BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,560,261	C→T	intergenic (‑17/+51)	yjiJ ← / ← yjiK	putative transport protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,560,261	0	C	T	100.0%	1284.6 / NA	351	intergenic (‑17/+51)	yjiJ/yjiK	putative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (154/197); total (154/197)

Only 100 of 364 total aligned reads displayed.

CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560169‑4560350

  aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         <  1:5013546/93‑1 (MQ=255)

  aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         <  2:1897838/93‑1 (MQ=255)

   aGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAtt                                                                                        >  2:7482131/1‑93 (MQ=255)

    ggTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       >  1:4651194/1‑93 (MQ=255)

    ggTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       <  1:7847099/93‑1 (MQ=255)

    agTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       <  1:3901431/92‑1 (MQ=255)

     gTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAtttt                                                                                      <  1:4445973/93‑1 (MQ=255)

      tCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTTTTAttttt                                                                                     <  2:1680193/93‑1 (MQ=255)

      tCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttttt                                                                                     <  2:6957913/93‑1 (MQ=255)

       cAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttg                                                                                    <  1:124559/93‑1 (MQ=255)

       cAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttg                                                                                    <  1:4074646/93‑1 (MQ=255)

        aGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgt                                                                                   <  2:2825473/93‑1 (MQ=255)

          aaCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgttg                                                                                 <  2:3514912/93‑1 (MQ=255)

           aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  1:67943/93‑1 (MQ=255)

           aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  2:2254898/93‑1 (MQ=255)

            ccAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTgttgtt                                                                               <  1:5564352/93‑1 (MQ=255)

            ccAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTgttgtt                                                                               >  2:7209078/1‑93 (MQ=255)

             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              <  2:302984/93‑1 (MQ=255)

             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              <  2:5315337/93‑1 (MQ=255)

             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              >  1:7171819/1‑93 (MQ=255)

               gCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAc                                                                            >  1:5440186/1‑93 (MQ=255)

               gCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAc                                                                            >  1:4800361/1‑93 (MQ=255)

                cATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACa                                                                           <  1:6470131/93‑1 (MQ=255)

                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  1:7609956/1‑93 (MQ=255)

                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  2:6512350/1‑93 (MQ=255)

                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         <  2:4722181/93‑1 (MQ=255)

                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  1:4274157/1‑93 (MQ=255)

                      gAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaa                                                                     >  2:5207102/1‑93 (MQ=255)

                       aaaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaat                                                                    <  2:7644004/93‑1 (MQ=255)

                         aaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaataa                                                                  >  1:5361038/1‑93 (MQ=255)

                            cgcgGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACTAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaa                                                               <  1:196584/93‑1 (MQ=255)

                               ggTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaaaa                                                            <  1:3549890/93‑1 (MQ=255)

                                gTGCTTAAAGAAAAGCGTTGTGCGTGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           <  1:4960467/93‑1 (MQ=255)

                                gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           >  2:4175791/1‑93 (MQ=255)

                                gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           >  1:6917907/1‑93 (MQ=255)

                                 tGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAgg                                                          >  2:2976667/1‑93 (MQ=255)

                                  gCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGt                                                         >  1:3744803/1‑93 (MQ=255)

                                    tGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGa                                                       <  2:7866384/93‑1 (MQ=255)

                                     gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      >  1:631865/1‑93 (MQ=255)

                                     gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      <  2:6112217/93‑1 (MQ=255)

                                      aaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAg                                                     <  2:7124373/93‑1 (MQ=255)

                                       aagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGc                                                    <  1:2695877/93‑1 (MQ=255)

                                        agaaaGACGGTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:3026072/93‑1 (MQ=255)

                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAAGCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   >  2:584982/1‑93 (MQ=255)

                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:4294409/93‑1 (MQ=255)

                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  2:4442086/93‑1 (MQ=255)

                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:4527363/93‑1 (MQ=255)

                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  2:5963928/93‑1 (MQ=255)

                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  >  2:5426467/1‑93 (MQ=255)

                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  >  2:4694041/1‑93 (MQ=255)

