BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	476,985	A→G	V288A (GTG→GCG)	ylaB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	476,985	0	A	G	99.3%	867.6 / ‑3.6	278	V288A (GTG→GCG)	ylaB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (150/126); total (152/126)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.24e-01

Only 100 of 293 total aligned reads displayed.

AACCAACTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCACGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGCC  >  NC_000913/476895‑477074

aaccaacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAAACGGCTGATAGTGcgcg                                                                                         <  2:2424000/93‑1 (MQ=255)

 accaacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTgcgcgc                                                                                        >  2:4401436/1‑93 (MQ=255)

 accaacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTgcgcgc                                                                                        >  1:1988434/1‑93 (MQ=255)

   caacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaa                                                                                      >  2:6426761/1‑93 (MQ=255)

   caacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaa                                                                                      >  2:2814489/1‑93 (MQ=255)

   caacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaa                                                                                      >  1:6692784/1‑93 (MQ=255)

    aacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaaa                                                                                     <  2:2032583/93‑1 (MQ=255)

    aacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaaa                                                                                     <  1:1264174/93‑1 (MQ=255)

    aacTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCaaa                                                                                     <  2:2388154/93‑1 (MQ=255)

     acTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAat                                                                                    >  2:3379278/1‑93 (MQ=255)

     acTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAat                                                                                    <  2:1099734/93‑1 (MQ=255)

     acTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGAGCGCGCAAat                                                                                    >  1:2949220/1‑93 (MQ=255)

        aCCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATc                                                                                 <  1:4640567/93‑1 (MQ=255)

          cGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCAc                                                                               <  1:5131920/93‑1 (MQ=255)

          cGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCAc                                                                               <  1:3554750/93‑1 (MQ=255)

            tctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGa                                                                             >  2:6885235/1‑93 (MQ=255)

            tctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGa                                                                             >  1:454624/1‑93 (MQ=255)

             ctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAt                                                                            <  1:7561355/93‑1 (MQ=255)

             ctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAt                                                                            <  2:4761019/93‑1 (MQ=255)

             ctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAt                                                                            >  2:5577867/1‑93 (MQ=255)

             ctgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAt                                                                            <  1:7473342/93‑1 (MQ=255)

              tgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAtt                                                                           >  1:6246260/1‑93 (MQ=255)

              tgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAtt                                                                           <  1:3777195/93‑1 (MQ=255)

              tgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAtt                                                                           <  1:3496995/93‑1 (MQ=255)

              tgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAtt                                                                           <  2:7559837/93‑1 (MQ=255)

              tgtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAtt                                                                           >  2:2714345/1‑93 (MQ=255)

               gtctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGAttt                                                                          >  2:4231063/1‑93 (MQ=255)

                 ctgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTc                                                                        <  1:2402786/93‑1 (MQ=255)

                  tgCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCg                                                                       >  2:2225654/1‑93 (MQ=255)

                   gCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGa                                                                      <  1:2074841/93‑1 (MQ=255)

                   gCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGa                                                                      <  1:1038476/93‑1 (MQ=255)

                     ggCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATa                                                                    <  2:7058295/93‑1 (MQ=255)

                      gCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAg                                                                   <  1:6041612/93‑1 (MQ=255)

                       ccAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGc                                                                  >  2:4618482/1‑93 (MQ=255)

                        cAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCa                                                                 <  1:1516428/93‑1 (MQ=255)

                          gcgcgcCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATc                                                               >  1:3711119/1‑93 (MQ=255)

                           cgcgcCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGTCAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATcc                                                              >  1:5354938/1‑93 (MQ=255)

                            gcgcCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCt                                                             <  2:5957195/93‑1 (MQ=255)

                              gcCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGc                                                           >  1:6451264/1‑93 (MQ=255)

                              gcCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGc                                                           <  2:1710059/93‑1 (MQ=255)

                               ccAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCa                                                          <  2:6453555/93‑1 (MQ=255)

                               ccAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCa                                                          >  2:4567443/1‑93 (MQ=255)

                                    gCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCga                                                     <  2:3446816/93‑1 (MQ=255)

                                    gCCTCAGCACCGAAAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATAACGATTTTCGATAGCATCCTGCAGCCga                                                     >  2:5159442/1‑93 (MQ=255)

                                     ccTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgat                                                    >  2:7366999/1‑93 (MQ=255)

                                     ccTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgat                                                    <  1:3597441/93‑1 (MQ=255)

                                       tCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgatga                                                  <  1:7254061/93‑1 (MQ=255)

                                       tCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgatga                                                  >  1:1721141/1‑93 (MQ=255)

                                       tCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgatga                                                  <  2:5874606/93‑1 (MQ=255)

                                       tCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgatga                                                  <  2:5423827/93‑1 (MQ=255)

                                        cAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCgatgat                                                 >  2:6778315/1‑93 (MQ=255)

                                          gccccGACAATTATGCCATTGGCTAAGGAGACAATCGGCTGATAGTGAGCGCAAATATCACGATTTTCGATAGCATACTGCAGCCGATGATGc                                               <  2:7021581/90‑1 (MQ=255)

                                          gCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGc                                               >  1:7100137/1‑93 (MQ=255)

                                             ccGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCTGt                                            >  2:315968/1‑93 (MQ=255)

                                             ccGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGt                                            >  2:258990/1‑93 (MQ=255)

                                              cGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTg                                           >  2:2075394/1‑93 (MQ=255)

                                              cGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTg                                           >  1:10930/1‑93 (MQ=255)

                                               gACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGa                                          <  2:7510840/93‑1 (MQ=255)

                                               gACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGa                                          <  1:6786283/93‑1 (MQ=255)

                                                 cAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACt                                        <  1:4427657/93‑1 (MQ=255)

                                                     tttGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAAt                                    <  2:3550448/93‑1 (MQ=255)

                                                      ttGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGGTTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATa                                   >  2:4997821/1‑93 (MQ=255)

                                                        gCCATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACg                                 >  1:4975207/1‑93 (MQ=255)

                                                          cATTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGgc                               <  1:7319886/93‑1 (MQ=255)

                                                           aTTGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGgcg                              >  1:5546098/1‑93 (MQ=255)

                                                            ttGGCTAAGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGCTGATGCGGTGACTGAATACggaga                             >  1:1363273/1‑90 (MQ=255)

                                                                  aaGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATa                       >  2:879240/1‑93 (MQ=255)

                                                                  aaGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATa                       <  2:1150480/93‑1 (MQ=255)

                                                                   aGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATAc                      <  2:7542629/93‑1 (MQ=255)

                                                                   aGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATAc                      <  1:3255068/93‑1 (MQ=255)

                                                                   aGGAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATAc                      <  2:616501/93‑1 (MQ=255)

                                                                    ggAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACg                     >  2:5748193/1‑93 (MQ=255)

                                                                    ggAGACAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACg                     >  2:5308873/1‑93 (MQ=255)

                                                                      agaCAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACgca                   >  2:6637136/1‑93 (MQ=255)

                                                                      agaCAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACgca                   >  2:1780329/1‑93 (MQ=255)

                                                                      agaCAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACgca                   <  1:5969671/93‑1 (MQ=255)

                                                                        aCAATCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACgcagc                 >  2:4204319/1‑93 (MQ=255)

                                                                          aaTCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGcac               >  2:6407541/1‑93 (MQ=255)

                                                                           aTCGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGcaca              >  1:2047161/1‑93 (MQ=255)

                                                                             cGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACaaa            <  2:5231677/93‑1 (MQ=255)

                                                                             cGGCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACaaa            <  2:3614371/93‑1 (MQ=255)

                                                                              ggCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAAc           <  1:977915/93‑1 (MQ=255)

                                                                              ggCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAAc           >  2:6308323/1‑93 (MQ=255)

                                                                              ggCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAAc           <  1:2862193/93‑1 (MQ=255)

                                                                               gCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACa          >  1:7823843/1‑93 (MQ=255)

                                                                               gCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACa          <  1:6704487/93‑1 (MQ=255)

                                                                               gCTGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACa          >  2:6970698/1‑93 (MQ=255)

                                                                                 tGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATc        <  2:131831/93‑1 (MQ=255)

                                                                                 tGATAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATc        <  1:5821503/93‑1 (MQ=255)

                                                                                   aTAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGc      >  1:1448734/1‑93 (MQ=255)

                                                                                   aTAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGc      <  2:7850247/93‑1 (MQ=255)

                                                                                   aTAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGc      >  1:5603316/1‑93 (MQ=255)

                                                                                    tAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCt     >  1:494923/1‑93 (MQ=255)

                                                                                    tAGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCt     >  1:7899527/1‑93 (MQ=255)

                                                                                     aGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTg    >  1:4349808/1‑93 (MQ=255)

                                                                                     aGTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTg    >  1:754738/1‑93 (MQ=255)

                                                                                      gTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGc   <  1:4156079/93‑1 (MQ=255)

                                                                                      gTGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGc   >  2:3918660/1‑93 (MQ=255)

                                                                                       tGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGcc  >  1:4200249/1‑93 (MQ=255)

                                                                                       tGCGCGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGcc  >  2:2359487/1‑93 (MQ=255)

AACCAACTACCGTCTGTCTGCGGCCAGCGCGCCAGTGCCTCAGCACCGACAATTTTGCCATTGGCTAAGGAGACAATCGGCTGATAGTGCACGCAAATATCACGATTTTCGATAGCATCCTGCAGCCGATGATGCGGTGACTGAATACGGCGCAAAATACGCAGCACAAACATCGCTGCC  >  NC_000913/476895‑477074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`