Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,531,428 C→T intergenic (‑76/‑1155) yjhQ ← / → yjhR hypothetical protein/putative frameshift suppressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,531,4280CT99.8% 1460.7 / ‑6.7 415intergenic (‑76/‑1155)yjhQ/yjhRhypothetical protein/putative frameshift suppressor
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (208/205);  total (210/205)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 425 total aligned reads displayed.

GTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAG  >  NC_000913/4531338‑4531517
                                                                                          |                                                                                         
gtggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCa                                                                                         <  1:1977123/93‑1 (MQ=255)
 tggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAt                                                                                        <  2:70207/93‑1 (MQ=255)
 gggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAt                                                                                        <  1:3831950/92‑1 (MQ=255)
  ggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAtt                                                                                       <  1:5815668/93‑1 (MQ=255)
  ggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAtt                                                                                       >  2:2203452/1‑93 (MQ=255)
   gtgtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTg                                                                                      >  1:1498190/1‑93 (MQ=255)
   gtgtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTg                                                                                      >  2:2801905/1‑93 (MQ=255)
    tgtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGa                                                                                     <  2:2513244/93‑1 (MQ=255)
    tgtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGa                                                                                     <  2:5889582/93‑1 (MQ=255)
    ggtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGa                                                                                     <  2:5979140/92‑1 (MQ=255)
      tACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACg                                                                                   >  1:4339304/1‑93 (MQ=255)
       aCTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACgg                                                                                  >  2:1234537/1‑93 (MQ=255)
        cTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGa                                                                                 >  2:3248856/1‑93 (MQ=255)
        cTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGa                                                                                 >  2:1806833/1‑93 (MQ=255)
        cTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGa                                                                                 >  2:4609827/1‑93 (MQ=255)
        cTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGa                                                                                 <  1:7596731/93‑1 (MQ=255)
         tGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGAc                                                                                >  1:5133880/1‑93 (MQ=255)
         tGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGAc                                                                                <  2:487853/93‑1 (MQ=255)
          gTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACt                                                                               <  2:3077512/93‑1 (MQ=255)
           tCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACtt                                                                              >  2:6878414/1‑93 (MQ=255)
           tCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACtt                                                                              >  2:6110246/1‑93 (MQ=255)
            cATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTg                                                                             <  2:4153766/93‑1 (MQ=255)
            cATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGGGGGGTTGATTGGATAGGGGTGGTCCGTGACGGGCTTg                                                                             >  1:6335508/1‑93 (MQ=255)
              tAGAAACTCTCCTTAGCGATTATCGCGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGAt                                                                           >  1:4126168/1‑93 (MQ=255)
              tAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGAt                                                                           <  1:561654/93‑1 (MQ=255)
               aGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATa                                                                          <  2:2591962/93‑1 (MQ=255)
               aGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATa                                                                          >  1:4823858/1‑93 (MQ=255)
                gAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATaa                                                                         >  1:2947298/1‑93 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                       <  1:2202910/93‑1 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                       <  2:1857034/93‑1 (MQ=255)
                   aCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtt                                                                      >  1:6414633/1‑93 (MQ=255)
                    ctctCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGttt                                                                     >  2:7497609/1‑93 (MQ=255)
                     tctcCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtttt                                                                    >  2:794449/1‑93 (MQ=255)
                         cTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTgg                                                                >  1:6605265/1‑93 (MQ=255)
                         cTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTgg                                                                >  2:2959534/1‑93 (MQ=255)
                          ttAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGt                                                               >  1:6290165/1‑93 (MQ=255)
                          ttAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGt                                                               >  1:3992406/1‑93 (MQ=255)
                          ttAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGt                                                               >  1:7294060/1‑93 (MQ=255)
                             gCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtttt                                                            <  1:5246380/93‑1 (MQ=255)
                             gCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtttt                                                            <  2:5931226/93‑1 (MQ=255)
                             gCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtttt                                                            <  2:7372307/93‑1 (MQ=255)
                               gATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTTACGGGCTTGATAAGTTTTTTGGTTTTGa                                                          >  2:1452596/1‑93 (MQ=255)
                               gATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGa                                                          >  1:5416801/1‑93 (MQ=255)
                               gATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGa                                                          <  1:5031445/93‑1 (MQ=255)
                                 ttATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGt                                                        <  2:5233819/93‑1 (MQ=255)
                                  tATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtt                                                       <  2:1704677/93‑1 (MQ=255)
                                   aTCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTTATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttt                                                      >  1:2676228/1‑93 (MQ=255)
