BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,606,400	G→A	Q62Q (CAG→CAA)	yjjG →	putative phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,606,400	0	G	A	99.7%	1282.1 / NA	365	Q62Q (CAG→CAA)	yjjG	putative phosphatase
Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (201/162); total (201/164)
Fisher's exact test for biased strand distribution p-value = 4.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 377 total aligned reads displayed.

CACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAGCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGA  >  NC_000913/4606310‑4606489

cACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACt                                                                                         >  2:3153611/1‑93 (MQ=255)

 cccTTTACCGCTAAAGATTTTCAGGACTATCAGCCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACtt                                                                                        <  2:3990041/92‑1 (MQ=255)

 aCCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACtt                                                                                        >  2:5237819/1‑93 (MQ=255)

  cttttACCGCTGAAGTTTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTc                                                                                       <  2:512358/91‑1 (MQ=255)

    tttCCCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAg                                                                                     <  2:5298101/93‑1 (MQ=255)

      tACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCa                                                                                   >  1:3218775/1‑93 (MQ=255)

        ccGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACg                                                                                 >  2:3208844/1‑93 (MQ=255)

         cGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACgg                                                                                >  1:496124/1‑93 (MQ=255)

          gCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACggg                                                                               >  1:3153362/1‑93 (MQ=255)

           cTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGc                                                                              >  2:1566190/1‑93 (MQ=255)

           cTGAAGATTTTCAGAACTATCAGCCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGc                                                                              <  1:1997002/93‑1 (MQ=255)

            tGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCg                                                                             >  1:2321999/1‑93 (MQ=255)

            tGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCg                                                                             >  1:1020663/1‑93 (MQ=255)

             gAAGATTATCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCgg                                                                            >  1:4144066/1‑93 (MQ=255)

              aaGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGt                                                                           <  2:623205/93‑1 (MQ=255)

               aGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGtt                                                                          >  2:2900762/1‑93 (MQ=255)

                  ttttCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTga                                                                       >  2:4934747/1‑93 (MQ=255)

                  ttttCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTga                                                                       <  1:7216744/93‑1 (MQ=255)

                   tttCAGGACTATCGGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTgag                                                                      <  1:5642138/93‑1 (MQ=255)

                        ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTg                                                                 <  1:7504432/93‑1 (MQ=255)

                        ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACAGGCGGTTTGAGAGCTg                                                                 >  2:7656613/1‑93 (MQ=255)

                         gACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTgg                                                                >  1:1817704/1‑93 (MQ=255)

                          aCTATCAGGACGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTggg                                                               >  2:6426394/1‑93 (MQ=255)

                           cTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGc                                                              >  2:4357506/1‑93 (MQ=255)

                           cTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGc                                                              >  2:6778095/1‑93 (MQ=255)

                           cTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTCGAGAGCTGGGc                                                              >  1:1625773/1‑93 (MQ=255)

                            tATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGcg                                                             >  2:2388322/1‑92 (MQ=255)

                             aTCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCg                                                            >  2:4196218/1‑93 (MQ=255)

                             aTCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCg                                                            >  2:2726831/1‑93 (MQ=255)

                                aGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAAc                                                         <  1:267822/93‑1 (MQ=255)

                                 ggCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACg                                                        >  2:1297530/1‑93 (MQ=255)

                                 ggCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACg                                                        >  2:200933/1‑93 (MQ=255)

                                   ccGTAAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGc                                                      <  2:707799/93‑1 (MQ=255)

                                     gTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTg                                                    >  2:2767378/1‑93 (MQ=255)

                                      ttAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGa                                                   >  1:5299157/1‑93 (MQ=255)

                                       tAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGaa                                                  <  2:4747287/93‑1 (MQ=255)

                                       tAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGaa                                                  <  1:3732758/93‑1 (MQ=255)

                                         aCAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACg                                                >  2:6850267/1‑93 (MQ=255)

                                         aCAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACg                                                <  1:7632896/93‑1 (MQ=255)

                                          aaaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGt                                               <  2:1813067/92‑1 (MQ=255)

                                           aaGCCACTGTGGGTGGATTATCAAACCGGCGCGATCACTTCATTACCACCTCAGCACGGGCGGTTTTAGAGCTGGGCCGAACCGCTGAACGTc                                              >  1:79822/1‑93 (MQ=255)

                                           aaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGCACGTc                                              >  1:4293056/1‑93 (MQ=255)

                                           aaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTc                                              <  1:4734219/93‑1 (MQ=255)

                                           aaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTc                                              >  1:7833028/1‑93 (MQ=255)

                                           aaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTc                                              <  2:484593/93‑1 (MQ=255)

                                            aGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCg                                             <  2:5614234/93‑1 (MQ=255)

                                            aGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCg                                             <  2:1051180/93‑1 (MQ=255)

                                             gCCACTGTGGGTGGATTATCGAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGa                                            >  2:2227101/1‑93 (MQ=255)

                                             gCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGa                                            >  2:7553733/1‑93 (MQ=255)

                                             gCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGa                                            <  2:2603735/93‑1 (MQ=255)

                                             gCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGa                                            >  2:4499009/1‑93 (MQ=255)

                                              ccACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAg                                           >  1:3829217/1‑93 (MQ=255)

                                               cACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGc                                          >  2:5767971/1‑93 (MQ=255)

                                                aCTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGcc                                         <  2:6007133/93‑1 (MQ=255)

                                                aCTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGcc                                         >  2:3773068/1‑93 (MQ=255)

                                                  tgtgGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAg                                       <  2:3485219/93‑1 (MQ=255)

                                                      ggtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTaa                                   >  2:651439/1‑93 (MQ=255)

                                                       gtggATTCTCAACACGGCGCGATCCCTTCATTACACCTTCCGCACGGGCGGTTTGCGAGCTGGGCCAAACGGCTGAACGTCGAGCCAGGTaaa                                  <  2:7222645/93‑1 (MQ=255)

                                                       gtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTaaa                                  <  2:1690697/93‑1 (MQ=255)

                                                           aTTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCa                              >  1:4020284/1‑93 (MQ=255)

                                                            ttATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCaa                             <  1:557866/93‑1 (MQ=255)

                                                            ttATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCaa                             >  1:1267235/1‑93 (MQ=255)

                                                            ttATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCaa                             <  2:331015/93‑1 (MQ=255)

                                                             tATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAAc                            >  2:211174/1‑93 (MQ=255)

                                                             tATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAAc                            >  1:5716353/1‑93 (MQ=255)

                                                             tATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAAc                            <  2:5483194/93‑1 (MQ=255)

                                                             tATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAAc                            <  2:461048/93‑1 (MQ=255)

                                                                cAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGaa                         <  1:6883608/93‑1 (MQ=255)

                                                                cAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGaa                         <  1:1924833/93‑1 (MQ=255)

                                                                 aaaaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAg                        >  2:1404574/1‑93 (MQ=255)

                                                                   aaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGcc                      <  1:2870819/93‑1 (MQ=255)

                                                                   aaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGcc                      >  1:7068323/1‑93 (MQ=255)

                                                                        cgcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttat                 <  2:3622903/93‑1 (MQ=255)

                                                                         gcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttatt                <  1:6550314/93‑1 (MQ=255)

                                                                         gcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttata                >  1:5999243/1‑92 (MQ=255)

                                                                           gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  1:4493182/93‑1 (MQ=255)

                                                                           gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              >  2:6323354/1‑93 (MQ=255)

                                                                           gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  1:5815057/93‑1 (MQ=255)

                                                                           gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  2:3560502/93‑1 (MQ=255)

                                                                           gATCACTTCATTACAACTTCAGCACGGGCGGGTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              >  1:6298437/1‑93 (MQ=255)

                                                                           gATAACTTCATTACACCTTCAGCACGGGCGGTTGGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  1:4655296/93‑1 (MQ=255)

                                                                            gtCACTTCATTACAACTTCAGCACGGTCGGTTTGAGAGCTGGGCCGAACGGCTAAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             <  2:469890/92‑1 (MQ=255)

                                                                            aTCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             <  2:5034556/93‑1 (MQ=255)

                                                                            aTCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             <  1:7409832/93‑1 (MQ=255)

                                                                            aTCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             >  2:4049621/1‑93 (MQ=255)

                                                                             tCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATg            <  2:4288596/93‑1 (MQ=255)

                                                                              cACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGc           >  2:792405/1‑93 (MQ=255)

                                                                                cTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGa         <  2:1912391/93‑1 (MQ=255)

                                                                                cTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGa         <  1:5113878/93‑1 (MQ=255)

                                                                                 ttCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        <  2:3839965/93‑1 (MQ=255)

                                                                                 ttCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        <  1:6747001/93‑1 (MQ=255)

                                                                                 ttCATTACAACGTCAGCGCGGCCGGTTTGAGAGCTGGGCCGAACGCCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        <  2:611930/93‑1 (MQ=255)

                                                                                  tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       <  1:6787106/93‑1 (MQ=255)

                                                                                  tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       >  1:242448/1‑93 (MQ=255)

                                                                                  tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       >  1:108078/1‑93 (MQ=255)

                                                                                   cATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATgg      <  1:310350/93‑1 (MQ=255)

                                                                                    aTTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGc     >  2:6683519/1‑93 (MQ=255)

                                                                                    aTTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGc     >  1:5542422/1‑93 (MQ=255)

                                                                                       aCAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGa  >  1:3504491/1‑93 (MQ=255)

                                                                                       aCAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGa  >  2:730165/1‑93 (MQ=255)

CACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAGCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGA  >  NC_000913/4606310‑4606489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`