Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,991,607 G→A D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY ←
b3808 →
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,991,6070GA99.8% 1492.4 / ‑6.0 415D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY
b3808
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (207/207);  total (207/208)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

Only 100 of 440 total aligned reads displayed.

GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696
                                                                                          |                                                                                         
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         >  2:4188052/1‑93 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     <  1:4046735/93‑1 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     >  1:2393523/1‑93 (MQ=255)
     tAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGc                                                                                    >  1:7773573/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   >  2:4436825/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   >  2:6087162/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTAAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   >  1:4131584/1‑93 (MQ=255)
       aTGATTTTGCTGCCCCTCTCAAAGGTAATGGTCAGTGCGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCCTCCCAGTCATCCAGGCGt                                                                                  <  2:6018911/93‑1 (MQ=255)
       aTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGt                                                                                  >  2:3196609/1‑93 (MQ=255)
        tGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt                                                                                 <  2:3033540/93‑1 (MQ=255)
           ttttGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttctt                                                                              >  1:6177133/1‑93 (MQ=255)
              tgctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCaa                                                                           <  2:3928362/93‑1 (MQ=255)
               gctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAAt                                                                          >  1:5193132/1‑93 (MQ=255)
                ctgcCCCTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATg                                                                         <  1:2218327/93‑1 (MQ=255)
                  tccACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGt                                                                       <  2:1209844/92‑1 (MQ=255)
                   ccACTCTCAAAGGGAATGGTCAGCACGCCGCCGTTGATTTCGCAGTCGATATCCCTGTCGCCATCCCAGCTATCCGGGCGATCTTCAATGGta                                                                      >  1:1326343/1‑92 (MQ=255)
                      ctctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGc                                                                   >  1:6734684/2‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  2:6450926/1‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  1:2451787/1‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  2:2919105/1‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  1:6619138/1‑93 (MQ=255)
                         tcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCag                                                                >  1:5544134/1‑93 (MQ=255)
                         tcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCag                                                                >  2:7544761/1‑93 (MQ=255)
                          cAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCaga                                                               >  1:6500481/1‑93 (MQ=255)
                           aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCagag                                                              <  1:1119640/93‑1 (MQ=255)
                           aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCagag                                                              <  2:162470/93‑1 (MQ=255)
                            aaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGt                                                             >  2:263671/1‑93 (MQ=255)
                              ggTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTg                                                           <  1:36729/93‑1 (MQ=255)
                               gTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGa                                                          <  1:3356213/93‑1 (MQ=255)
                                tAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGAt                                                         <  1:5099596/93‑1 (MQ=255)
                                 aaTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATc                                                        >  1:6840727/1‑93 (MQ=255)
                                 aaTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATc                                                        >  2:557264/1‑93 (MQ=255)
                                  aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                       <  1:4210517/93‑1 (MQ=255)
                                  aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                       >  2:7456082/1‑93 (MQ=255)
                                   tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAg                                                      >  1:847213/1‑93 (MQ=255)
                                    ggTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCTGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGc                                                     <  1:3266414/93‑1 (MQ=255)
                                    ggTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGc                                                     <  1:4619277/93‑1 (MQ=255)
                                     gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                    <  2:4332034/93‑1 (MQ=255)
                                      ccAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTCTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGccg                                                   >  2:1781827/2‑92 (MQ=255)
                                       cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                  >  1:3817535/1‑93 (MQ=255)
                                        aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                 >  2:7807558/1‑93 (MQ=255)
                                         gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                >  1:1469491/1‑93 (MQ=255)
                                         gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                >  1:5400193/1‑93 (MQ=255)
                                         gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                >  1:5246541/1‑93 (MQ=255)
                                           aCGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGa                                              <  2:1998320/93‑1 (MQ=255)
                                            cgccgcCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAt                                             <  2:1125114/93‑1 (MQ=255)
                                            cgccgcCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAt                                             <  1:1613107/93‑1 (MQ=255)
                                             gccgccGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                            >  1:302139/1‑93 (MQ=255)
                                               cgccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGTCAGGCGATGaa                                          >  2:3526054/1‑93 (MQ=255)
                                                  cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                       >  1:75284/1‑93 (MQ=255)
                                                  cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                       <  1:4844077/93‑1 (MQ=255)
                                                  cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                       >  2:384042/1‑93 (MQ=255)
                                                   gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                      >  2:6284008/1‑93 (MQ=255)
                                                   gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                      >  2:691081/1‑93 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     <  2:1947681/93‑1 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     <  2:5127317/93‑1 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCAGCCAGGCGTTCTTCAATGGTCATCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     >  2:7861535/1‑93 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  2:6558607/93‑1 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   <  1:3202253/93‑1 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   >  2:2665751/1‑93 (MQ=255)
                                                       aTTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTg                                  >  1:6985900/1‑93 (MQ=255)
                                                       aTTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTg                                  <  1:3459014/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGt                                 <  1:4365622/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGt                                 <  2:4905850/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGt                                 >  1:628668/1‑93 (MQ=255)
                                                         ttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTc                                <  2:4663957/93‑1 (MQ=255)
                                                          tCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCg                               >  2:529962/1‑93 (MQ=255)
                                                           cGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGt                              <  2:2344733/93‑1 (MQ=255)
                                                           cGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGt                              <  2:2178411/93‑1 (MQ=255)
                                                           cGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGt                              <  1:959598/93‑1 (MQ=255)
                                                            gCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGtt                             >  1:6920036/1‑93 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          <  2:2548881/93‑1 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          >  1:6418057/1‑93 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          >  1:7221991/1‑93 (MQ=255)
                                                                tCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGACCAGCCAGGCGATGAAATTCACTGTCGTTCAtt                         <  2:6501194/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  1:7392012/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  1:712666/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  1:5829465/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCAACCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       >  2:5218301/1‑93 (MQ=255)
                                                                    tatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                     <  2:4539497/93‑1 (MQ=255)
                                                                     atCGCTGTCGCCATCCCAGTCATCCCGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                    <  1:6069127/93‑1 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   >  2:3623300/1‑93 (MQ=255)
                                                                       cGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTAt                  <  2:1479161/93‑1 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATcc                >  2:1222039/1‑93 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGACAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATcc                <  1:1009444/93‑1 (MQ=255)
                                                                            tCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGt             >  2:7306639/1‑93 (MQ=255)
                                                                             cGCCAGCCCGGTAATCCAGTCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtt            <  2:579999/93‑1 (MQ=255)
                                                                              gCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGttt           <  1:4773760/93‑1 (MQ=255)
                                                                               ccATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtttt          >  2:5700436/1‑93 (MQ=255)
                                                                               ccATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtttt          >  1:3847640/1‑93 (MQ=255)
                                                                                cATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGttttt         <  2:6662366/93‑1 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       >  2:3452829/1‑93 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       >  2:3763000/1‑93 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       <  1:2045979/93‑1 (MQ=255)
                                                                                   cccAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAg      <  1:291102/93‑1 (MQ=255)
                                                                                    ccAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGt     <  1:2569341/93‑1 (MQ=255)
                                                                                     cAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTg    >  2:4749770/1‑93 (MQ=255)
                                                                                      cgtcatcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   <  1:1920793/92‑1 (MQ=255)
                                                                                      aGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   <  2:5447958/93‑1 (MQ=255)
                                                                                       gtcatcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAt  >  2:7196494/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: