Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 61,392 A→G Y625H (TAT→CAT)  hepA ← putative ATP‑dependent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091361,3920AG99.4% 1012.3 / ‑6.1 320Y625H (TAT→CAT) hepAputative ATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base G (148/170);  total (150/170)
Fisher's exact test for biased strand distribution p-value = 2.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 331 total aligned reads displayed.

CCAGATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGAC  >  NC_000913/61302‑61481
                                                                                          |                                                                                         
 cAGATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCa                                                                                        >  1:5610761/1‑93 (MQ=255)
 cAGATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCa                                                                                        <  1:6895609/93‑1 (MQ=255)
   gATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgc                                                                                      >  2:2858011/1‑93 (MQ=255)
   gATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgc                                                                                      >  2:7845640/1‑93 (MQ=255)
    aTAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgcg                                                                                     >  2:4722393/1‑93 (MQ=255)
    aTAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgcg                                                                                     >  2:5305410/1‑93 (MQ=255)
    aTAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgcg                                                                                     >  2:1017090/1‑93 (MQ=255)
    aTAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAgcg                                                                                     >  1:264684/1‑93 (MQ=255)
      aGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCa                                                                                   >  1:2327443/1‑93 (MQ=255)
        ttAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCAcc                                                                                 >  1:4664019/1‑93 (MQ=255)
        ttAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCAcc                                                                                 >  1:1924697/1‑93 (MQ=255)
          aaTCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAg                                                                               >  1:4240888/1‑93 (MQ=255)
            tCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGcc                                                                             >  2:7180415/1‑92 (MQ=255)
            tCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCa                                                                             >  2:1886317/1‑93 (MQ=255)
            tCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCa                                                                             >  1:3478636/1‑93 (MQ=255)
            tCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCa                                                                             >  1:5490831/1‑93 (MQ=255)
            tCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCa                                                                             >  2:3418069/1‑93 (MQ=255)
             cAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCAc                                                                            <  2:1233732/93‑1 (MQ=255)
                aTCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGa                                                                         <  2:4795863/93‑1 (MQ=255)
                   gTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGGAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTg                                                                      <  2:2239710/93‑1 (MQ=255)
                   gTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTg                                                                      >  1:1008247/1‑93 (MQ=255)
                    ttGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGa                                                                     >  2:5183324/1‑93 (MQ=255)
                    ttGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGa                                                                     <  1:1192882/93‑1 (MQ=255)
                    ttGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGa                                                                     >  1:1295352/1‑93 (MQ=255)
                      gTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGc                                                                   <  1:3851657/93‑1 (MQ=255)
                        ataCGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCgg                                                                 >  1:7688185/1‑93 (MQ=255)
                         taCGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGt                                                                >  2:4551865/1‑93 (MQ=255)
                          aCGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTCAGCggct                                                               >  2:657671/1‑91 (MQ=255)
                           cGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGttt                                                              <  2:3590245/93‑1 (MQ=255)
                            gCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGtttt                                                             >  1:4924204/1‑93 (MQ=255)
                            gCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGtttt                                                             >  2:2366609/1‑93 (MQ=255)
                             cTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtc                                                            <  2:3746137/93‑1 (MQ=255)
                             cTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGAATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtc                                                            >  1:7349896/1‑93 (MQ=255)
                             cTATCGTAAATAGGGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtc                                                            <  2:2099973/93‑1 (MQ=255)
                              tATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtct                                                           >  2:5386774/1‑93 (MQ=255)
                               aTCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtctc                                                          >  2:1121156/1‑93 (MQ=255)
                               aTCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTtctc                                                          >  1:3009277/1‑93 (MQ=255)
                               aTCGTAAATAGTGCGGCCGGTCGGGCAGGTGTCCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCCCCAGCACCGACTGAGCGGTTTtctc                                                          <  2:1470748/93‑1 (MQ=255)
                                 cGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCa                                                        <  2:6450009/93‑1 (MQ=255)
                                   tAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGa                                                      >  2:3166587/1‑93 (MQ=255)
                                   tAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGa                                                      <  1:3650947/93‑1 (MQ=255)
                                     aaTAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATa                                                    <  2:2592901/93‑1 (MQ=255)
                                      aTAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATaa                                                   <  1:6243911/93‑1 (MQ=255)
                                      aTAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATaa                                                   <  1:3531006/93‑1 (MQ=255)
                                      aTAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATaa                                                   <  1:2754563/93‑1 (MQ=255)
                                      aTAGTGCGTCCGGTCGGCCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCCCCAGCACCGACTGAGCGGTTTTCTCCAGATaa                                                   <  2:4904734/93‑1 (MQ=255)
                                       tAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAg                                                  <  1:5241006/93‑1 (MQ=255)
                                        aGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAgg                                                 <  2:7642555/93‑1 (MQ=255)
                                           gCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGcac                                              <  1:2156772/93‑1 (MQ=255)
