BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,031,772	C→T	C346C (TGC→TGT)	trkH →	TrkH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,031,772	0	C	T	99.7%	1158.8 / ‑6.2	334	C346C (TGC→TGT)	trkH	TrkH
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (134/198); total (135/199)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01

Only 100 of 379 total aligned reads displayed.

GACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGCGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGCATCC  >  NC_000913/4031682‑4031861

gACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTgtgc                                                                                         <  2:4683657/93‑1 (MQ=255)

gACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTgtgc                                                                                         <  1:5718838/93‑1 (MQ=255)

    aCCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCggg                                                                                     <  1:4738737/93‑1 (MQ=255)

       cccgGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCa                                                                                  <  1:4222231/92‑1 (MQ=255)

        ccgGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCaa                                                                                 <  1:2199054/93‑1 (MQ=255)

          gggTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGGTGTGCCGGGGCAACg                                                                               >  2:2114/1‑93 (MQ=255)

           ggTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACgg                                                                              <  1:3679838/93‑1 (MQ=255)

            gTTTACAACTGAGAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACggg                                                                             <  2:3449860/93‑1 (MQ=255)

            gTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACggg                                                                             >  1:4630862/1‑93 (MQ=255)

             tttACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGc                                                                            <  2:6164857/93‑1 (MQ=255)

              ttACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCg                                                                           >  1:1152562/1‑93 (MQ=255)

              ttACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCg                                                                           >  1:7583809/1‑93 (MQ=255)

               tACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCgg                                                                          <  2:4170383/93‑1 (MQ=255)

                tcAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGt                                                                         <  1:4501163/92‑1 (MQ=255)

                aCAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGt                                                                         <  2:3132650/93‑1 (MQ=255)

                 cAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTg                                                                        <  1:6729000/93‑1 (MQ=255)

                   aCTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGc                                                                      <  1:3109151/93‑1 (MQ=255)

                     tGACAGCATTGCCCGCTGGCTGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCt                                                                    <  2:5466488/93‑1 (MQ=255)

                       aCAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGa                                                                  <  2:5998809/93‑1 (MQ=255)

                        cAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGaa                                                                 <  2:3098728/93‑1 (MQ=255)

                         aGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAg                                                                <  1:3257514/93‑1 (MQ=255)

                         aGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGGGGCCTGAAg                                                                >  1:1982919/1‑93 (MQ=255)

                          gCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGGTGTCCCGGGTCCACGGGCGGGGGCCTGAAgg                                                               >  1:2623929/1‑93 (MQ=255)

                           cATTGCCTGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTAGGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGt                                                              <  1:3558820/93‑1 (MQ=255)

                           cATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGCCCTGAAGGt                                                              <  2:5238906/93‑1 (MQ=255)

                             ttGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGa                                                            >  1:5597231/1‑93 (MQ=255)

                             ttGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGGTGTGTCGGGGCAACGGGCGGTGGCCTGAAGGTGa                                                            >  2:751174/1‑93 (MQ=255)

                               gCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATc                                                          <  2:5108879/93‑1 (MQ=255)

                                 ccGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCg                                                        >  1:7760920/1‑93 (MQ=255)

                                  cGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGc                                                       <  2:4468334/93‑1 (MQ=255)

                                  cGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGc                                                       >  1:7908816/1‑93 (MQ=255)

                                   gCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCa                                                      >  1:1037662/1‑93 (MQ=255)

                                        ccGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctg                                                 >  2:2258858/1‑93 (MQ=255)

                                         cGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCTTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgc                                                <  2:6576327/93‑1 (MQ=255)

                                         cGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgc                                                <  1:6350801/93‑1 (MQ=255)

                                         cGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgc                                                >  1:656274/1‑93 (MQ=255)

                                         cGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgc                                                >  1:1579762/1‑93 (MQ=255)

                                         cGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgc                                                >  1:5430339/1‑93 (MQ=255)

                                          gCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgct                                               >  1:7110895/1‑93 (MQ=255)

                                          gCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGGGATCCGCATCctgct                                               >  2:2561689/1‑93 (MQ=255)

                                            tctTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgctgc                                             <  1:5932332/93‑1 (MQ=255)

                                            tctTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgctgc                                             >  1:3977246/1‑93 (MQ=255)

                                             ctTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgctgct                                            >  2:3192245/1‑93 (MQ=255)

                                              tttttGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCctgctgctg                                           >  1:5284013/1‑93 (MQ=255)

                                              tttttGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGGCAACGGGCGGTGGCCTGAAGGGGATCCGCATCctgctgctg                                           >  2:2907312/1‑93 (MQ=255)

                                                 ttGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGttt                                        <  2:1061095/93‑1 (MQ=255)

                                                  tGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTa                                       <  2:6721786/93‑1 (MQ=255)

                                                  tGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTa                                       <  2:5510489/93‑1 (MQ=255)

                                                   gCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTaa                                      <  2:741714/93‑1 (MQ=255)

                                                     cGGTACTGCTTTTATGTTTAGCCTTTATCGGCGGATTTGCCGGGTCAACGGGCGGTTGCCTTAAGGGGATCCGGCTCCTGCTTCTGTTTAAGc                                    >  2:3708925/1‑93 (MQ=255)

                                                       gTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAg                                  >  2:1331151/1‑93 (MQ=255)

                                                       gTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGGGATCCGCATCCTGCTGCTGTTTAAGCAg                                  >  1:4009289/1‑93 (MQ=255)

                                                        tACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAgg                                 >  1:6101462/1‑93 (MQ=255)

                                                        tACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAgg                                 <  2:2936989/93‑1 (MQ=255)

                                                        tACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAgg                                 <  1:7327874/93‑1 (MQ=255)

                                                         aCTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTTGCGGGTCAACGGGCGGGGGCCTGAAGGTGATTCGCATCCTGCTGCTGTTTAAGCAggg                                >  2:7108590/1‑93 (MQ=255)

                                                          cTGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAgggg                               >  1:512338/1‑93 (MQ=255)

                                                           tGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGa                              <  1:2408346/93‑1 (MQ=255)

                                                           tGCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGa                              >  1:1520305/1‑93 (MQ=255)

                                                            gCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTTAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGaa                             <  2:4423478/93‑1 (MQ=255)

                                                            gCTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGaa                             <  1:1287883/93‑1 (MQ=255)

                                                             cTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAAc                            <  2:5360399/93‑1 (MQ=255)

                                                             cTTTTATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAAc                            <  2:791517/93‑1 (MQ=255)

                                                              ttttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAAcc                           <  1:7537120/93‑1 (MQ=255)

                                                              ttttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAAcc                           >  1:1686518/1‑93 (MQ=255)

                                                                ttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGt                         <  2:1248726/93‑1 (MQ=255)

                                                                ttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGt                         <  1:4968091/93‑1 (MQ=255)

                                                                ttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGt                         <  1:3809213/93‑1 (MQ=255)

                                                                ttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGGGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGt                         >  2:7711706/1‑93 (MQ=255)

                                                                ttATGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAAAGGGCGGTGGCCTGAAGGGGCATCGCCTCCTGCTGCTGTTTTAGCAGGGGGAACGt                         >  2:1441348/1‑93 (MQ=255)

                                                                  aTGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTgg                       >  2:5728082/1‑92 (MQ=255)

                                                                  aTGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGa                       <  2:4138837/93‑1 (MQ=255)

                                                                   tGTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTggg                      >  2:5789699/1‑91 (MQ=255)

                                                                    gatCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGc                     <  2:4615770/91‑1 (MQ=255)

                                                                    gTTCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGc                     <  2:3981598/93‑1 (MQ=255)

                                                                     ttCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCt                    <  2:4900897/93‑1 (MQ=255)

                                                                      tCAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGGGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTg                   >  1:2849476/1‑93 (MQ=255)

                                                                       cAGCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGa                  <  1:2546731/93‑1 (MQ=255)

                                                                         gCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGaaa                >  1:6979486/1‑93 (MQ=255)

                                                                         gCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGaaa                <  2:2307467/93‑1 (MQ=255)

                                                                         gCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGaaa                <  1:7644443/93‑1 (MQ=255)

                                                                         gCCTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGaaa                <  2:1865534/93‑1 (MQ=255)

                                                                          ccTTTATCGGCGGTTGTGCCGGGTCAGCGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAAc               <  2:4244157/93‑1 (MQ=255)

                                                                          ccTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAAc               <  2:92385/93‑1 (MQ=255)

                                                                          ccTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAAc               >  2:4786331/1‑93 (MQ=255)

                                                                           cTTTATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACg              <  2:1764019/93‑1 (MQ=255)

                                                                            tttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAGCCGTGAGCTGAAACGa             >  1:7837490/1‑93 (MQ=255)

                                                                            tttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGa             <  1:4804095/93‑1 (MQ=255)

                                                                            tttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGa             <  1:390350/93‑1 (MQ=255)

                                                                            tttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGGGAGCTTAAAAGa             >  2:6053032/1‑93 (MQ=255)

                                                                             ttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGAc            <  2:6805888/93‑1 (MQ=255)

                                                                             ttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGAc            <  2:7605690/93‑1 (MQ=255)

                                                                             ttATCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGAc            <  2:3361269/93‑1 (MQ=255)

                                                                               aTCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTg          <  2:192214/93‑1 (MQ=255)

                                                                                tCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTgg         <  2:2708883/93‑1 (MQ=255)

                                                                                tCGGCGGTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTgg         <  2:6624206/93‑1 (MQ=255)

                                                                                   gcggTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGc      >  1:5335569/1‑93 (MQ=255)

                                                                                   gcggTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGc      >  2:3631866/1‑93 (MQ=255)

                                                                                      gTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGCATc   >  1:3536353/1‑93 (MQ=255)

                                                                                      gTTGTGCCGGGTCAACGGGCGGTGGCCTGAAGGCGATCCGCATCCTGCTGCTGATTTAGCAGGGGAACCGTGAGCTGAAACGACCGGCGCATc   >  2:6997582/1‑93 (MQ=255)

GACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGCGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGCATCC  >  NC_000913/4031682‑4031861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`