Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 531,453 T→C intergenic (‑8/‑222) ybbS ← / → ybbT putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913531,4530TC99.4% 972.9 / ‑5.0 310intergenic (‑8/‑222)ybbS/ybbTputative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (147/161);  total (149/161)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 316 total aligned reads displayed.

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542
                                                                                          |                                                                                         
ttACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCAt                                                                                         <  1:2505800/93‑1 (MQ=255)
  aCATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcc                                                                                       >  1:1161929/1‑93 (MQ=255)
    aTAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCAGCAAGGTTTCTGGATCGAACATCTTCAGGCATcccc                                                                                     >  1:6130587/1‑93 (MQ=255)
     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    >  1:1275392/1‑93 (MQ=255)
       aTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCttt                                                                                  >  2:1620176/1‑93 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 >  2:1904314/1‑93 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 <  2:501278/93‑1 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 >  1:4311065/1‑93 (MQ=255)
          gTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaa                                                                               <  2:5220726/93‑1 (MQ=255)
          gTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGAATCGAACATCTTCAGGCATCCCCTTTTaa                                                                               >  2:3883450/1‑93 (MQ=255)
           ttCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              <  1:6506877/93‑1 (MQ=255)
           ttCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              >  1:1790257/1‑93 (MQ=255)
           ttCTGCCGCTTATGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              <  2:7433156/93‑1 (MQ=255)
                ccGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGc                                                                         >  2:5921297/1‑93 (MQ=255)
                ccGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGc                                                                         <  1:3131114/93‑1 (MQ=255)
                 cGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCTCTTTTAAATCCGCa                                                                        >  1:7588027/1‑93 (MQ=255)
                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       <  2:5740545/93‑1 (MQ=255)
                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       <  1:850334/93‑1 (MQ=255)
                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       >  2:2156051/1‑93 (MQ=255)
                   cTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAg                                                                      >  1:4731479/1‑93 (MQ=255)
                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                     <  2:4824901/93‑1 (MQ=255)
                     tttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGtt                                                                    <  1:1447305/93‑1 (MQ=255)
                      ttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTg                                                                   >  1:3439928/1‑93 (MQ=255)
                       tGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGc                                                                  >  2:4860293/1‑93 (MQ=255)
                       tGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGc                                                                  <  2:1104601/93‑1 (MQ=255)
                            aaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAt                                                             >  2:1384800/1‑93 (MQ=255)
                            aaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAt                                                             <  1:6879850/93‑1 (MQ=255)
                                tCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTc                                                         <  2:4153071/93‑1 (MQ=255)
                                 ccTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCt                                                        <  2:6643619/93‑1 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  2:3632203/93‑1 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      >  2:899401/1‑93 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      >  1:1832374/1‑93 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  1:2142259/93‑1 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      >  2:656754/1‑93 (MQ=255)
                                     tttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATc                                                    <  1:5409681/93‑1 (MQ=255)
                                     tttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATc                                                    <  1:6027379/93‑1 (MQ=255)
                                      ttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATcc                                                   >  2:2009697/1‑93 (MQ=255)
                                      ttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATcc                                                   >  1:571593/1‑93 (MQ=255)
                                       tCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCct                                                  >  1:1028851/1‑93 (MQ=255)
                                        cAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctc                                                 <  1:292408/93‑1 (MQ=255)
                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                <  2:105606/93‑1 (MQ=255)
                                         aGCAACCGCAATGAAAGTCCGCAAGGGTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                <  1:4380417/93‑1 (MQ=255)
                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               >  1:6299492/1‑93 (MQ=255)
                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               <  1:4769491/93‑1 (MQ=255)
                                           cAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGa                                              <  2:260640/93‑1 (MQ=255)
                                           cAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGa                                              <  2:6601714/93‑1 (MQ=255)
                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                             >  1:2331332/1‑93 (MQ=255)
                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        >  1:925195/1‑93 (MQ=255)
                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        >  1:4142854/1‑93 (MQ=255)
                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCATATCCTCTGATTTATc                                        <  1:2826388/93‑1 (MQ=255)
                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                      <  2:4558874/93‑1 (MQ=255)
                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                      >  1:6656344/1‑93 (MQ=255)
                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                      >  1:3839667/1‑93 (MQ=255)
                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                      <  1:2045202/93‑1 (MQ=255)
                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                      >  1:5203417/1‑93 (MQ=255)
                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     <  1:366391/93‑1 (MQ=255)
                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     >  1:967484/1‑93 (MQ=255)
                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     <  1:139400/93‑1 (MQ=255)
                                                      aaaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAt                                   <  1:2598137/93‑1 (MQ=255)
                                                       aaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtt                                  <  2:3524024/93‑1 (MQ=255)
                                                       aaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtt                                  <  2:5366911/93‑1 (MQ=255)
                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                 <  1:5069718/93‑1 (MQ=255)
                                                           ccGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTa                              <  1:7911583/93‑1 (MQ=255)
                                                            cGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTAc                             >  2:2865914/1‑93 (MQ=255)
                                                              cAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACAt                           <  2:7299989/93‑1 (MQ=255)
                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                         <  2:808956/93‑1 (MQ=255)
                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                         <  1:3020883/93‑1 (MQ=255)
                                                                 ggTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGAt                        <  1:766782/93‑1 (MQ=255)
                                                                  gTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATa                       <  2:2294817/93‑1 (MQ=255)
                                                                   tttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATaa                      <  2:4343063/93‑1 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     <  1:1097402/93‑1 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     <  2:6996729/93‑1 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     <  1:2405082/93‑1 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     <  2:582593/93‑1 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     >  1:7289896/1‑93 (MQ=255)
                                                                     tCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAcc                    <  1:5288358/93‑1 (MQ=255)
                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  <  2:4722194/93‑1 (MQ=255)
                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  <  1:1923184/93‑1 (MQ=255)
                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  >  1:3740386/1‑93 (MQ=255)
                                                                       tGGATCGAACATCTCCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  <  2:1161929/93‑1 (MQ=255)
                                                                         gATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGt                <  2:5627678/93‑1 (MQ=255)
                                                                          aTCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGtt               <  1:6682777/93‑1 (MQ=255)
                                                                           tCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTc              >  2:737651/1‑93 (MQ=255)
                                                                             gAACATCTTCAGGCATCCCCTTTTAAATTCGCAAGGTGCGTGACTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCat            >  2:3431723/1‑92 (MQ=255)
                                                                             gAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCaa            >  1:7863510/1‑93 (MQ=255)
                                                                              aaCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAt           <  1:3330554/93‑1 (MQ=255)
                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt          >  2:5525622/1‑93 (MQ=255)
                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt          >  1:4268327/1‑93 (MQ=255)
                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt          <  2:298091/93‑1 (MQ=255)
                                                                                cATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAttt         <  1:562726/93‑1 (MQ=255)
                                                                                cATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAttt         <  2:149107/93‑1 (MQ=255)
                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       <  2:4349946/93‑1 (MQ=255)
                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       >  2:6307484/1‑93 (MQ=255)
                                                                                   cTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgtg      <  2:7579910/93‑1 (MQ=255)
                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     >  2:6853557/1‑93 (MQ=255)
                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     <  2:4945198/93‑1 (MQ=255)
                                                                                     tCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGa    >  1:4856980/1‑93 (MQ=255)
                                                                                      cAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGAc   <  1:7456194/93‑1 (MQ=255)
                                                                                       aGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACt  <  1:1126889/93‑1 (MQ=255)
                                                                                       aGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACt  >  2:1685413/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: