BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	652,748	A→G	T431A (ACC→GCC)	citA →	putative sensor‑type protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	652,748	0	A	G	100.0%	849.0 / NA	271	T431A (ACC→GCC)	citA	putative sensor‑type protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/162); total (109/162)

Only 100 of 277 total aligned reads displayed.

GGTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTA  >  NC_000913/652658‑652837

         gaGCGCGCCCGGGAACTGGGGATAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCa                                                                                <  1:7473615/92‑1 (MQ=255)

         cAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCa                                                                                <  1:3323231/93‑1 (MQ=255)

         cAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCa                                                                                <  1:6028366/93‑1 (MQ=255)

           gcgcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGc                                                                              >  2:3862626/1‑93 (MQ=255)

           gcgcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGc                                                                              >  2:2373480/1‑93 (MQ=255)

             gcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCa                                                                            <  2:5028407/93‑1 (MQ=255)

             gcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCa                                                                            >  2:196782/1‑93 (MQ=255)

              cgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAt                                                                           <  1:3655098/93‑1 (MQ=255)

              cgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAt                                                                           <  1:3486560/93‑1 (MQ=255)

               gcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAtt                                                                          <  2:6851367/93‑1 (MQ=255)

               gcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAtt                                                                          <  2:1059658/93‑1 (MQ=255)

                cccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtg                                                                         <  2:2133022/93‑1 (MQ=255)

                accGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGCTTGCAGCCATtg                                                                         >  1:6114019/2‑93 (MQ=255)

                 ccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtgt                                                                        <  2:342812/93‑1 (MQ=255)

                 ccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtgt                                                                        >  1:4030921/1‑93 (MQ=255)

                   gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCCGCCATtgtcg                                                                      >  2:4955905/1‑91 (MQ=255)

                       gcTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCaa                                                                  <  1:2392526/92‑1 (MQ=255)

                        cTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAt                                                                 >  1:4313686/1‑93 (MQ=255)

                        cTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAt                                                                 >  2:5861677/1‑93 (MQ=255)

                        cTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAt                                                                 <  1:6345428/93‑1 (MQ=255)

                         tGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAtt                                                                <  1:5601920/93‑1 (MQ=255)

                          ggggCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAttt                                                               >  2:1458840/1‑93 (MQ=255)

                          ggggCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAttt                                                               <  2:1815128/93‑1 (MQ=255)

                            ggCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGTACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTAc                                                             <  2:2771296/93‑1 (MQ=255)

                              cTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACtt                                                           <  2:791999/93‑1 (MQ=255)

                              cTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACtt                                                           <  1:2133737/93‑1 (MQ=255)

                                aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         <  1:4578856/93‑1 (MQ=255)

                                 aaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGAt                                                        >  1:3247179/1‑93 (MQ=255)

                                 aaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGAt                                                        <  1:1685754/93‑1 (MQ=255)

                                 aaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGAt                                                        >  1:1174907/1‑93 (MQ=255)

                                 aaaaTGATCATTGTCACCCGCAGCAAGCTATACCAGCTGCCGCCAGGAACGGATAGAACCGAGTTTTAACCCCTTGAGGGCAATTTACTTGAt                                                        >  2:2232602/1‑93 (MQ=255)

                                  aaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATa                                                       >  1:4153915/1‑93 (MQ=255)

                                   aaTGTTCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATaa                                                      <  2:3532527/93‑1 (MQ=255)

                                   aaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATaa                                                      <  2:7327256/93‑1 (MQ=255)

                                   aaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATaa                                                      <  2:4269714/93‑1 (MQ=255)

                                   aaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATaa                                                      >  2:6681312/1‑93 (MQ=255)

                                    aTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAAc                                                     <  2:5451620/93‑1 (MQ=255)

                                    aTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAAc                                                     <  2:1268209/93‑1 (MQ=255)

                                    aTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAAc                                                     >  1:5465123/1‑93 (MQ=255)

                                    aTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAAc                                                     <  1:6936926/93‑1 (MQ=255)

                                        tCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCt                                                 <  2:6542394/93‑1 (MQ=255)

                                        tCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCt                                                 >  1:3796256/1‑93 (MQ=255)

                                        tCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCt                                                 >  2:4029495/1‑93 (MQ=255)

                                        tCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGCTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCt                                                 >  2:7137473/1‑93 (MQ=255)

                                          gttGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGTGCTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTc                                               <  1:2546121/92‑1 (MQ=255)

                                          aTTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCCGCCATTGTGGGCAATTTACTTGATAACGCCTTc                                               >  1:7639256/1‑93 (MQ=255)

                                            tGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGa                                             >  2:1566215/1‑93 (MQ=255)

                                             gTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGaa                                            <  1:4971716/93‑1 (MQ=255)

                                               ccccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagc                                          >  2:5343514/1‑93 (MQ=255)

                                               ccccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagc                                          <  1:5167612/93‑1 (MQ=255)

                                                  cGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccag                                       >  2:526362/1‑93 (MQ=255)

                                                   cgTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagc                                      <  1:151274/92‑1 (MQ=255)

                                                    gTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagcc                                     >  2:4854612/1‑93 (MQ=255)

                                                    gTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagcc                                     <  1:638997/93‑1 (MQ=255)

                                                    gTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagcc                                     <  2:759769/93‑1 (MQ=255)

                                                    gTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagcc                                     <  2:7073259/93‑1 (MQ=255)

                                                     tAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTTGAACCCAGCCt                                    >  1:510061/1‑93 (MQ=255)

                                                     tAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCt                                    <  1:3680257/93‑1 (MQ=255)

                                                        ccAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCg                                 <  1:7817661/93‑1 (MQ=255)

                                                         cAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGt                                >  1:4856611/1‑93 (MQ=255)

                                                         cAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGt                                >  2:7263738/1‑93 (MQ=255)

                                                             tttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCg                            >  2:7499859/1‑93 (MQ=255)

                                                             tttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCg                            <  2:637386/93‑1 (MQ=255)

                                                              ttCGCAACTGCCTCTAGGACTGGATAGCGCTGAGTGTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGATGCCAGCCTGCGTAGCGa                           <  2:1660244/93‑1 (MQ=255)

                                                              ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           <  2:5502146/93‑1 (MQ=255)

                                                              ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           >  1:5523312/1‑93 (MQ=255)

                                                               tCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGAt                          <  2:7681981/93‑1 (MQ=255)

                                                               tCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGAt                          <  2:7787251/93‑1 (MQ=255)

                                                               tCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGAt                          <  1:2742839/93‑1 (MQ=255)

                                                               tCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGAt                          >  2:6597525/1‑93 (MQ=255)

                                                                  cAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGag                       >  2:2693608/1‑92 (MQ=255)

                                                                  cAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGaa                       <  2:6158340/93‑1 (MQ=255)

                                                                  cAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGaa                       <  2:2939988/93‑1 (MQ=255)

                                                                   aaCTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAg                      <  1:512982/93‑1 (MQ=255)

                                                                     cTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGa                    >  2:4664463/1‑93 (MQ=255)

                                                                     cTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGa                    <  2:3302748/93‑1 (MQ=255)

                                                                      tGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGaa                   <  1:6177439/93‑1 (MQ=255)

                                                                       gccgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGaaa                  <  1:3382223/93‑1 (MQ=255)

                                                                       gccgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGaaa                  <  2:5945318/93‑1 (MQ=255)

                                                                        ccgcgAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAAc                 <  2:3006870/93‑1 (MQ=255)

                                                                         cgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCTTACCGATGAAGGAAACa                >  1:4850355/1‑93 (MQ=255)

                                                                         cgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACa                >  1:471761/1‑93 (MQ=255)

                                                                         cgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACa                <  2:5624584/93‑1 (MQ=255)

                                                                           ccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAg              >  2:1008083/1‑93 (MQ=255)

                                                                            cAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGa             <  2:3152048/93‑1 (MQ=255)

                                                                            cAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGa             <  2:2741086/93‑1 (MQ=255)

                                                                            cAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGACAGCCTGCGTAGCGATGAAGTAAACAAGa             >  1:4070133/1‑93 (MQ=255)

                                                                             aGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGAt            >  2:692976/1‑93 (MQ=255)

                                                                              ggACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATc           <  1:4428965/93‑1 (MQ=255)

                                                                               gACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCg          <  1:2811126/93‑1 (MQ=255)

                                                                               gACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCg          <  1:7195759/93‑1 (MQ=255)

                                                                                aCTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGt         >  2:3715589/1‑93 (MQ=255)

                                                                                 cTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGtt        <  1:6694943/93‑1 (MQ=255)

                                                                                  tGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTg       >  2:520491/1‑93 (MQ=255)

                                                                                   ggATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGa      <  1:188010/93‑1 (MQ=255)

                                                                                   ggATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGa      >  2:2570068/1‑93 (MQ=255)

                                                                                    gATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGTAAACAAGATCGTTGaa     <  1:3422656/93‑1 (MQ=255)

                                                                                     aTAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAat    <  1:2634661/93‑1 (MQ=255)

                                                                                     aTAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAat    >  1:2195334/1‑93 (MQ=255)

                                                                                      tAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAatt   >  1:107205/1‑93 (MQ=255)

GGTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTA  >  NC_000913/652658‑652837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`