                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  1:6616093/93‑1 (MQ=255)

                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  1:247869/93‑1 (MQ=255)

                                           aaaGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGc                                                <  1:2594756/93‑1 (MQ=255)

                                                gTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGcc                                           <  2:2120030/93‑1 (MQ=255)

                                                 ttCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAAGAAAAAGGTGAAGCATGCCAGCCt                                          >  2:4299404/1‑93 (MQ=255)

                                                 ttCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCt                                          >  1:1836703/1‑93 (MQ=255)

                                                  tCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTg                                         <  2:5499207/93‑1 (MQ=255)

                                                    tACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGtt                                       >  1:1065272/1‑93 (MQ=255)

                                                     aCGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTa                                      <  1:1606936/93‑1 (MQ=255)

                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     >  1:3400044/1‑93 (MQ=255)

                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     >  2:3076260/1‑93 (MQ=255)

                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     <  2:1948450/93‑1 (MQ=255)

                                                       gggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAt                                    <  1:1002102/93‑1 (MQ=255)

                                                        ggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATg                                   <  2:2392500/93‑1 (MQ=255)

                                                        ggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATg                                   <  2:5756575/93‑1 (MQ=255)

                                                            gCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgat                               <  1:615939/93‑1 (MQ=255)

                                                             cGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatg                              <  1:2847338/93‑1 (MQ=255)

                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  1:1736732/93‑1 (MQ=255)

                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  2:1494384/93‑1 (MQ=255)

                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  2:2602405/93‑1 (MQ=255)

                                                                ggACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGAtt                           <  1:2012946/93‑1 (MQ=255)

                                                                 gACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTg                          <  2:7572851/93‑1 (MQ=255)

                                                                  aCGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGa                         <  1:7691601/93‑1 (MQ=255)

                                                                   cGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAg                        >  2:3857931/1‑93 (MQ=255)

                                                                   cGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAg                        >  2:4531072/1‑93 (MQ=255)

                                                                    gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       <  1:3241351/93‑1 (MQ=255)

                                                                    gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       >  2:6743459/1‑93 (MQ=255)

                                                                     aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  1:7246709/93‑1 (MQ=255)

                                                                     aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  1:4737317/93‑1 (MQ=255)

                                                                      aGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgggg                     >  1:7504773/1‑93 (MQ=255)

                                                                       ggCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGt                    >  1:811748/1‑93 (MQ=255)

                                                                       ggCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGt                    <  1:135563/93‑1 (MQ=255)

                                                                           tGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAg                >  2:5616041/1‑93 (MQ=255)

                                                                            gTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGc               <  2:5093674/93‑1 (MQ=255)

                                                                             tttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCg              <  1:3133073/93‑1 (MQ=255)

                                                                              ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             >  2:6658945/1‑93 (MQ=255)

                                                                              ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             >  2:6376152/1‑93 (MQ=255)

                                                                                 aCCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaa          <  1:1936475/93‑1 (MQ=255)

                                                                                  ccTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaa         >  1:6249039/1‑93 (MQ=255)

                                                                                   cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        >  1:2340365/1‑93 (MQ=255)

                                                                                   cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        <  1:2629833/93‑1 (MQ=255)

                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATcaaaa       >  2:4015049/1‑93 (MQ=255)

                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       <  2:1236205/93‑1 (MQ=255)

                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       >  2:3360820/1‑93 (MQ=255)

                                                                                     tgtttgttATTTTTGTTGTTAACTAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGCGGGGTAAAGCGATAAAAAc      <  1:7002480/93‑1 (MQ=255)

                                                                                     tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      <  1:3594765/93‑1 (MQ=255)

                                                                                     tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      >  2:3658920/1‑93 (MQ=255)

                                                                                       tttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGa    >  1:512005/1‑93 (MQ=255)

                                                                                         tgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAtt  <  2:1026155/93‑1 (MQ=255)

                                                                                         tgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAtt  <  1:5955566/93‑1 (MQ=255)

CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560169‑4560350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`