BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	578,967	T→C	intergenic (‑108/‑136)	ybcV ← / → ybcW	putative envelope protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	578,967	0	T	C	100.0%	1010.3 / NA	319	intergenic (‑108/‑136)	ybcV/ybcW	putative envelope protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (178/141); total (178/141)

Only 100 of 328 total aligned reads displayed.

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  2:1116397/93‑1 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        >  2:1516865/1‑93 (MQ=255)

  aTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCgg                                                                                       >  1:6860766/1‑93 (MQ=255)

   tCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGt                                                                                      >  2:6401385/1‑93 (MQ=255)

   tCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGt                                                                                      >  2:6576303/1‑93 (MQ=255)

    cTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTc                                                                                     <  2:293697/93‑1 (MQ=255)

        tCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 <  1:101745/93‑1 (MQ=255)

         cTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgct                                                                                <  2:30332/93‑1 (MQ=255)

          tGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgctg                                                                               >  2:3229736/1‑93 (MQ=255)

          tGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgctg                                                                               >  2:4194525/1‑93 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              <  1:6008999/93‑1 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              <  1:370428/93‑1 (MQ=255)

            gccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTACCAAAGCGCCGTCCTGCTGGc                                                                             <  1:5822915/92‑1 (MQ=255)

             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            >  1:4304271/1‑93 (MQ=255)

              ctctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAt                                                                           <  2:976319/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         >  1:6981769/1‑93 (MQ=255)

                  ttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTg                                                                       >  2:365402/1‑93 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  1:3420087/93‑1 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  1:4517143/93‑1 (MQ=255)

                       ttttGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAggg                                                                  >  1:1366722/1‑93 (MQ=255)

                         ttgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaa                                                                >  1:3293611/1‑93 (MQ=255)

                         ttgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaa                                                                >  2:7913959/1‑93 (MQ=255)

                          tgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaaa                                                               <  1:5006719/93‑1 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             >  2:620354/1‑93 (MQ=255)

                             tgatgaTTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATAc                                                            >  2:287913/1‑93 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           >  2:825841/1‑93 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           <  2:5547674/93‑1 (MQ=255)

                               atgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACaa                                                          <  1:3110491/93‑1 (MQ=255)

                               atgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACaa                                                          >  2:6101333/1‑93 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         <  1:1627158/93‑1 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        >  1:232638/1‑93 (MQ=255)

                                   tttATGTCAAATATTAGGAGTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCGGCTGGCATTCTGGAGGGAAATACAACCGa                                                      <  1:4427257/93‑1 (MQ=255)

                                     tATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACa                                                    <  1:7212916/93‑1 (MQ=255)

                                      aTGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAg                                                   >  1:2407020/1‑93 (MQ=255)

                                       tGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGa                                                  <  2:3531314/93‑1 (MQ=255)

                                       tGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGa                                                  >  2:6729178/1‑93 (MQ=255)

                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                <  2:906815/93‑1 (MQ=255)

                                           aaaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgta                                              >  1:4094445/1‑93 (MQ=255)

                                            aaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtat                                             <  2:689649/93‑1 (MQ=255)

                                            aaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtat                                             >  2:2534253/1‑93 (MQ=255)

                                               atTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAtgtatgta                                          >  2:2136173/1‑93 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:140981/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGCCCTGCTGGCATTATGGAGGGCAATACAACCGACAGATGTATGTaa                                         >  1:2502734/1‑93 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        >  2:2182750/1‑93 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        >  2:7429420/1‑93 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        >  1:3220015/1‑93 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      >  1:5143658/1‑93 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGCATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGTAATACAACCGACAGATGTATGTAAGGc                                      >  2:5004090/1‑93 (MQ=255)

                                                     aaTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCa                                    >  1:2936323/1‑93 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  1:871419/1‑93 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                <  1:3917471/93‑1 (MQ=255)

                                                          tttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTg                               <  1:4890305/93‑1 (MQ=255)

                                                           ttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCACCGTGc                              >  2:1019062/1‑93 (MQ=255)

                                                           ttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGc                              >  2:4632038/1‑93 (MQ=255)

                                                            tCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCt                             <  1:1737729/93‑1 (MQ=255)

                                                             cAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGACAACGTGCta                            >  2:2620031/1‑92 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGCGGGCAATACAACCGACAGATGTATGTAAGTCCAACGCGCTCa                           >  1:6194164/1‑93 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCa                           >  1:5474621/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  2:7211447/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  1:7926258/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  1:5773744/1‑93 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         >  2:5897295/1‑93 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         >  1:2792326/1‑93 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         <  1:7728259/93‑1 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGACCAACGTGCTCaaa                         >  2:4831466/1‑93 (MQ=255)

                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        >  1:7490989/1‑93 (MQ=255)

                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        >  2:848813/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  2:2323959/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:4007979/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:6650067/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:199490/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  2:1321326/1‑93 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     <  2:4724840/93‑1 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCa                   >  2:7666273/1‑93 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCa                   >  1:5115863/1‑93 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCCTCa                   >  1:93455/1‑93 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCCACAGATGTATGTAAGGCCCACGTGCTCAAACCTTCa                   >  1:5330217/1‑93 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  1:3627546/1‑93 (MQ=255)

                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 <  1:7111486/93‑1 (MQ=255)

                                                                        aTTGGTTGCCTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 <  2:2444356/93‑1 (MQ=255)

                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATAAAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATaa                >  1:1901284/1‑92 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCTGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               <  1:3568133/93‑1 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               <  2:3866180/93‑1 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               <  1:220868/93‑1 (MQ=255)

                                                                            gTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGa             <  2:5770376/93‑1 (MQ=255)

                                                                            gTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGa             >  1:4736267/1‑93 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:2041420/93‑1 (MQ=255)

                                                                               gCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAg          >  1:6408570/1‑93 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCGTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        >  2:5217449/1‑93 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        >  2:1785592/1‑93 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAAAGAAAGAtt       >  1:6210699/1‑93 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:4432459/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:3324109/93‑1 (MQ=255)

                                                                                    aCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTg     <  2:4524176/93‑1 (MQ=255)

                                                                                    aCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTg     <  1:7597872/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  1:2662756/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  2:7813495/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  1:1515776/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  1:1182796/93‑1 (MQ=255)

                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  >  2:4357450/1‑93 (MQ=255)

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`