BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	658,840	A→G	R200R (CGT→CGC)	lipA ←	lipoate synthesis

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	658,840	0	A	G	100.0%	826.4 / NA	260	R200R (CGT→CGC)	lipA	lipoate synthesis
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (140/120); total (140/120)

Only 100 of 265 total aligned reads displayed.

GGTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATACGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATC  >  NC_000913/658750‑658929

 gTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATgcgc                                                                                        >  1:1896775/1‑93 (MQ=255)

     ggATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTa                                                                                    <  2:171772/93‑1 (MQ=255)

        tttCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGt                                                                                 >  1:4042755/1‑93 (MQ=255)

        tttCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGt                                                                                 >  2:5971011/1‑93 (MQ=255)

         ttCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGtt                                                                                >  2:4779490/1‑93 (MQ=255)

          tCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGttt                                                                               <  2:7362019/93‑1 (MQ=255)

            cGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTc                                                                             >  2:5735608/1‑93 (MQ=255)

             ggATGCGCTTCTTTCAAGCGCTCCGCCAGCTTCAGCGACCAGTTGTAATCTCCCCCAGGCCGTACCTGACGGTAGATGCGCGGTACGTTTTcc                                                                            <  2:1280566/93‑1 (MQ=255)

             ggATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTcc                                                                            >  2:312800/1‑93 (MQ=255)

               aTGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAg                                                                          >  2:6944621/1‑93 (MQ=255)

                tGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAgg                                                                         >  2:6229890/1‑93 (MQ=255)

                tGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAgg                                                                         <  2:5813815/93‑1 (MQ=255)

                 gcgcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGt                                                                        >  2:4265993/1‑93 (MQ=255)

                   gcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTa                                                                      >  1:1578204/1‑93 (MQ=255)

                   gcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACATTTTCCAGGTTa                                                                      >  1:5440504/1‑93 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     >  2:3097695/1‑93 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     <  1:7177193/93‑1 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     <  1:6416301/93‑1 (MQ=255)

                     ttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATg                                                                    >  2:7379592/1‑93 (MQ=255)

                     ttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATg                                                                    <  1:3658687/93‑1 (MQ=255)

                      tcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATgg                                                                   >  2:3404386/1‑93 (MQ=255)

                      tcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATgg                                                                   <  2:5387255/93‑1 (MQ=255)

                      tcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATgg                                                                   <  1:4163857/93‑1 (MQ=255)

                       cttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGt                                                                  >  2:6957438/1‑93 (MQ=255)

                        tttAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGtt                                                                 >  2:4212365/1‑93 (MQ=255)

                        tttAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGtt                                                                 >  1:6851319/1‑93 (MQ=255)

                         ttAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTg                                                                >  1:6256647/1‑93 (MQ=255)

                         ttAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTg                                                                >  2:4170997/1‑93 (MQ=255)

                          tAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGa                                                               <  1:481437/93‑1 (MQ=255)

                           aaaGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGaa                                                              >  1:837005/1‑93 (MQ=255)

                           aaaGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGaa                                                              >  1:2679378/1‑93 (MQ=255)

                            aaGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAac                                                             <  2:7264701/93‑1 (MQ=255)

                            aaGCGTCCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAac                                                             <  2:1548588/93‑1 (MQ=255)

                             aGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAaca                                                            >  1:5883508/1‑93 (MQ=255)

                              gCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAacac                                                           <  1:986034/93‑1 (MQ=255)

                              gCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAacac                                                           >  1:6268212/1‑93 (MQ=255)

                                gTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACAt                                                         <  1:3024286/93‑1 (MQ=255)

                                gTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACAt                                                         >  1:738097/1‑93 (MQ=255)

                                 ttCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATc                                                        >  2:2323489/1‑93 (MQ=255)

                                 ttCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATc                                                        <  1:6599033/93‑1 (MQ=255)

                                  tCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCt                                                       <  2:140266/93‑1 (MQ=255)

                                  tCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCt                                                       <  2:6702538/93‑1 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      <  1:5632962/93‑1 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      <  2:5471745/93‑1 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      <  1:5461568/93‑1 (MQ=255)

                                       cagcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtggtgg                                                  >  1:940527/1‑93 (MQ=255)

                                         gcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCg                                                >  2:2148717/1‑93 (MQ=255)

                                         gcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTANGGTTGAACACATCTGGTGGCg                                                >  1:4661562/1‑93 (MQ=255)

                                           ttCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGtt                                              >  1:2874525/1‑93 (MQ=255)

                                             cAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGc                                            <  2:6267734/93‑1 (MQ=255)

