| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,103,641 | T→C | intergenic (‑390/‑408) | cpxR ← / → yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,103,641 | 0 | T | C | 99.8% | 1231.4 / ‑5.2 | 395 | intergenic (‑390/‑408) | cpxR/yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (199/195); total (200/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.81e-01 | |||||||||||
Only 100 of 403 total aligned reads displayed.
TAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG > NC_000913/4103551‑4103729 | aaCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCa < 2:4123911/93‑1 (MQ=255) aCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAt < 1:6576660/93‑1 (MQ=255) ccGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATc < 1:3579367/93‑1 (MQ=255) ccGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATc > 2:2610100/1‑93 (MQ=255) ccGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATc < 1:7142570/93‑1 (MQ=255) cGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCg > 1:7353289/1‑93 (MQ=255) gAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGc < 1:169921/93‑1 (MQ=255) aCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCt > 1:3043537/1‑93 (MQ=255) aCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCt < 1:4447644/93‑1 (MQ=255) cATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCGCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCtt > 2:429436/1‑93 (MQ=255) cATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCtt < 1:6217074/93‑1 (MQ=255) cATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCtt < 2:5049708/93‑1 (MQ=255) aTCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTg < 1:1827850/93‑1 (MQ=255) tCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGt > 1:2342275/1‑93 (MQ=255) tCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGt > 1:3373078/1‑93 (MQ=255) acAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGt < 1:160473/92‑1 (MQ=255) gCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCAc > 2:1516685/1‑93 (MQ=255) gCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCAc < 1:6301282/93‑1 (MQ=255) cGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCAcc < 1:4675356/93‑1 (MQ=255) tCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGc > 1:3863392/1‑93 (MQ=255) tCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGc > 1:406102/1‑93 (MQ=255) cagcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCa < 1:3269500/93‑1 (MQ=255) cagcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCa < 2:2832151/93‑1 (MQ=255) agcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAg < 1:5556169/93‑1 (MQ=255) agcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAg > 1:1142448/1‑93 (MQ=255) gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGaaaa > 1:7791309/1‑93 (MQ=255) gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGaaaa > 1:6922489/1‑93 (MQ=255) gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGaaaa < 1:2166875/93‑1 (MQ=255) tGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAAtt > 2:3352221/1‑93 (MQ=255) gaTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTtgat < 1:3918386/93‑1 (MQ=255) gaTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTtgat < 1:2411065/93‑1 (MQ=255) aTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTtgatg > 2:6257172/1‑93 (MQ=255) cTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaa > 2:6173187/1‑93 (MQ=255) ttATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaa > 2:1783390/1‑93 (MQ=255) ttATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaa > 2:7885137/1‑93 (MQ=255) ttATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGGTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaa > 2:7134609/1‑93 (MQ=255) ttACGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTGAGCGAACTGGAGACAATGTATCGTCTTGTCACCGCAGAAACTTTTGTTGaaa > 2:490967/1‑93 (MQ=255) tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaaa < 1:258256/93‑1 (MQ=255) tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaaa < 1:2674971/93‑1 (MQ=255) tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGaaaa < 1:477700/93‑1 (MQ=255) tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTGGTCCCCGCAGAAAATTTTGATGaaaa < 1:1041631/93‑1 (MQ=255) aTGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAc > 2:249708/1‑93 (MQ=255) aTGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAc < 2:7532656/93‑1 (MQ=255) gCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGc < 1:3145524/93‑1 (MQ=255) gCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGc < 2:1243088/93‑1 (MQ=255) aaCAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCtg > 2:7574639/1‑93 (MQ=255) aCAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCtgt > 2:6065550/1‑93 (MQ=255) ggCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTgcg > 2:6512579/1‑93 (MQ=255) cccGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTgcgcg < 2:3764079/93‑1 (MQ=255) cGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGca < 2:7211044/93‑1 (MQ=255) gCACGAACAGCCTCCTTTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGcaca < 1:1216021/93‑1 (MQ=255) gCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGcaca > 2:3030402/1‑93 (MQ=255) gCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGcaca < 2:224673/93‑1 (MQ=255) gCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGcaca < 2:5307778/93‑1 (MQ=255) cACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAg < 1:1328461/93‑1 (MQ=255) aCGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAgg < 2:6818727/93‑1 (MQ=255) cGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGc < 1:3670398/93‑1 (MQ=255) cGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGc < 1:761956/93‑1 (MQ=255) gAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCa < 1:1197408/93‑1 (MQ=255) gAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCa < 2:6462374/93‑1 (MQ=255) aCAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGa > 1:814381/1‑93 (MQ=255) cAGCCTCCTGTTAATGTGAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaa < 2:7687088/93‑1 (MQ=255) aGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaa > 1:2031579/1‑93 (MQ=255) gCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaa > 1:2895217/1‑93 (MQ=255) gCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaa < 1:795430/93‑1 (MQ=255) cctcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaaa > 2:3144642/1‑93 (MQ=255) tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt > 1:5349417/1‑93 (MQ=255) tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt > 1:7504225/1‑93 (MQ=255) cctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATg < 2:4461315/93‑1 (MQ=255) ctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATgg < 2:3912587/93‑1 (MQ=255) tGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGc > 2:2141885/1‑93 (MQ=255) tGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGc > 1:6464226/1‑93 (MQ=255) tGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGc > 2:3667466/1‑93 (MQ=255) gTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCg > 2:6661064/1‑93 (MQ=255) gTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCg < 2:1330579/93‑1 (MQ=255) gTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCg > 1:4226950/1‑93 (MQ=255) ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCATAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa > 1:3497280/1‑93 (MQ=255) ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa > 2:3981139/1‑93 (MQ=255) ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa < 2:3254605/93‑1 (MQ=255) ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa > 2:5787869/1‑93 (MQ=255) tAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGaa < 1:5758652/93‑1 (MQ=255) tAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGaa < 2:3562802/93‑1 (MQ=255) aaTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAt > 1:5647760/1‑93 (MQ=255) aaTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAt < 1:4906244/93‑1 (MQ=255) aTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATg < 1:5960743/93‑1 (MQ=255) tGTTAGCGAACTGGAGACAACGCATCGTCTTGTCACCGTAGAATATTATGATGAAAACGCTGTGTGCGCACAGGCAGTAAAAATGGCGAAAGa > 1:7046058/1‑93 (MQ=255) gTTAGCGGACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAg < 2:6716707/93‑1 (MQ=255) gTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAg < 1:5203987/93‑1 (MQ=255) gTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAg > 2:7335027/1‑93 (MQ=255) gTTAGCGAACTGGAGACAACGCATCGCCTTGTCAACGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAg > 2:4611466/1‑93 (MQ=255) ttAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGc > 2:5555208/1‑93 (MQ=255) gCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCaaa > 1:5261820/1‑93 (MQ=255) gCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCaaa > 1:7729595/1‑93 (MQ=255) gAACTTGATACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAAtt > 2:7039720/1‑93 (MQ=255) gAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAAtt < 1:1458732/93‑1 (MQ=255) aCTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGc < 2:1931454/93‑1 (MQ=255) tGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTc > 2:2362730/1‑93 (MQ=255) ggAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCg > 2:5541813/1‑93 (MQ=255) gagaCAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGt > 2:1051906/1‑93 (MQ=255) agaCAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTc < 2:6340593/93‑1 (MQ=255) | TAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG > NC_000913/4103551‑4103729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |