BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,297,280	T→C	T444A (ACC→GCC)	yjcP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,297,280	0	T	C	100.0%	1079.7 / NA	341	T444A (ACC→GCC)	yjcP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (194/147); total (194/147)

Only 100 of 366 total aligned reads displayed.

ATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCA  >  NC_000913/4297190‑4297369

aTTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTcggcgg                                                                                         >  2:6409173/1‑93 (MQ=255)

 tttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc                                                                                        >  1:4526013/1‑93 (MQ=255)

 tttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc                                                                                        >  2:5125979/1‑93 (MQ=255)

  ttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGcc                                                                                       >  1:6906930/1‑93 (MQ=255)

  ttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGcc                                                                                       <  1:924835/93‑1 (MQ=255)

      tcaACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCCACCGGGCTTCGGCGGCCTGTa                                                                                   >  1:6224987/1‑93 (MQ=255)

      tcaACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTa                                                                                   >  2:3789177/1‑93 (MQ=255)

      tcaACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTa                                                                                   >  1:3178252/1‑93 (MQ=255)

         aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc                                                                                >  1:7428716/1‑93 (MQ=255)

         aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc                                                                                >  1:6319591/1‑93 (MQ=255)

         aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc                                                                                >  1:4182896/1‑93 (MQ=255)

            gAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGc                                                                             <  1:780203/93‑1 (MQ=255)

            gAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGc                                                                             >  2:7685786/1‑93 (MQ=255)

            gAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGAGGc                                                                             >  2:205492/1‑93 (MQ=255)

             aaTGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCt                                                                            >  2:4174994/1‑93 (MQ=255)

                gCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGt                                                                         <  1:399764/93‑1 (MQ=255)

                 cTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGtt                                                                        <  1:2672212/93‑1 (MQ=255)

                    tGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAg                                                                     <  2:5412660/93‑1 (MQ=255)

                    tGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAg                                                                     <  2:1323806/93‑1 (MQ=255)

                      gATCACCCGGCGGCGGTCCAGCATCAGTAATGACAGCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGcc                                                                   <  2:5614401/93‑1 (MQ=255)

                       aTCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCcg                                                                  >  2:6211700/1‑93 (MQ=255)

                       aTCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCcg                                                                  >  1:5885017/1‑93 (MQ=255)

                        tCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCcgc                                                                 <  1:2279891/93‑1 (MQ=255)

                           cccGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCt                                                              <  1:4393139/93‑1 (MQ=255)

                           cccGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCt                                                              >  2:6551262/1‑93 (MQ=255)

                             cggcggCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGa                                                            <  1:7602436/93‑1 (MQ=255)

                              ggcggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCAGCGCTGAt                                                           <  1:1540991/93‑1 (MQ=255)

                               gcggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATa                                                          <  1:5381098/93‑1 (MQ=255)

                                cggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAg                                                         <  1:2773403/93‑1 (MQ=255)

                                 ggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGNCTGTAAGCGGCTGGTTANGCCGCGCTGATAgg                                                        >  2:3646244/1‑93 (MQ=255)

                                  gcTATCCAGCATCAGTAATGACATCTCTTCGACAAGCACTGGCACCCGGGCTTCGGCGGCCTGCAATCGGCTGGTTAAGCCGCGCTGATAggc                                                       <  2:1856091/93‑1 (MQ=255)

                                    tGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcgg                                                     >  1:458417/1‑93 (MQ=255)

                                    tGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcgg                                                     >  2:6923730/1‑93 (MQ=255)

                                     gTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcggc                                                    <  2:4355360/93‑1 (MQ=255)

                                      tCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGcc                                                   <  1:2932840/93‑1 (MQ=255)

                                       ccAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGGTGATAGGCGGCCt                                                  >  2:4472608/1‑93 (MQ=255)

                                       ccAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCt                                                  >  2:293410/1‑93 (MQ=255)

                                       ccAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCt                                                  <  2:7242639/93‑1 (MQ=255)

                                       ccAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCt                                                  >  2:3462632/1‑93 (MQ=255)

                                        cAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTc                                                 <  1:5120125/93‑1 (MQ=255)

                                        cAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTc                                                 >  2:2998114/1‑93 (MQ=255)

                                         aGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCg                                                >  2:1101925/1‑93 (MQ=255)

                                          gCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCgg                                               >  1:1026847/1‑93 (MQ=255)

                                           cATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGc                                              >  2:3973731/1‑93 (MQ=255)

                                            aTCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCa                                             >  2:5971321/1‑93 (MQ=255)

                                            aTCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCa                                             >  1:81263/1‑93 (MQ=255)

                                              cAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgc                                           >  2:2200921/1‑93 (MQ=255)

                                                gTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgc                                         <  2:6015218/93‑1 (MQ=255)

                                                 tAATGTCATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcg                                        >  1:4857756/1‑93 (MQ=255)

                                                 tAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcg                                        >  2:2405968/1‑93 (MQ=255)

                                                  aaTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcgc                                       <  1:2409837/93‑1 (MQ=255)

                                                    tGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTg                                     <  1:5542400/93‑1 (MQ=255)

                                                     gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg                                    >  1:5034365/1‑93 (MQ=255)

                                                     gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg                                    >  1:2906468/1‑93 (MQ=255)

                                                     gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg                                    >  1:6457758/1‑93 (MQ=255)

                                                     gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg                                    <  1:6731512/93‑1 (MQ=255)

                                                     gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGGTAAGCCGCGCTGATAAGCGGCCTCGGCAGCGCGCTgg                                    >  1:7141924/1‑93 (MQ=255)

                                                      aCATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTggg                                   >  2:3924958/1‑93 (MQ=255)

                                                      aCATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTggg                                   >  1:7152198/1‑93 (MQ=255)

                                                       cctctcTTCGGCAAGCAATGGCAACCGGGCTTCGGCCGCCTGTAAGGGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGt                                  <  1:6191961/91‑1 (MQ=255)

                                                       cATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGt                                  >  2:4882644/1‑93 (MQ=255)

                                                       cATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGt                                  >  1:523087/1‑93 (MQ=255)

                                                       cATCTCTGCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGt                                  <  2:3214623/93‑1 (MQ=255)

                                                         tctcTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTACGCGGCTGGTTAAGCCGCGCTGGTAGTCGGCCTCCGCACGGCCCTGGGGaa                                >  1:97114/1‑93 (MQ=255)

                                                         tctcTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTaa                                >  2:7360615/1‑93 (MQ=255)

                                                         tctcTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTaa                                >  1:3565152/1‑93 (MQ=255)

                                                          ctctTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTaaa                               <  2:4663343/93‑1 (MQ=255)

                                                           tctTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAg                              <  1:5780708/93‑1 (MQ=255)

                                                            ctTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAgc                             >  2:4251157/1‑93 (MQ=255)

                                                             ttCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGAGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGGAGAgcg                            >  1:1799476/1‑93 (MQ=255)

                                                              tCGGCAAGCACTGGCAACCGGCCTTCGGCGGCCTGTAAGCGGCTGGCTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAgcgc                           <  1:3238004/93‑1 (MQ=255)

                                                                 gCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTg                        <  2:4505873/93‑1 (MQ=255)

                                                                   aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCCGCGCGCTGGGTAAAGCGCGTCGc                      >  2:2852904/1‑93 (MQ=255)

                                                                   aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGc                      >  1:1434007/1‑93 (MQ=255)

                                                                   aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGc                      >  1:7326903/1‑93 (MQ=255)

                                                                   aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGc                      >  2:7811862/1‑93 (MQ=255)

                                                                    aGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCt                     >  2:577169/1‑93 (MQ=255)

                                                                      cACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTc                   <  2:1591794/93‑1 (MQ=255)

                                                                       aCTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTcc                  <  2:6758534/93‑1 (MQ=255)

                                                                       aCTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTcc                  <  2:2091622/93‑1 (MQ=255)

                                                                       aCTGGCAACCGGGCTTCGGCGGCATGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTcc                  <  2:5667456/93‑1 (MQ=255)

                                                                        cTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTccc                 >  2:6465251/1‑92 (MQ=255)

                                                                        cTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCa                 <  1:6597558/93‑1 (MQ=255)

                                                                        cTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCa                 <  1:3804360/93‑1 (MQ=255)

                                                                        cTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCa                 <  1:7822875/93‑1 (MQ=255)

                                                                           gCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCAcgc              <  2:3395761/93‑1 (MQ=255)

                                                                           gCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCAcgc              >  1:7711782/1‑93 (MQ=255)

                                                                           gCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCAcgc              <  2:2141089/93‑1 (MQ=255)

                                                                             aaCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGt            >  1:1991226/1‑93 (MQ=255)

                                                                              aCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGtt           >  2:930618/1‑93 (MQ=255)

                                                                               ccGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTc          <  2:2645518/93‑1 (MQ=255)

                                                                               ccGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTc          <  2:2553079/93‑1 (MQ=255)

                                                                                cGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCa         <  1:1287591/93‑1 (MQ=255)

                                                                                  ggCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGc       >  2:6682335/1‑93 (MQ=255)

                                                                                  ggCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGc       >  1:6114/1‑93 (MQ=255)

                                                                                  ggCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGc       <  1:4647433/93‑1 (MQ=255)

                                                                                   gCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGcc      >  1:4349381/1‑93 (MQ=255)

                                                                                   gCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGcc      >  1:3025968/1‑93 (MQ=255)

                                                                                   gCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGcc      <  1:2514193/93‑1 (MQ=255)

                                                                                      tCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGc   >  2:7600986/1‑93 (MQ=255)

ATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCA  >  NC_000913/4297190‑4297369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`