                                             cAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGc                                            <  2:7646505/93‑1 (MQ=255)

                                             cAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGc                                            <  1:3539965/93‑1 (MQ=255)

                                             cAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGGAAATGCGCGGTACGTTTTCCAGGGTATGGTTGAACACATCTGGTGGCGTTGc                                            >  1:1708558/1‑93 (MQ=255)

                                               gCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAg                                          >  1:6187628/1‑93 (MQ=255)

                                               gCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAg                                          <  2:5313145/93‑1 (MQ=255)

                                                  aCCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCa                                       <  2:1252249/93‑1 (MQ=255)

                                                  aCCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCa                                       <  2:6363639/93‑1 (MQ=255)

                                                   ccAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAg                                      >  2:3633920/1‑93 (MQ=255)

                                                     aGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGaa                                    <  1:2171835/93‑1 (MQ=255)

                                                       ttGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGGAGAACACAGCTGGTGGAGATGCAGTCAGCata                                  >  1:1447919/1‑93 (MQ=255)

                                                       ttGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGGTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAata                                  >  1:3284086/1‑93 (MQ=255)

                                                          tAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATcc                               >  1:7771148/1‑93 (MQ=255)

                                                          tAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATcc                               <  2:5777319/93‑1 (MQ=255)

                                                           aaTCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCa                              <  2:6853834/93‑1 (MQ=255)

                                                            aTCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCag                             <  2:1604457/93‑1 (MQ=255)

                                                             tCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCaga                            >  2:2790223/1‑93 (MQ=255)

                                                             tCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCaga                            <  1:2327675/93‑1 (MQ=255)

                                                               tGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGc                          >  1:4768940/1‑93 (MQ=255)

                                                               tGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGc                          <  1:7860863/93‑1 (MQ=255)

                                                               tGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTAGCGTTGCAGTCAGAATATCCAGAGc                          >  1:25749/1‑93 (MQ=255)

                                                                gCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCGGAATATCCAGAGCa                         >  2:4397058/1‑93 (MQ=255)

                                                                gCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCa                         >  1:4931549/1‑93 (MQ=255)

                                                                   ccAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGa                      >  2:6755668/1‑93 (MQ=255)

                                                                    cAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGAt                     >  2:2899390/1‑93 (MQ=255)

                                                                     aGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATc                    >  2:2060135/1‑93 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATcc                   >  1:7226292/1‑92 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  <  2:6180888/93‑1 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  >  1:474894/1‑93 (MQ=255)

                                                                       gCCATACCTAACGGTAAATGCTCCGTACGTTTTCCAGGTTATCGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  <  1:5711096/93‑1 (MQ=255)

                                                                        ccGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCAt                 >  2:5550310/1‑93 (MQ=255)

                                                                         cGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATa                >  2:7800671/1‑93 (MQ=255)

                                                                          gTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATAc               >  1:6561985/1‑93 (MQ=255)

                                                                          gTACCTGACGGTAAATGCGCGGTACGTTTTCCAGATTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATAc               >  2:4953944/1‑93 (MQ=255)

                                                                           tACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACg              >  2:5110355/1‑93 (MQ=255)

                                                                            aCCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCACAATATCCAGAGCACGATCCATACGa             <  2:7443245/93‑1 (MQ=255)

                                                                             ccTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAc            >  2:2645783/1‑93 (MQ=255)

                                                                             ccTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAc            <  1:3951152/93‑1 (MQ=255)

                                                                              cTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAcc           >  2:1138687/1‑93 (MQ=255)

                                                                              cTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAcc           <  1:3447466/93‑1 (MQ=255)

                                                                                  cGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCgg       <  2:4523355/93‑1 (MQ=255)

                                                                                   ggTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACTACCGCGGa      >  1:1194208/1‑93 (MQ=255)

                                                                                   ggTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGa      <  1:3333135/93‑1 (MQ=255)

                                                                                   ggTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGa      >  1:452174/1‑93 (MQ=255)

                                                                                    gTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGaa     >  1:5242034/1‑93 (MQ=255)

                                                                                     tAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGaaa    <  1:3894881/93‑1 (MQ=255)

                                                                                      aaaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAAt   >  1:6921416/1‑93 (MQ=255)

                                                                                      aaaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAAt   >  2:2714937/1‑93 (MQ=255)

                                                                                       aaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATc  <  1:5200198/93‑1 (MQ=255)

                                                                                       aaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATc  <  1:6702427/93‑1 (MQ=255)

                                                                                       aaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATc  <  2:659574/93‑1 (MQ=255)

GGTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATACGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATC  >  NC_000913/658750‑658929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`