BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	482,211	T→C	T473A (ACC→GCC)	acrB ←	acridine efflux pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	482,211	0	T	C	99.7%	926.0 / NA	291	T473A (ACC→GCC)	acrB	acridine efflux pump
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (140/150); total (140/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 296 total aligned reads displayed.

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCaaa                                                                                        >  1:1703670/1‑92 (MQ=255)

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCaaa                                                                                        >  1:555970/1‑92 (MQ=255)

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        <  1:1266181/93‑1 (MQ=255)

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        >  1:7898939/1‑93 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  2:185202/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  1:3265640/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  1:467818/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGAGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     >  2:1915508/1‑93 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  2:3754711/1‑93 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  <  1:7623171/93‑1 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 <  2:4546563/93‑1 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 >  2:693675/1‑93 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 >  1:5151399/1‑93 (MQ=255)

        aTCGGTTTCAGCATCGGGGCACAAAGAGCTGGAGTCAGGAGCAAAGCCACCCCTACCGACAGCGGCATTGCTGTAACAATCGCAATAGAGAAc                                                                                 >  2:7669/1‑93 (MQ=255)

          cGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTg                                                                               <  2:7898741/93‑1 (MQ=255)

           ggTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGa                                                                              <  1:803225/93‑1 (MQ=255)

           ggTTTCAGCATGGTGGCACAAAGAGCTGGAGTAAGGATCAACGCCACCAGTCCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGa                                                                              <  2:4042954/93‑1 (MQ=255)

               tCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgat                                                                          <  2:6745365/93‑1 (MQ=255)

               tCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgat                                                                          <  1:261319/93‑1 (MQ=255)

                 aGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatag                                                                        <  1:6840633/93‑1 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       >  1:6106662/1‑93 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       >  1:2300532/1‑93 (MQ=255)

                     tggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGatagatag                                                                    >  1:1777363/1‑93 (MQ=255)

                          gCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCa                                                               >  1:6472393/1‑93 (MQ=255)

                           cacaAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCTCCAGTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAg                                                              <  1:6973971/93‑1 (MQ=255)

                            acaAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGt                                                             >  1:3594430/1‑93 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            <  1:3302627/93‑1 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            <  2:4864236/93‑1 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            <  2:3550065/93‑1 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            >  1:4433460/1‑93 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            >  1:6981859/1‑93 (MQ=255)

                             caAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTa                                                            <  2:264545/93‑1 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           >  2:7578288/1‑93 (MQ=255)

                                agagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGaa                                                         <  1:3836411/93‑1 (MQ=255)

                                 gagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAAc                                                        <  2:7097611/93‑1 (MQ=255)

                                  agCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAAcc                                                       <  1:3666413/93‑1 (MQ=255)

                                   gCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCg                                                      >  2:2565825/1‑93 (MQ=255)

                                   gCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCg                                                      >  1:5858902/1‑93 (MQ=255)

                                   gCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCg                                                      <  1:311030/93‑1 (MQ=255)

                                      ggAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCa                                                   >  2:3411731/1‑93 (MQ=255)

                                         gTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaag                                                <  1:2464113/93‑1 (MQ=255)

                                         gTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaag                                                >  2:5075779/1‑93 (MQ=255)

                                          tCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAGACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaaga                                               >  2:3608418/1‑93 (MQ=255)

                                          tCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaaga                                               <  2:5445051/93‑1 (MQ=255)

                                            aGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaag                                             <  1:5854394/93‑1 (MQ=255)

                                            aGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaag                                             <  1:2792837/93‑1 (MQ=255)

                                            aGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaag                                             >  2:534330/1‑93 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            >  2:172664/1‑93 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            <  2:7434900/93‑1 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            <  1:1543522/93‑1 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         >  1:4816334/1‑93 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         <  1:1486815/93‑1 (MQ=255)

                                                  aaCGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATc                                       <  1:4334529/93‑1 (MQ=255)

                                                  aaCGCCACAAGTACCGACAGCTCCACTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATc                                       <  1:2252319/93‑1 (MQ=255)

                                                    cGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCgg                                     <  1:4104972/93‑1 (MQ=255)

                                                      ccaccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTa                                   >  1:2990724/1‑93 (MQ=255)

                                                       caccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGCTAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTAc                                  >  1:6058710/1‑93 (MQ=255)

                                                         ccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGa                                >  1:7190374/1‑93 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               <  2:3929533/93‑1 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               <  2:6660536/93‑1 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               <  2:1021270/93‑1 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               >  1:5114527/1‑93 (MQ=255)

                                                            gTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATa                             >  2:6132567/1‑93 (MQ=255)

                                                            gTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATa                             <  2:2809421/93‑1 (MQ=255)

                                                              aCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGCAGGCCATCGGTACGAATAcc                           <  1:38696/93‑1 (MQ=255)

                                                              aCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAcc                           <  1:7519419/93‑1 (MQ=255)

                                                                cGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgc                         >  1:1428895/1‑93 (MQ=255)

                                                                 gACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgcc                        >  2:7726669/1‑93 (MQ=255)

                                                                  aCAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAAGAgcgccg                       >  2:5761468/1‑93 (MQ=255)

                                                                   cAGCGACATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGCCCATCGGTACGAATACCGCCGa                      <  1:200668/93‑1 (MQ=255)

                                                                    aGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGAc                     <  2:1126955/93‑1 (MQ=255)

                                                                     gcgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACa                    >  1:1008949/1‑93 (MQ=255)

                                                                     gcgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACa                    >  2:4479301/1‑93 (MQ=255)

                                                                     gcgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACa                    >  2:899638/1‑93 (MQ=255)

                                                                       gcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGt                  <  1:7429149/93‑1 (MQ=255)

                                                                       gcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGt                  <  2:5941972/93‑1 (MQ=255)

                                                                        ccATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTa                 >  1:5942386/1‑93 (MQ=255)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               >  2:1244597/1‑93 (MQ=255)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               >  2:6241441/1‑93 (MQ=255)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               >  2:4735489/1‑93 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              >  1:3185963/1‑93 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              <  2:4398632/93‑1 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              >  1:1802/1‑93 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              >  2:3247684/1‑93 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              <  2:206995/93‑1 (MQ=255)

                                                                           ttGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCa              >  2:1507546/1‑93 (MQ=255)

                                                                             gCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATc            >  1:2950079/1‑93 (MQ=255)

                                                                             gCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATc            <  2:3345303/93‑1 (MQ=255)

                                                                             gCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATc            >  2:197314/1‑93 (MQ=255)

                                                                               tGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgc          >  1:5032495/1‑93 (MQ=255)

                                                                                 aaaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGa        >  1:1165034/1‑93 (MQ=255)

                                                                                 aaaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGa        <  2:134640/93‑1 (MQ=255)

                                                                                  aaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGAt       >  2:6592072/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATa      >  2:2178436/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATa      >  1:4914554/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATa      >  1:3410936/1‑93 (MQ=255)

                                                                                    cAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAc     <  2:420759/93‑1 (MQ=255)

                                                                                    cAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAc     <  1:7578289/93‑1 (MQ=255)

                                                                                    cAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAc     <  1:6883490/93‑1 (MQ=255)

                                                                                       tGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGa  >  1:5411188/1‑93 (MQ=255)

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`