BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	827,018	C→T	S396N (AGT→AAT)	ybhF ←	YbhF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	827,018	0	C	T	100.0%	750.1 / NA	208	S396N (AGT→AAT)	ybhF	YbhF
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (109/99); total (109/99)

Only 100 of 219 total aligned reads displayed.

AAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCC  >  NC_000913/826928‑827107

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                       >  2:278614/1‑93 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                       <  2:5410458/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                       <  1:5420309/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                       <  2:5929483/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                       >  1:2851100/1‑93 (MQ=255)

    aGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCtt                                                                                     >  1:1726635/1‑93 (MQ=255)

    aGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCtt                                                                                     <  2:1389474/93‑1 (MQ=255)

        tAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAg                                                                                 >  1:4214892/1‑93 (MQ=255)

        tAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAg                                                                                 <  1:7504213/93‑1 (MQ=255)

          aaTTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGat                                                                               <  2:336241/93‑1 (MQ=255)

           aTTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatc                                                                              <  1:6278789/93‑1 (MQ=255)

             tCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatcca                                                                            >  2:1204920/1‑93 (MQ=255)

             tCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatcca                                                                            >  1:47273/1‑93 (MQ=255)

               tGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatccatc                                                                          >  2:7024726/1‑93 (MQ=255)

               tGTTCGACCGTCAGGGTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCACGCTTTACCGGAATTCTCTTTCAGatccatc                                                                          >  2:5016139/1‑93 (MQ=255)

                gTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatccatcc                                                                         <  1:5904105/93‑1 (MQ=255)

                 ttCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATccc                                                                        <  1:798712/93‑1 (MQ=255)

                  tCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATcccc                                                                       <  2:1032498/93‑1 (MQ=255)

                  tCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATcccc                                                                       >  1:6802896/1‑93 (MQ=255)

                   cGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCa                                                                      <  1:3993993/93‑1 (MQ=255)

                   cGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCa                                                                      <  2:152188/93‑1 (MQ=255)

                   cGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCa                                                                      <  1:2936327/93‑1 (MQ=255)

                     aCCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGc                                                                    <  2:4434731/93‑1 (MQ=255)

                      ccGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCa                                                                   >  2:1639822/1‑93 (MQ=255)

                      ccGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCa                                                                   >  1:7889760/1‑93 (MQ=255)

                      ccGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCa                                                                   >  2:4971229/1‑93 (MQ=255)

                        gTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCAcc                                                                 >  1:1786780/1‑93 (MQ=255)

                             gTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcgc                                                            <  2:3443910/93‑1 (MQ=255)

                             gTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcgc                                                            >  2:7442622/1‑93 (MQ=255)

                              ttACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGcc                                                           <  1:3343641/93‑1 (MQ=255)

                                aCCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTg                                                         >  1:6740059/1‑93 (MQ=255)

                                aCCGTAGAGCGAAAATTTTTGCGCCATAGAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTg                                                         <  1:6007967/93‑1 (MQ=255)

                                   gTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGcc                                                      >  2:3613230/1‑93 (MQ=255)

                                    tAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCg                                                     >  1:3579779/1‑93 (MQ=255)

                                    tAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCg                                                     <  1:4539168/93‑1 (MQ=255)

                                     agagCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCgg                                                    >  1:123151/1‑93 (MQ=255)

                                      gagCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGa                                                   >  2:4912186/1‑93 (MQ=255)

                                       agCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGag                                                  >  2:7691930/1‑92 (MQ=255)

                                       agCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGaa                                                  >  1:4370066/1‑93 (MQ=255)

                                       agCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGaa                                                  >  1:757720/1‑93 (MQ=255)

                                        gCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGTCTGGCCGGAAg                                                 <  2:6208304/93‑1 (MQ=255)

                                        gCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAg                                                 >  1:6787230/1‑93 (MQ=255)

                                         cGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGt                                                <  2:789544/93‑1 (MQ=255)

                                         cGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGt                                                >  1:6857944/1‑93 (MQ=255)

                                          gAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTc                                               <  1:127876/93‑1 (MQ=255)

                                           aaaaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCg                                              >  1:6160943/1‑93 (MQ=255)

                                           aaaaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCg                                              >  2:2188177/1‑93 (MQ=255)

                                            aaaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCgg                                             >  1:7770107/1‑93 (MQ=255)

                                            aaaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCgg                                             <  1:5758024/93‑1 (MQ=255)

                                             aaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGc                                            <  2:1347911/93‑1 (MQ=255)

                                              aTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGGCGGCa                                           >  2:7182638/1‑93 (MQ=255)

                                               tttttGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCAc                                          <  2:7305710/93‑1 (MQ=255)

                                                  ttGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAg                                       <  2:4295406/93‑1 (MQ=255)

                                                   tGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGc                                      >  2:4972325/1‑93 (MQ=255)

                                                     cgcCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCTCCTGGCCGGAAGTCGGCACCAGCaa                                    <  2:6623482/93‑1 (MQ=255)

                                                      gcCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCaaa                                   <  1:319209/93‑1 (MQ=255)

                                                      gcCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCaaa                                   >  1:5003723/1‑93 (MQ=255)

                                                       ccATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAc                                  <  1:858405/93‑1 (MQ=255)

                                                        cATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAcc                                 >  1:7103996/1‑93 (MQ=255)

                                                        cATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAcc                                 <  1:3850385/93‑1 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                               >  2:5178878/1‑93 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                               >  2:4027694/1‑93 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                               >  1:4265338/1‑93 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                               >  1:4484578/1‑93 (MQ=255)

                                                             aGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGcaca                            <  1:5963609/93‑1 (MQ=255)

                                                              gCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcat                           <  2:2400901/93‑1 (MQ=255)

                                                               gcGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatc                          <  2:2637708/92‑1 (MQ=255)

                                                                cGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatca                         >  1:4635115/1‑93 (MQ=255)

                                                                cGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatca                         <  1:1657047/93‑1 (MQ=255)

                                                                cGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatca                         >  2:1891371/1‑93 (MQ=255)

                                                                 gagaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatcat                        <  2:2736950/93‑1 (MQ=255)

                                                                   gaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCt                      <  1:4066679/93‑1 (MQ=255)

                                                                    aTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCtt                     >  1:700602/1‑93 (MQ=255)

                                                                    aTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCtt                     >  2:606856/1‑93 (MQ=255)

                                                                     tGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTa                    >  2:692829/1‑93 (MQ=255)

                                                                     tGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTa                    >  1:7685774/1‑93 (MQ=255)

                                                                     tGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTa                    >  2:2164481/1‑93 (MQ=255)

                                                                     tGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTa                    >  2:3191537/1‑93 (MQ=255)

                                                                       cTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTaaa                  <  1:2909667/93‑1 (MQ=255)

                                                                          gcgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggg               >  2:1461638/1‑92 (MQ=255)

                                                                           cgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCCCCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggtg              <  2:171640/93‑1 (MQ=255)

                                                                           cgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggtg              <  2:4842868/93‑1 (MQ=255)

                                                                           cgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggtg              <  1:3692841/93‑1 (MQ=255)

                                                                             cgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggtggt            >  1:1137883/1‑93 (MQ=255)

                                                                             cgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggtggt            <  2:1560547/93‑1 (MQ=255)

                                                                              gcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTc           <  2:5767216/93‑1 (MQ=255)

                                                                               cTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCg          >  2:438867/1‑93 (MQ=255)

                                                                                 tgaCCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGAt        <  2:3902862/91‑1 (MQ=255)

                                                                                  tACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGAtt       >  2:1097630/1‑93 (MQ=255)

                                                                                    ccGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTa     >  1:2203596/1‑93 (MQ=255)

                                                                                     cGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAc    >  2:3675217/1‑93 (MQ=255)

                                                                                     cGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAc    >  2:2896840/1‑93 (MQ=255)

                                                                                      ggAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAcc   >  1:663389/1‑93 (MQ=255)

                                                                                      ggAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAcc   <  1:4650130/93‑1 (MQ=255)

                                                                                      ggAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGGCGATTTAcc   >  1:3736170/1‑93 (MQ=255)

                                                                                       gAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAccc  <  2:4672203/93‑1 (MQ=255)

                                                                                       gAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAccc  >  2:5964469/1‑93 (MQ=255)

                                                                                       gAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAccc  >  1:6431343/1‑93 (MQ=255)

                                                                                       gAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAccc  <  1:7400075/93‑1 (MQ=255)

                                                                                       gAATTCTCTTTCAGATCCAGCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAccc  <  1:2112478/93‑1 (MQ=255)

AAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCC  >  NC_000913/826928‑827107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`