                                   aTCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttt                                                      >  1:3697052/1‑93 (MQ=255)
                                    tCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGa                                                          <  1:3579684/88‑1 (MQ=255)
                                     cGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttttt                                                    <  2:4823857/93‑1 (MQ=255)
                                     cGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttttt                                                    <  2:1327024/93‑1 (MQ=255)
                                      gAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttttt                                                   <  2:7819279/93‑1 (MQ=255)
                                      gAGCTGAGCGCGAACTTTATTCAGCTCGGCGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAATTTTTTGGTTTTGAGtttttt                                                   >  2:3686960/1‑93 (MQ=255)
                                        gCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGa                                                 >  2:5427873/1‑93 (MQ=255)
                                          tGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAg                                               <  1:1735506/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                             <  1:1183161/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                             <  2:6248906/93‑1 (MQ=255)
                                             gcgcGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGCAGatg                                            >  1:2839265/1‑91 (MQ=255)
                                              cgcgAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACgg                                           >  2:6766800/1‑93 (MQ=255)
                                              cgcgAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACgg                                           <  1:7914296/93‑1 (MQ=255)
                                                 gAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGa                                        <  2:290177/93‑1 (MQ=255)
                                                 gAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGa                                        <  2:7605170/93‑1 (MQ=255)
                                                  aaCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAg                                       <  2:5599418/93‑1 (MQ=255)
                                                   aCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGc                                      >  1:3192957/1‑93 (MQ=255)
                                                   aCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGc                                      <  2:7726052/93‑1 (MQ=255)
                                                     tttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGt                                    <  2:7650605/93‑1 (MQ=255)
                                                     tttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGt                                    <  1:981699/93‑1 (MQ=255)
                                                      ttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTg                                   >  1:5274069/1‑93 (MQ=255)
                                                        aTTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCa                                 <  2:2663697/93‑1 (MQ=255)
                                                            aGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCg                             <  2:1965904/93‑1 (MQ=255)
                                                            aGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCg                             >  2:6563875/1‑93 (MQ=255)
                                                             gCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCgg                            >  2:2150512/1‑93 (MQ=255)
                                                              cTCGGTGGTTGTGATTCGATAGGGCTGGTCATTGACGGACTAGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGt                           <  2:6437803/93‑1 (MQ=255)
                                                              cTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGt                           >  1:2627023/1‑93 (MQ=255)
                                                              cTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTGTTTTGAAGACGGCGAGCGTGCAGTCGGt                           >  1:1850396/1‑93 (MQ=255)
                                                               tCGGTGGTGTTGATTTGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTc                          <  1:6730167/93‑1 (MQ=255)
                                                                cGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCa                         <  2:7179170/93‑1 (MQ=255)
                                                                  gtggtgTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGc                       >  1:2400869/1‑93 (MQ=255)
                                                                    ggtgTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCaa                     <  1:837349/93‑1 (MQ=255)
                                                                     gtgtTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAAc                    >  2:5149466/1‑93 (MQ=255)
                                                                     gtgtTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAAc                    <  2:437711/93‑1 (MQ=255)
                                                                      tgtTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACa                   >  2:5076555/1‑93 (MQ=255)
                                                                       gtTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAg                  <  1:1349217/93‑1 (MQ=255)
                                                                        ttGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGc                 >  1:7773206/1‑93 (MQ=255)
                                                                          gATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGccc               <  1:7144559/93‑1 (MQ=255)
                                                                           aTTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCt              <  1:1021678/93‑1 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt             >  1:3754921/1‑93 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt             <  2:3296568/93‑1 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt             <  1:6034449/93‑1 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt             <  2:7915627/93‑1 (MQ=255)
                                                                             tCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTc            >  1:5964195/1‑93 (MQ=255)
                                                                              cGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcg           >  2:3470771/1‑93 (MQ=255)
                                                                               taTAGGGCTGGTCATTTACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgc          <  1:2342112/92‑1 (MQ=255)
                                                                               gATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgc          <  1:4637967/93‑1 (MQ=255)
                                                                                aTAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgcg         >  2:7277547/1‑93 (MQ=255)
                                                                                  aGGGCTTGTCATTGACTGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGc       <  2:2103978/93‑1 (MQ=255)
                                                                                   gggCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCt      >  2:5707060/1‑93 (MQ=255)
                                                                                     gCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGt    >  1:3335636/1‑93 (MQ=255)
                                                                                       tGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAg  <  1:4034307/93‑1 (MQ=255)
                                                                                       tGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAg  >  1:4607540/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAG  >  NC_000913/4531338‑4531517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: