BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	689,228	T→C	S293G (AGC→GGC)	lnt ←	apolipoprotein N‑acyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	689,228	0	T	C	100.0%	838.9 / NA	268	S293G (AGC→GGC)	lnt	apolipoprotein N‑acyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/145); total (123/145)

Only 100 of 274 total aligned reads displayed.

CACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAA  >  NC_000913/689138‑689317

cACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCTCGGATACCAGCGAGCCAc                                                                                         >  1:79604/1‑93 (MQ=255)

 cccTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCAcc                                                                                        <  1:2663551/92‑1 (MQ=255)

 aCCTTTACCCAGCGTGATGCTGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGATACCAGCGAGCCAcc                                                                                        >  2:6898400/1‑93 (MQ=255)

 aCCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCAcc                                                                                        <  2:866454/93‑1 (MQ=255)

 aCCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCAcc                                                                                        >  1:4066436/1‑93 (MQ=255)

  ccTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCt                                                                                       <  1:2359453/93‑1 (MQ=255)

  ccTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCt                                                                                       >  1:2856932/1‑93 (MQ=255)

   cTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGGGTCGACAATCCCGTTTAACAGCGACCCACCtt                                                                                      >  1:6350708/1‑93 (MQ=255)

   cTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCtt                                                                                      >  1:3305357/1‑93 (MQ=255)

     ttACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTa                                                                                    <  2:5977787/93‑1 (MQ=255)

      tACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTAt                                                                                   <  2:4636085/93‑1 (MQ=255)

      tACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTAt                                                                                   >  2:5314637/1‑93 (MQ=255)

       aCCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATc                                                                                  <  2:4696044/93‑1 (MQ=255)

        cccAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCa                                                                                 >  2:5598421/1‑93 (MQ=255)

           aGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGc                                                                              >  1:596931/1‑93 (MQ=255)

             cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCaa                                                                            <  1:475711/93‑1 (MQ=255)

             cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCaa                                                                            <  2:5742006/93‑1 (MQ=255)

              gTGATGATGTTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAAc                                                                           <  1:6816713/93‑1 (MQ=255)

              gTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAAc                                                                           <  1:6086743/93‑1 (MQ=255)

              gTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAAc                                                                           >  1:5665571/1‑93 (MQ=255)

               tgatgaTGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACt                                                                          >  2:4120363/1‑93 (MQ=255)

                gatgatGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTc                                                                         <  2:4551188/93‑1 (MQ=255)

                   gatgGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCAcc                                                                      <  1:1424704/93‑1 (MQ=255)

                   gatgGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCAcc                                                                      <  2:7230480/93‑1 (MQ=255)

                    atgGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCg                                                                     >  2:623788/1‑93 (MQ=255)

                    atgGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCg                                                                     >  1:738313/1‑93 (MQ=255)

                     tgGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGt                                                                    >  2:243847/1‑93 (MQ=255)

                        tgttgtAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCa                                                                 <  1:4099655/93‑1 (MQ=255)

                          ttgtAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGt                                                               <  2:3576624/93‑1 (MQ=255)

                            gtAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGc                                                             <  2:2233425/93‑1 (MQ=255)

                              aGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCtt                                                           <  2:443033/93‑1 (MQ=255)

                              aGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCtt                                                           <  1:6131230/93‑1 (MQ=255)

                               ggTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCttt                                                          <  2:6671632/93‑1 (MQ=255)

                                 tATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGa                                                        >  1:4433859/1‑93 (MQ=255)

                                   tCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAgg                                                      <  2:2807838/93‑1 (MQ=255)

                                    cGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGa                                                     <  1:6879766/93‑1 (MQ=255)

                                    cGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGAAACCAGCGAGCCACCTTTATCACGCAACTCACCATCCAGTGCTTTGAGGa                                                     <  2:7036171/93‑1 (MQ=255)

                                      tAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAAc                                                   >  2:5054473/1‑93 (MQ=255)

                                      tAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAAc                                                   <  2:5906937/93‑1 (MQ=255)

                                        gCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACgg                                                 >  2:3226095/1‑93 (MQ=255)

                                        gCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACgg                                                 >  1:2127478/1‑93 (MQ=255)

                                         cGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGt                                                <  1:1903719/93‑1 (MQ=255)

                                           gTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTg                                              >  2:2181151/1‑93 (MQ=255)

                                            ttCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGc                                             >  2:7656926/1‑93 (MQ=255)

                                            ttCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGc                                             >  2:4336394/1‑93 (MQ=255)

                                            ttCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGc                                             <  2:7333151/93‑1 (MQ=255)

                                            ttCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGc                                             >  2:2653436/1‑93 (MQ=255)

                                             tCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCt                                            >  1:7832471/1‑93 (MQ=255)

                                              cTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTg                                           >  2:6562299/1‑93 (MQ=255)

                                               tGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGa                                          >  1:1027281/1‑93 (MQ=255)

                                               tGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGa                                          >  2:100845/1‑93 (MQ=255)

                                                gCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGAt                                         <  2:7569893/93‑1 (MQ=255)

                                                 cTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGAtt                                        >  1:7609453/1‑93 (MQ=255)

                                                 cTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGAtt                                        <  1:4652584/93‑1 (MQ=255)

                                                  ttATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTa                                       <  2:3820252/93‑1 (MQ=255)

                                                  ttATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTa                                       >  1:4363721/1‑93 (MQ=255)

                                                  ttATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTa                                       >  1:4625056/1‑93 (MQ=255)

                                                   tATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTaa                                      <  1:1526030/93‑1 (MQ=255)

                                                   tATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTaa                                      >  2:6778244/1‑93 (MQ=255)

                                                    aTTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAt                                     >  1:3708161/1‑93 (MQ=255)

                                                    aTTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAt                                     >  1:4932211/1‑93 (MQ=255)

                                                     ttGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAtt                                    <  1:2922733/93‑1 (MQ=255)

                                                     ttGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAtt                                    <  1:5845348/93‑1 (MQ=255)

                                                      tGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAttt                                   <  2:3654491/93‑1 (MQ=255)

                                                       gagaCGCGCGTCGACAATCCCGGTTGCCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTc                                  <  2:3746362/93‑1 (MQ=255)

                                                         gaCGCGCGTCGACAATCCCGGTTACCAGCGAGCCGCCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCa                                >  2:4728853/1‑93 (MQ=255)

                                                         gaCGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCa                                >  2:3894492/1‑93 (MQ=255)

                                                         gaCGCGCGTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCa                                >  1:74794/1‑93 (MQ=255)

                                                           cgcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGa                              <  2:1826048/93‑1 (MQ=255)

                                                           cgcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGa                              >  1:3864756/1‑93 (MQ=255)

                                                           cgcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGa                              >  1:5036292/1‑93 (MQ=255)

                                                           cgcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGa                              <  1:6490554/93‑1 (MQ=255)

                                                           cgcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGa                              <  1:6518897/93‑1 (MQ=255)

                                                            gcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGAt                             <  2:1325667/93‑1 (MQ=255)

                                                            gcgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGAt                             <  1:7179378/93‑1 (MQ=255)

                                                             cgcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATc                            <  1:6904502/93‑1 (MQ=255)

                                                             cgcgCCGTCAATCCCGGTCACCAGCGAGCCCCCTTGATCACCCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATc                            <  1:6237915/93‑1 (MQ=255)

                                                              gcgTCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCg                           >  2:4875861/1‑93 (MQ=255)

                                                                 tCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGtt                        >  2:3412015/1‑93 (MQ=255)

                                                                 tCGACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGtt                        >  1:3235775/1‑93 (MQ=255)

                                                                   gACAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTAt                      >  2:1206642/1‑93 (MQ=255)

                                                                    ataaTCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATc                     <  1:5532957/91‑1 (MQ=255)

                                                                    aCAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATc                     <  1:3472267/93‑1 (MQ=255)

                                                                     cAATCCCGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCg                    <  1:1147247/93‑1 (MQ=255)

                                                                          ccGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGAc               >  2:4206228/1‑93 (MQ=255)

                                                                          ccGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGAc               <  2:5133897/93‑1 (MQ=255)

                                                                          ccGGTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGAc               >  2:198357/1‑93 (MQ=255)

                                                                            ggTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTc             >  1:7253133/1‑93 (MQ=255)

                                                                            ggTTACCAGCGAACCCCCTCTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAAATTTCAGATAGGTTATCGTCGACTc             >  2:778843/1‑93 (MQ=255)

                                                                             gTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTcc            <  2:1260961/93‑1 (MQ=255)

                                                                             gTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTcc            <  2:6409750/93‑1 (MQ=255)

                                                                             gTTACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTcc            >  1:4876701/1‑93 (MQ=255)

                                                                               tACCAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCgg          <  2:5561023/93‑1 (MQ=255)

                                                                                 ccAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGcc        >  1:1088854/1‑93 (MQ=255)

                                                                                 ccAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGcc        <  1:6754536/93‑1 (MQ=255)

                                                                                  cAGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCa       >  1:1209426/1‑93 (MQ=255)

                                                                                   aGCGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAg      <  2:1459480/93‑1 (MQ=255)

                                                                                     cGAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGAt    <  1:66748/93‑1 (MQ=255)

                                                                                      gAGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATa   <  1:127237/93‑1 (MQ=255)

                                                                                       aGCCACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATaa  <  1:310428/93‑1 (MQ=255)

CACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAA  >  NC_000913/689138‑689317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`