                                            cGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGcaca                                             <  1:5767951/93‑1 (MQ=255)
                                             gTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACAt                                            <  2:7325792/93‑1 (MQ=255)
                                             gTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACAt                                            <  2:1548345/93‑1 (MQ=255)
                                              tacGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTAGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATCAGGCACATg                                           >  2:700558/3‑93 (MQ=255)
                                              tCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATg                                           >  2:5079096/1‑93 (MQ=255)
                                              tCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATg                                           >  1:6639361/1‑93 (MQ=255)
                                              gccGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCATCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATg                                           <  2:6431907/92‑1 (MQ=255)
                                              gccGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATg                                           <  2:6261790/92‑1 (MQ=255)
                                               ccGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATgg                                          <  2:7888167/93‑1 (MQ=255)
                                                 ggTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGGTGTCTCCAGATAAGACACATGGAt                                        >  2:2681283/1‑93 (MQ=255)
                                                  gTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATc                                       >  1:6772306/1‑93 (MQ=255)
                                                   gcGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCt                                      <  2:6832131/92‑1 (MQ=255)
                                                    cGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTg                                     <  2:5258534/93‑1 (MQ=255)
                                                      ggCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGaa                                   >  2:7699624/1‑93 (MQ=255)
                                                      ggCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGaa                                   >  2:3379419/1‑93 (MQ=255)
                                                        cAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAata                                 <  1:7440353/93‑1 (MQ=255)
                                                        cAGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAata                                 <  1:1594805/93‑1 (MQ=255)
                                                         aGGTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGATTTCTCCAGATAAGGCACATGGATCTGAatat                                >  2:7397814/1‑93 (MQ=255)
                                                          ggTGTGCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATc                               <  2:846389/93‑1 (MQ=255)
                                                             gtgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTg                            <  2:381742/93‑1 (MQ=255)
                                                             gtgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTg                            <  1:1222505/93‑1 (MQ=255)
                                                             gtgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTg                            <  2:3616566/93‑1 (MQ=255)
                                                             gtgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTg                            <  1:3425307/93‑1 (MQ=255)
                                                             gtgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTg                            <  2:5745135/93‑1 (MQ=255)
                                                              tgCTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTgc                           <  1:7298222/93‑1 (MQ=255)
                                                                cTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTgcgc                         >  1:1701969/1‑93 (MQ=255)
                                                                cTCAAATGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTgcgc                         >  1:3087493/1‑93 (MQ=255)
                                                                   aaaTGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTg                      >  2:1797168/1‑93 (MQ=255)
                                                                     aTGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGc                    <  1:4770253/93‑1 (MQ=255)
                                                                      tGCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGcc                   <  2:598694/93‑1 (MQ=255)
                                                                       gCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCg                  >  2:3943506/1‑93 (MQ=255)
                                                                       gCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCg                  <  1:2862772/93‑1 (MQ=255)
                                                                       gCATCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCg                  <  1:5009407/93‑1 (MQ=255)
                                                                         aTCCAGGCCTTCGTGAAGCCAGCGCGCCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATGGTGCGCCTGGCCGAt                <  2:6748016/93‑1 (MQ=255)
                                                                         aTCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGAt                >  1:3917007/1‑93 (MQ=255)
                                                                          tCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATa               <  1:4196218/93‑1 (MQ=255)
                                                                          tCCAGACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATa               >  2:22779/1‑93 (MQ=255)
                                                                              gACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGAt           <  1:649173/93‑1 (MQ=255)
                                                                              gACCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGAt           <  1:4462944/93‑1 (MQ=255)
                                                                               aCCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATc          <  1:2371967/93‑1 (MQ=255)
                                                                               aCCTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATc          >  1:5278228/1‑93 (MQ=255)
                                                                                ccTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATcc         <  1:3810199/93‑1 (MQ=255)
                                                                                ccTTCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATcc         >  2:7571748/1‑93 (MQ=255)
                                                                                  ttCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAg       <  1:5989216/93‑1 (MQ=255)
                                                                                  ttCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAg       >  2:4292155/1‑93 (MQ=255)
                                                                                  ttCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAg       >  2:1334801/1‑93 (MQ=255)
                                                                                   tCGTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAga      <  1:5281635/93‑1 (MQ=255)
                                                                                     gTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACGTGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAgacg    <  2:4115369/93‑1 (MQ=255)
                                                                                     gTGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAgacg    >  1:246557/1‑93 (MQ=255)
                                                                                      tGATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAgacga   <  2:4287284/93‑1 (MQ=255)
                                                                                       gATGCCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGATTATCGTGCGCCTGGCCGATACGATCCAgacgac  >  1:7619709/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCAGATAGTTAATCAGATCGTTGTATACGCTATCGTAAATAGTGCGTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGAC  >  NC_000913/61302‑61481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: