BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	595,469	A→G	Q216R (CAG→CGG)	ylcB →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	595,469	0	A	G	100.0%	755.2 / NA	244	Q216R (CAG→CGG)	ylcB	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (139/105); total (139/105)

Only 100 of 257 total aligned reads displayed.

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

ccGAAGAATCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACggg                                                                                         <  2:4112301/93‑1 (MQ=255)

 cGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGc                                                                                        <  2:950862/93‑1 (MQ=255)

 cGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGc                                                                                        >  1:7646900/1‑93 (MQ=255)

 cGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGc                                                                                        <  2:7254002/93‑1 (MQ=255)

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       >  1:6698086/1‑93 (MQ=255)

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       >  1:1223293/1‑93 (MQ=255)

     gaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTTGCGCTGGAACGGGTTcgc                                                                                    >  1:5964751/1‑93 (MQ=255)

     gaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgc                                                                                    <  1:6150659/93‑1 (MQ=255)

     gaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgc                                                                                    >  2:4929411/1‑93 (MQ=255)

     gaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgc                                                                                    >  2:4776231/1‑93 (MQ=255)

     aaaaCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgc                                                                                    <  2:2646662/92‑1 (MQ=255)

       aaCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCgg                                                                                  >  2:7727778/1‑93 (MQ=255)

        aCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggg                                                                                 >  2:5392114/1‑93 (MQ=255)

        aCGCTGCGTAATTATCAGCAGTCATATGCGATTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggg                                                                                 >  1:5917245/1‑93 (MQ=255)

          gCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGt                                                                               <  2:7334022/93‑1 (MQ=255)

            tGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGa                                                                             >  2:5707760/1‑93 (MQ=255)

            tGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGa                                                                             >  1:3284971/1‑93 (MQ=255)

              cGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATa                                                                           <  1:4638937/93‑1 (MQ=255)

              cGTAATTATAAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATa                                                                           <  1:6227783/93‑1 (MQ=255)

               gTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAg                                                                          >  2:1143408/1‑93 (MQ=255)

                 aaTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGaa                                                                        <  1:4356420/93‑1 (MQ=255)

                  aTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGaaa                                                                       >  2:701307/1‑93 (MQ=255)

                   ttATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAg                                                                      >  2:60559/1‑93 (MQ=255)

                      tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAc                                                                   <  2:6833028/93‑1 (MQ=255)

                       cagcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGGTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAcc                                                                  >  2:4633616/1‑93 (MQ=255)

                         gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCg                                                                <  2:2175945/93‑1 (MQ=255)

                         gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCg                                                                >  2:7260360/1‑93 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               <  2:3126547/93‑1 (MQ=255)

                           agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              <  1:4045069/93‑1 (MQ=255)

                           agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              >  1:1569281/1‑93 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             >  1:7350775/1‑93 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             >  2:1648647/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            >  2:5631725/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            >  1:6975769/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            <  1:1376565/93‑1 (MQ=255)

                              cATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCg                                                           >  2:7070467/1‑93 (MQ=255)

                               atatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGa                                                          >  1:4652354/1‑93 (MQ=255)

                                tatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGAc                                                         <  1:3993254/93‑1 (MQ=255)

                                tatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCACAGCGAc                                                         >  1:5380649/1‑93 (MQ=255)

                                 atGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACa                                                        <  1:1968863/93‑1 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       >  2:3202708/1‑93 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       <  1:4142878/93‑1 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGCAGCAGCAATGTTCTGGCGCTGGAACGCGCTCGCGGGGTGATAGAAAATACCCACAGCGACac                                                       >  1:5210610/1‑92 (MQ=255)

                                     gTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGc                                                    >  1:1010611/1‑93 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  2:5962787/1‑93 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  2:1826823/1‑93 (MQ=255)

                                       ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  1:7270738/1‑93 (MQ=255)

                                       ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  2:3023692/1‑93 (MQ=255)

                                          tCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               >  2:7673413/1‑93 (MQ=255)

                                          tCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               >  1:5008385/1‑93 (MQ=255)

                                           cGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACg                                              <  2:3830770/93‑1 (MQ=255)

                                             aaaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTc                                            >  1:7455298/1‑93 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  2:2594020/93‑1 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  1:6480258/93‑1 (MQ=255)

                                               aaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAg                                          <  1:2254147/93‑1 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         <  2:3619131/93‑1 (MQ=255)

                                                 acaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggg                                        >  1:943586/1‑93 (MQ=255)

                                                 acaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggg                                        <  2:3199370/93‑1 (MQ=255)

                                                  caacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgggg                                       >  1:1085197/1‑93 (MQ=255)

                                                   aacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggggg                                      >  1:1441406/1‑93 (MQ=255)

                                                     cTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGCGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgggggca                                    >  2:5195796/1‑91 (MQ=255)

                                                      tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   >  1:2913240/1‑93 (MQ=255)

                                                       gTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACt                                  <  1:3385211/93‑1 (MQ=255)

                                                       gTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACt                                  <  1:1211059/93‑1 (MQ=255)

                                                        ttGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTg                                 <  1:356642/93‑1 (MQ=255)

                                                         tGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTgg                                >  2:6953122/1‑93 (MQ=255)

                                                          gACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgc                               <  1:2629751/93‑1 (MQ=255)

                                                          gACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgc                               >  1:2323124/1‑93 (MQ=255)

                                                            cAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgcgc                             <  2:4328058/93‑1 (MQ=255)

                                                            cAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgcgc                             >  2:1770704/1‑93 (MQ=255)

                                                              ggTAGCCGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  2:6718361/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  2:5585215/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:6193137/93‑1 (MQ=255)

                                                                tAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGc                         >  2:2831982/1‑93 (MQ=255)

                                                                 aGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCg                        >  1:1504038/1‑93 (MQ=255)

                                                                 aGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGGGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCg                        >  1:2971339/1‑93 (MQ=255)

                                                                   cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGGGaa                      >  2:7849947/1‑93 (MQ=255)

                                                                   cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      <  1:7688163/93‑1 (MQ=255)

                                                                   cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      >  1:69098/1‑93 (MQ=255)

                                                                    aGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAACCGTCAGGGGGAACTGGCGCAGGCGaaa                     >  1:6573938/1‑92 (MQ=255)

                                                                    aGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaat                     >  2:4163762/1‑93 (MQ=255)

                                                                    aGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaat                     >  2:6501206/1‑93 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    >  2:4115149/1‑93 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    <  2:442948/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  1:2567376/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  2:5143113/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  2:4151689/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  1:5793054/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  2:3453315/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  1:3793865/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  2:2276930/93‑1 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  >  2:5868349/1‑93 (MQ=255)

                                                                            tCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAtt             <  2:1223293/93‑1 (MQ=255)

                                                                            tCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAtt             <  2:845132/93‑1 (MQ=255)

                                                                              tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTga           >  2:876980/1‑92 (MQ=255)

                                                                              tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGc           <  2:6619608/93‑1 (MQ=255)

                                                                              tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGc           <  1:4772726/93‑1 (MQ=255)

                                                                                  gcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACt       >  2:1495006/1‑93 (MQ=255)

                                                                                   cTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTg      >  1:6156634/1‑93 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  2:7773295/93‑1 (MQ=255)

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`