BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,178,668	A→G	intergenic (+165/‑155)	rplL → / → rpoB	50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,178,668	0	A	G	100.0%	1218.3 / NA	386	intergenic (+165/‑155)	rplL/rpoB	50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (196/190); total (196/190)

Only 100 of 391 total aligned reads displayed.

TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757

tGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCg                                                                                         >  2:1589413/1‑93 (MQ=255)

 gTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGt                                                                                        <  2:1500457/93‑1 (MQ=255)

 gTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGt                                                                                        >  2:2763764/1‑93 (MQ=255)

  tAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTc                                                                                       <  1:1167051/93‑1 (MQ=255)

  tAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTc                                                                                       >  2:5487773/1‑93 (MQ=255)

       cgcCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTc                                                                                  <  2:1844930/93‑1 (MQ=255)

         ccAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCtg                                                                                <  2:1344860/93‑1 (MQ=255)

          cAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCtgt                                                                               <  2:2005159/93‑1 (MQ=255)

            gTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTgtgt                                                                             <  2:5305150/93‑1 (MQ=255)

             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            <  2:3864232/93‑1 (MQ=255)

             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            >  2:3510534/1‑93 (MQ=255)

             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            <  2:2143638/93‑1 (MQ=255)

                cGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAt                                                                         <  2:6758891/93‑1 (MQ=255)

                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  2:6012936/93‑1 (MQ=255)

                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  2:4277598/93‑1 (MQ=255)

                  tttCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCg                                                                       >  1:4082070/1‑93 (MQ=255)

                    tCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCa                                                                     >  2:6476659/1‑93 (MQ=255)

                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    <  1:3150591/93‑1 (MQ=255)

                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    <  1:2545557/93‑1 (MQ=255)

                      acacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAt                                                                   <  2:2553207/93‑1 (MQ=255)

                      acacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAt                                                                   >  2:1032164/1‑93 (MQ=255)

                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 >  1:1959644/1‑93 (MQ=255)

                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 <  1:3920965/93‑1 (MQ=255)

                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 <  2:1189962/93‑1 (MQ=255)

                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  2:7518250/1‑93 (MQ=255)

                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  2:3089980/1‑93 (MQ=255)

                          tgtgtgACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               <  2:5397583/93‑1 (MQ=255)

                          tGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               <  1:2451546/93‑1 (MQ=255)

                           gTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAt                                                              <  1:3608089/93‑1 (MQ=255)

                              tGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGt                                                           <  1:5092374/93‑1 (MQ=255)

                              tGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGt                                                           <  2:3637683/93‑1 (MQ=255)

                               gACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGTCTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGtt                                                          <  1:1025047/93‑1 (MQ=255)

                               gACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGtt                                                          <  2:78654/93‑1 (MQ=255)

                                actactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGttt                                                         >  2:6192921/1‑93 (MQ=255)

                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        >  1:4403718/1‑93 (MQ=255)

                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        <  1:3447058/93‑1 (MQ=255)

                                  tactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTaa                                                       <  2:2291773/93‑1 (MQ=255)

                                   actGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAg                                                      <  1:6335874/93‑1 (MQ=255)

                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  1:7776234/1‑93 (MQ=255)

                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  1:2838055/1‑93 (MQ=255)

                                      gctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGt                                                   >  2:4546965/1‑93 (MQ=255)

                                       ctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTg                                                  <  2:1411839/93‑1 (MQ=255)

                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 >  2:4399104/1‑93 (MQ=255)

                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 >  1:6287334/1‑93 (MQ=255)

                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 <  1:5271172/93‑1 (MQ=255)

                                         gtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAt                                                >  2:5580867/1‑93 (MQ=255)

                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               >  1:6199513/1‑93 (MQ=255)

                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:7564084/93‑1 (MQ=255)

                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:4609386/93‑1 (MQ=255)

                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:2210862/93‑1 (MQ=255)

                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:5538579/93‑1 (MQ=255)

                                             cTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGCAATGGTTTAAGCGTGATAGCa                                            >  1:3692894/1‑93 (MQ=255)

                                             cTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCa                                            <  1:4774651/93‑1 (MQ=255)

                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  2:578515/1‑93 (MQ=255)

                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:2492414/1‑93 (MQ=255)

                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:5664782/1‑93 (MQ=255)

                                               ttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAc                                          >  1:7348388/1‑93 (MQ=255)

                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         <  1:1436418/93‑1 (MQ=255)

                                                  aaTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAgg                                       >  2:3236227/1‑93 (MQ=255)

                                                   aTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGc                                      >  1:7447535/1‑93 (MQ=255)

                                                   aTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGc                                      <  1:5867745/93‑1 (MQ=255)

                                                    tGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCa                                     <  2:7775104/93‑1 (MQ=255)

                                                      cTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAtt                                   >  1:659535/1‑93 (MQ=255)

                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:2311582/1‑93 (MQ=255)

                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:4955597/1‑93 (MQ=255)

                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:3307240/1‑93 (MQ=255)

                                                        tGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGc                                 <  2:4061015/93‑1 (MQ=255)

                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  2:1913618/1‑93 (MQ=255)

                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  2:5139590/1‑93 (MQ=255)

                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  1:875260/1‑93 (MQ=255)

                                                           ttCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGa                              <  1:3834990/93‑1 (MQ=255)

                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            <  1:7478648/93‑1 (MQ=255)

                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            >  1:6467561/1‑93 (MQ=255)

                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            >  1:2389681/1‑93 (MQ=255)

                                                              tATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAg                           >  1:2354969/1‑93 (MQ=255)

                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          >  2:1684042/1‑93 (MQ=255)

                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          <  1:6814861/93‑1 (MQ=255)

                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          >  2:4894886/1‑93 (MQ=255)

                                                                  gacgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGtt                       <  2:4756055/93‑1 (MQ=255)

                                                                   acgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTCAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTc                      <  2:7032957/93‑1 (MQ=255)

                                                                   acgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTc                      <  1:6996122/93‑1 (MQ=255)

                                                                    cgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTcc                     <  1:4886997/93‑1 (MQ=255)

                                                                     gacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCa                    >  1:966911/1‑93 (MQ=255)

                                                                     gacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCa                    <  1:4018671/93‑1 (MQ=255)

                                                                      acTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAt                   <  1:1545011/93‑1 (MQ=255)

                                                                        ttAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAttt                 <  2:6829384/93‑1 (MQ=255)

                                                                         tAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtttt                >  2:2400540/1‑93 (MQ=255)

                                                                         tAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtttt                >  1:162821/1‑93 (MQ=255)

                                                                           atatACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTcg              >  1:5346350/1‑92 (MQ=255)

                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             >  2:2598904/1‑93 (MQ=255)

                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             <  2:7293740/93‑1 (MQ=255)

                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             >  2:63454/1‑93 (MQ=255)

                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           <  2:4629455/93‑1 (MQ=255)

                                                                                cTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTca         >  1:7679380/1‑93 (MQ=255)

                                                                                  gCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGTGGAAAGTGTTCCATTTTCCGGTcaac       <  2:822227/93‑1 (MQ=255)

                                                                                    gACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTcaacaa     >  2:7577758/1‑93 (MQ=255)

                                                                                     aCAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACaaa    >  1:3007037/1‑93 (MQ=255)

                                                                                      cAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACaaaa   <  1:5728337/93‑1 (MQ=255)

                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  <  2:6112194/93‑1 (MQ=255)

                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  <  2:2095846/93‑1 (MQ=255)

TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`