Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 647,331 G→A D488D (GAC→GAT citF ← citrate lyase alpha chain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913647,3310GA99.6% 991.2 / NA 275D488D (GAC→GATcitFcitrate lyase alpha chain
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (151/123);  minor base C (0/1);  total (151/124)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 278 total aligned reads displayed.

TTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGGTCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGCTTC  >  NC_000913/647241‑647420
                                                                                          |                                                                                         
ttCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATc                                                                                         <  1:3037014/93‑1 (MQ=255)
 tCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCt                                                                                        >  2:2872225/1‑93 (MQ=255)
  cAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCtg                                                                                       >  2:4938152/1‑93 (MQ=255)
  cAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCtg                                                                                       <  2:6537693/93‑1 (MQ=255)
    ggAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCtgtg                                                                                     >  1:4734109/1‑93 (MQ=255)
     gAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGa                                                                                    >  2:4729246/1‑93 (MQ=255)
      aaGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGaa                                                                                   <  1:6240396/93‑1 (MQ=255)
      aaGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGaa                                                                                   <  1:5561361/93‑1 (MQ=255)
       agcagcTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACAGCAACGACGCGATCTGTGAAt                                                                                  <  2:1558244/93‑1 (MQ=255)
       aGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGACCTGTGAAt                                                                                  >  1:1456337/1‑93 (MQ=255)
           ggTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCaa                                                                              >  2:6335703/1‑93 (MQ=255)
           ggTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCaa                                                                              <  1:4513939/93‑1 (MQ=255)
           ggTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCaa                                                                              <  1:5666703/93‑1 (MQ=255)
             tGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATc                                                                            <  1:537223/93‑1 (MQ=255)
               cATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCgg                                                                          >  2:4586861/1‑93 (MQ=255)
                aTGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGc                                                                         >  2:3808275/1‑93 (MQ=255)
                 tGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCt                                                                        >  2:5781052/1‑93 (MQ=255)
                 tGGCTTATTCCTTCACCTGATGCACAACTCGATCACCGAGCCATCGCGGTAACGCACCACGGCAACGACGCGATCTGTGAATTCAATCGGCtg                                                                       >  1:7710434/1‑93 (MQ=255)
                  ggCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtg                                                                       >  2:2227918/1‑93 (MQ=255)
                   gCTTATTCCTTCCCCTCATCCACAACACCGATCACCGAGCCATCGCGGTAACCCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtgt                                                                      <  2:5689906/93‑1 (MQ=255)
                    gttATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtgtg                                                                     <  2:841556/92‑1 (MQ=255)
                    cTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtgtg                                                                     >  1:7561869/1‑93 (MQ=255)
                    cTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtgtg                                                                     >  1:6170548/1‑93 (MQ=255)
                    cTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCtgtg                                                                     <  2:3286004/93‑1 (MQ=255)
                     ttATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTgg                                                                    >  1:3178894/1‑93 (MQ=255)
                       aTTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGtt                                                                  >  2:22721/1‑93 (MQ=255)
                        ttCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTc                                                                 >  1:7197887/1‑93 (MQ=255)
                        ttCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTc                                                                 >  1:434263/1‑93 (MQ=255)
                          ccTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCAc                                                               <  1:5953120/93‑1 (MQ=255)
                          ccTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCAc                                                               >  2:6440853/1‑93 (MQ=255)
                          ccTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCAc                                                               <  2:3989049/93‑1 (MQ=255)
                           cTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCAcc                                                              <  2:4206308/93‑1 (MQ=255)
                            ttCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCg                                                             <  1:5504584/93‑1 (MQ=255)
                            ttCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCg                                                             >  1:5457171/1‑93 (MQ=255)
                             tCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCgg                                                            <  1:3146865/93‑1 (MQ=255)
                                   gATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTcagca                                                      <  1:114911/93‑1 (MQ=255)
                                   gATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTcagca                                                      >  2:7111759/1‑93 (MQ=255)
                                    aTGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTcagcag                                                     <  1:6854225/93‑1 (MQ=255)
                                     tGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGa                                                    <  2:7262755/93‑1 (MQ=255)
                                      tcacaACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAc                                                   <  2:3562790/92‑1 (MQ=255)
                                      gCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAc                                                   <  1:1729196/93‑1 (MQ=255)
                                        acaacaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAcgc                                                 >  1:3937098/1‑93 (MQ=255)
                                        acaacaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAcgc                                                 <  1:485799/93‑1 (MQ=255)
                                         caacaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAcgcg                                                >  1:7267113/1‑93 (MQ=255)
                                         caacaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGAcgcg                                                >  2:5055304/1‑93 (MQ=255)
                                           acaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCa                                              <  1:2296767/93‑1 (MQ=255)
                                           acaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCa                                              <  2:4424853/93‑1 (MQ=255)
                                           acaTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCa                                              <  1:2133815/93‑1 (MQ=255)
                                            caTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCAc                                             >  1:6758103/1‑93 (MQ=255)
                                             aTCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACg                                            >  2:5281810/1‑93 (MQ=255)
