BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	477,992	A→G	intergenic (‑145/+13)	ylaB ← / ← ylaC	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	477,992	0	A	G	100.0%	1011.4 / NA	312	intergenic (‑145/+13)	ylaB/ylaC	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (154/158); total (154/158)

Only 100 of 329 total aligned reads displayed.

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

tggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGtgtg                                                                                         >  1:880353/1‑93 (MQ=255)

 ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGgtgtgt                                                                                        >  2:1697594/1‑93 (MQ=255)

  gagaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTa                                                                                       <  1:7628579/93‑1 (MQ=255)

   agaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACTAGGCGCAGAGCTTTACGCCTGGTGTGTaa                                                                                      >  1:6358067/1‑93 (MQ=255)

   agaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTaa                                                                                      <  2:2398896/93‑1 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   >  1:6800509/1‑93 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   >  1:5126279/1‑93 (MQ=255)

        aggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTa                                                                                 <  1:3658347/93‑1 (MQ=255)

         ggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTaa                                                                                >  2:5733854/1‑93 (MQ=255)

         ggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTaa                                                                                >  2:5508755/1‑93 (MQ=255)

          gaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAAc                                                                               <  2:4587550/93‑1 (MQ=255)

           aggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACt                                                                              <  2:2910607/93‑1 (MQ=255)

           aggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACt                                                                              <  2:2181654/93‑1 (MQ=255)

              tAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTaa                                                                           <  2:3542480/93‑1 (MQ=255)

                gagCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGTGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGa                                                                         >  2:7169328/1‑93 (MQ=255)

                gagCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGa                                                                         <  2:136187/93‑1 (MQ=255)

                  gCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATg                                                                       >  2:7667851/1‑93 (MQ=255)

                  gCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATg                                                                       >  1:779654/1‑93 (MQ=255)

                  gCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATg                                                                       >  2:5981253/1‑93 (MQ=255)

                   cTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGt                                                                      <  1:7444252/93‑1 (MQ=255)

                   cTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGt                                                                      >  2:7409031/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     <  2:929424/93‑1 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  1:5164034/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  1:4082721/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTAAGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  1:3516842/1‑93 (MQ=255)

                       tATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTACGATGTTGAt                                                                  >  1:3252714/1‑93 (MQ=255)

                         tttCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTc                                                                <  2:3925550/93‑1 (MQ=255)

                             aTGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcg                                                            >  2:5289507/1‑93 (MQ=255)

                              tGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcgc                                                           >  2:4971470/1‑93 (MQ=255)

                              tGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcgc                                                           <  1:3046674/93‑1 (MQ=255)

                               gAAGTGATGGGTGGAAACGATCATTGTCATTTNACNANGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGcgcg                                                          <  1:7876162/93‑1 (MQ=255)

                                aaGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcga                                                         <  2:1214995/93‑1 (MQ=255)

                                 aGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAGCCCTAACTTAAGATGTTGATTCGGCgcgag                                                        <  1:535172/93‑1 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGCCCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       <  1:6015262/93‑1 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       >  2:7877066/1‑93 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       <  2:5835326/93‑1 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       <  1:152445/93‑1 (MQ=255)

                                   tGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcg                                                      <  2:2456635/93‑1 (MQ=255)

                                    gATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcgg                                                     >  2:6857056/1‑92 (MQ=255)

                                    gATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcga                                                     >  2:2841410/1‑93 (MQ=255)

                                     aTGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGcgagcgag                                                    <  1:6933971/93‑1 (MQ=255)

                                     aTGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGcgagcgag                                                    <  2:7802761/93‑1 (MQ=255)

                                     aTGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGcgagcgag                                                    >  2:2229558/1‑93 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   <  2:6104897/93‑1 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   <  1:625974/93‑1 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   >  1:242369/1‑93 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   <  1:7587085/93‑1 (MQ=255)

                                          tGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaa                                               <  1:4889463/93‑1 (MQ=255)

                                          gggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaa                                               <  1:1830311/92‑1 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              <  2:4787073/93‑1 (MQ=255)

                                            gAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTCAGATGTTGATTCGGCGCGAGCGAGGTTacaa                                             >  1:3955753/1‑93 (MQ=255)

                                            gAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaa                                             <  1:5946300/93‑1 (MQ=255)

                                            gAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaa                                             >  1:6525546/1‑93 (MQ=255)

                                              aaCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAat                                           <  2:3702039/93‑1 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          >  2:432252/1‑93 (MQ=255)

                                                  ttCATTGTCATTTGACTAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCTATCTAGGGTAAAAATATCg                                       >  2:7038755/2‑93 (MQ=255)

                                                   tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGt                                      >  2:7574276/1‑93 (MQ=255)

                                                   tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGt                                      >  1:5965192/1‑93 (MQ=255)

                                                   tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGt                                      <  2:2631444/93‑1 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  1:2680962/1‑93 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    <  1:5822696/93‑1 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  2:3970572/1‑93 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   >  1:6968438/1‑93 (MQ=255)

                                                       tGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaa                                  >  2:3362807/1‑93 (MQ=255)

                                                        gTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaaa                                 <  1:2201384/93‑1 (MQ=255)

                                                        gTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaaa                                 >  2:1673435/1‑93 (MQ=255)

                                                         tCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg                                <  1:573486/93‑1 (MQ=255)

                                                          cATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGa                               <  1:3351043/93‑1 (MQ=255)

                                                           aTTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGAc                              >  1:5051209/1‑93 (MQ=255)

                                                           aTTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGAc                              <  1:2533952/93‑1 (MQ=255)

                                                           aTTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGAc                              >  2:7468144/1‑93 (MQ=255)

                                                            tttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa                             <  2:2547823/93‑1 (MQ=255)

                                                            tttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa                             >  1:452147/1‑93 (MQ=255)

                                                              tGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGt                           <  1:1182831/93‑1 (MQ=255)

                                                               gACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGtt                          <  2:6546698/93‑1 (MQ=255)

                                                                aCCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTc                         >  2:4226699/1‑93 (MQ=255)

                                                                aCCAGGAGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGATCGAGGGTAAAAATATCGTAAAAAGACAGTTc                         <  2:2312523/93‑1 (MQ=255)

                                                                    ggCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCt                     >  1:1586006/1‑93 (MQ=255)

                                                                      cgcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt                   <  2:3840437/93‑1 (MQ=255)

                                                                      cgcAGAGCTTTACGACTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt                   <  2:7714382/93‑1 (MQ=255)

                                                                      ccgcgagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCTCCttt                   <  2:3142925/89‑1 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  >  1:2868427/1‑93 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  >  1:4641336/1‑93 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  1:6701870/93‑1 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  1:4238929/93‑1 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  2:105008/93‑1 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACg                >  1:1311933/1‑93 (MQ=255)

                                                                          gagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACgg               >  1:6423605/1‑93 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  1:2016010/93‑1 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  1:5647768/93‑1 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGAc             >  1:719113/1‑93 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           <  2:6331047/93‑1 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           <  1:3130597/93‑1 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           >  1:3769037/1‑93 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           <  1:7673032/93‑1 (MQ=255)

                                                                               ttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGAt          <  1:805776/93‑1 (MQ=255)

                                                                                 aCGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCa        <  2:4461856/93‑1 (MQ=255)

                                                                                  cGCCTGGTGTGTAACCCTAACTTAAGATGTTGAGTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAt       <  1:2569346/93‑1 (MQ=255)

                                                                                   gCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtt      >  2:5601435/1‑93 (MQ=255)

                                                                                     cTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtttt    >  1:7022290/1‑93 (MQ=255)

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`