=255)

                                                       aaTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGa                                  <  1:4704622/93‑1 (MQ=255)

                                                       aaTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGa                                  >  1:1415298/1‑93 (MQ=255)

                                                       aaTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGa                                  <  1:164350/93‑1 (MQ=255)

                                                       aaTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGa                                  <  1:3793087/93‑1 (MQ=255)

                                                       aaTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGa                                  >  1:474934/1‑93 (MQ=255)

                                                        aTCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAg                                 >  2:278504/1‑93 (MQ=255)

                                                         tCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAgg                                <  2:4610913/93‑1 (MQ=255)

                                                         tCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAgg                                <  1:6272531/93‑1 (MQ=255)

                                                         tCGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAgg                                <  2:4182888/93‑1 (MQ=255)

                                                          cGCCTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGt                               >  1:6034930/1‑93 (MQ=255)

                                                            ccTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCa                             <  1:5133953/93‑1 (MQ=255)

                                                            ccTGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCa                             >  1:1027819/1‑93 (MQ=255)

                                                              tGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaa                           <  2:5204423/93‑1 (MQ=255)

                                                              tGATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaa                           >  1:1505126/1‑93 (MQ=255)

                                                               gATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaaa                          >  2:3243039/1‑93 (MQ=255)

                                                               gATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaaa                          <  2:3063715/93‑1 (MQ=255)

                                                               gATGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaaa                          >  1:3527625/1‑93 (MQ=255)

                                                                aTGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCaaaaa                         >  2:5357405/1‑93 (MQ=255)

                                                                 tGCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAAc                        >  2:4343602/1‑93 (MQ=255)

                                                                  gCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACg                       >  1:1329393/1‑93 (MQ=255)

                                                                  gCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACg                       >  2:2540680/1‑93 (MQ=255)

                                                                  gCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACg                       >  2:7004138/1‑93 (MQ=255)

                                                                  gCAGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACg                       <  1:7522535/93‑1 (MQ=255)

                                                                    aGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGa                     <  1:642118/93‑1 (MQ=255)

                                                                    aGATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGa                     <  2:4873768/93‑1 (MQ=255)

                                                                     gATCCAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGAt                    >  1:2951716/1‑93 (MQ=255)

                                                                      aTCCGGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGAtt                   <  1:7341358/93‑1 (MQ=255)

                                                                        ccAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTgg                 <  2:7728739/93‑1 (MQ=255)

                                                                         cAGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGgc                <  1:6123038/93‑1 (MQ=255)

                                                                          aGCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGgcg               <  2:3828628/93‑1 (MQ=255)

                                                                           gCTTTATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGgcgc              >  2:3947443/1‑93 (MQ=255)

                                                                             tttATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTc            <  1:5930388/93‑1 (MQ=255)

                                                                               tATCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCAt          >  1:4974318/1‑93 (MQ=255)

                                                                                aTCACTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCAtt         <  2:624552/93‑1 (MQ=255)

                                                                                   aCTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCa      <  2:2717528/93‑1 (MQ=255)

                                                                                   aCTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCa      <  2:7140573/93‑1 (MQ=255)

                                                                                   aCTGTGTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCa      <  1:6904439/93‑1 (MQ=255)

                                                                                     tgtgTTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCATa    <  1:5392621/93‑1 (MQ=255)

                                                                                      gtgtTGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCATAg   >  2:5745664/1‑93 (MQ=255)

GCGCCTGACAAGCTTTAAATGCCGCGTCGCCATCGCTTTGGATAATCGCATCGACAATCGCCTGATGCAGATCCAGCTTTATCACTGTGTCGCTGGTAATTGACGTGAAGTAAGTGTGATAAACCGAATGGAATAGCGAGGCGAATGAGGTCAAAAACGGATTGGCGCTCATTTCATAGA  >  NC_000913/3938284‑3938463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`