                                              tCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGt                                           <  2:1912642/93‑1 (MQ=255)
                                              tCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGt                                           <  1:3279834/93‑1 (MQ=255)
                                               cGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGtt                                          >  2:6800875/1‑93 (MQ=255)
                                                gATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTc                                         <  1:6611281/93‑1 (MQ=255)
                                                gATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTc                                         <  2:2374713/93‑1 (MQ=255)
                                                 aTCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcg                                        >  1:1789966/1‑93 (MQ=255)
                                                 aTCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcg                                        >  2:4994950/1‑93 (MQ=255)
                                                  tCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcgc                                       >  1:1800280/1‑93 (MQ=255)
                                                  tCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcgc                                       >  1:6460622/1‑93 (MQ=255)
                                                  tCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcgc                                       >  2:3056867/1‑93 (MQ=255)
                                                   cACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTcgcg                                      >  1:696292/1‑93 (MQ=255)
                                                     ccGATCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCa                                    >  2:5323339/1‑93 (MQ=255)
                                                     ccGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCa                                    >  2:2121477/1‑93 (MQ=255)
                                                      cGAGCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAg                                   >  1:5069233/1‑93 (MQ=255)
                                                         gCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCa                                >  2:7807237/1‑93 (MQ=255)
                                                         gCCATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCa                                >  1:5767571/1‑93 (MQ=255)
                                                          ccATCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCAc                               <  1:6866521/93‑1 (MQ=255)
                                                           cATCGCGGTAACGCACGACGGCAACGACGCTATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACt                              <  2:369956/93‑1 (MQ=255)
                                                            aTCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCTATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTc                             >  2:606625/1‑93 (MQ=255)
                                                            aTCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTc                             <  1:4815923/93‑1 (MQ=255)
                                                            aTCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTc                             <  2:641044/93‑1 (MQ=255)
                                                             tCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCa                            >  2:1380696/1‑93 (MQ=255)
                                                             tCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCa                            >  2:4310110/1‑93 (MQ=255)
                                                             tCGCGGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCa                            >  1:880010/1‑93 (MQ=255)
                                                               gcgGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAAt                          >  2:5450972/1‑93 (MQ=255)
                                                               gcgGTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAAt                          <  2:264502/93‑1 (MQ=255)
                                                                 ggTAACGCACAACGGCAACGACGCGATCTGTGAATTTAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTGCGGGGAGCCACTCAATgg                        >  2:3627612/1‑93 (MQ=255)
                                                                  gTAACGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTTACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGa                       >  2:6255104/1‑93 (MQ=255)
                                                                     aCGCACAACGGCAACGACGCGATCTGTGAATTCAATCGACTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAAc                    >  1:7463670/1‑93 (MQ=255)
                                                                      cGCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAAcc                   <  1:5729996/93‑1 (MQ=255)
                                                                       gCACAACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCa                  >  2:7068635/1‑93 (MQ=255)
                                                                         acaACGGCAACGACGCGCTCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACt                <  1:251475/93‑1 (MQ=255)
                                                                         acaACGGCAACGACGCGATCTGTGAATTCAATCGACTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACt                >  2:1885079/1‑93 (MQ=255)
                                                                          caACGGCACCGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACtt               <  2:410662/93‑1 (MQ=255)
                                                                          caACGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACtt               <  1:7804426/93‑1 (MQ=255)
                                                                          caACGGCAACGACGCGATCTGTGAATTCAATCGACTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACtt               <  2:1014372/93‑1 (MQ=255)
                                                                           aaCGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACttt              >  1:977095/1‑93 (MQ=255)
                                                                           aaCGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACttt              <  2:2505786/93‑1 (MQ=255)
                                                                             cGGCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTaa            <  1:2807484/93‑1 (MQ=255)
                                                                             cGGCAACGACGCGATCTGTGAATTCAATCGACTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTaa            <  1:2496942/93‑1 (MQ=255)
                                                                              ggCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAAt           <  2:5739409/93‑1 (MQ=255)
                                                                              ggCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAAt           <  2:3257299/93‑1 (MQ=255)
                                                                              ggCAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAAt           >  1:5002762/1‑93 (MQ=255)
                                                                              ggCAACGACGCGATCTGTAAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAAt           <  2:5954505/93‑1 (MQ=255)
                                                                                cAACGACGCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGc         <  1:4106399/93‑1 (MQ=255)
                                                                                    gacgCGATCTGTGAATTCAATCTGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGc     <  1:6360594/93‑1 (MQ=255)
                                                                                    gacgCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGc     <  1:4407011/93‑1 (MQ=255)
                                                                                    gacgCGATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGc     <  1:1283366/93‑1 (MQ=255)
                                                                                      cgcgATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGCtt   >  1:1917072/1‑93 (MQ=255)
                                                                                      cgcgATCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGCt  >  2:6006171/1‑92 (MQ=255)
                                                                                          |                                                                                         
TTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGGTCTGTGAATTCAATCGGCTGTGGTTCACCGGTCAGCAGACGCGCACGTTCGCGCAGCCACTCAATGGAAACCACTTTAATGCCCGCTTC  >  NC_000913/647241‑647420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: