Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 844,923 T→G intergenic (‑220/+41) ybiO ← / ← glnQ putative transport protein/ATP‑binding component of glutamine high‑affinity transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913844,9230TG99.2% 772.0 / ‑2.4 245intergenic (‑220/+41)ybiO/glnQputative transport protein/ATP‑binding component of glutamine high‑affinity transport system
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base G (119/124);  total (120/125)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01

Only 100 of 248 total aligned reads displayed.

TGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTC  >  NC_000913/844833‑845012
                                                                                          |                                                                                         
 gACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTa                                                                                        <  2:1151208/93‑1 (MQ=255)
  aCAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAg                                                                                       <  2:3307666/93‑1 (MQ=255)
    aaCGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGc                                                                                     >  1:5849829/1‑93 (MQ=255)
     aCGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGcc                                                                                    <  2:2947828/93‑1 (MQ=255)
      cGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCt                                                                                   <  1:6632992/93‑1 (MQ=255)
        tGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGa                                                                                 >  1:658034/1‑93 (MQ=255)
        tGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGa                                                                                 >  2:4168103/1‑93 (MQ=255)
         gCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGAt                                                                                >  1:4013370/1‑93 (MQ=255)
          cGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATa                                                                               <  1:5615872/93‑1 (MQ=255)
           gggCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATaa                                                                              <  1:6425059/93‑1 (MQ=255)
            ggCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAg                                                                             >  2:6051223/1‑93 (MQ=255)
            ggCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAg                                                                             >  2:3629615/1‑93 (MQ=255)
             gCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGc                                                                            >  1:1381282/1‑93 (MQ=255)
                tttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTa                                                                         >  2:6005843/1‑93 (MQ=255)
                 ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAg                                                                        >  2:3213697/1‑93 (MQ=255)
                 ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGACTGATAAGCGTAg                                                                        >  2:4577394/1‑93 (MQ=255)
                   ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAgcg                                                                      >  1:1083575/1‑93 (MQ=255)
                     gCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCa                                                                    <  2:4841229/93‑1 (MQ=255)
                      ccGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCAt                                                                   <  1:5102718/93‑1 (MQ=255)
                       cGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATc                                                                  >  2:2001318/1‑93 (MQ=255)
                       cGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATc                                                                  <  2:5812825/93‑1 (MQ=255)
                        ggATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCa                                                                 <  2:5385113/93‑1 (MQ=255)
                         gATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAg                                                                <  1:439356/93‑1 (MQ=255)
                           tGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                              >  1:7149200/1‑93 (MQ=255)
                           tGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                              <  2:659484/93‑1 (MQ=255)
                            gcggcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                             <  1:4174883/93‑1 (MQ=255)
                             cggcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                            <  2:3748591/93‑1 (MQ=255)
                             cggcgTGAACCCCTTATCCGGCCTACAAGTTCCTGCAATTTTAATAAATTGGCAGATATACGGTTGGACTGCTTAGCGTAGCGCATCGGGCaa                                                            >  2:5600939/1‑93 (MQ=12)
                              ggcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                                                           >  2:1309589/1‑93 (MQ=255)
                               gcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtg                                                          >  1:783805/1‑93 (MQ=255)
                               gcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtg                                                          <  1:5805129/93‑1 (MQ=255)
                               gcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtg                                                          <  2:7758283/93‑1 (MQ=255)
                                 gTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtgtg                                                        >  1:1015268/1‑93 (MQ=255)
                                  tGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATgtgt                                                       >  2:446355/1‑93 (MQ=255)
                                  tGAACGCCTTATCCGTCCCACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATgtgt                                                       <  1:6910491/93‑1 (MQ=255)
                                   gAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTc                                                      >  2:3520222/1‑93 (MQ=255)
                                   gAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTc                                                      <  1:2663662/93‑1 (MQ=255)
                                    aaCGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCt                                                     <  2:2058269/93‑1 (MQ=255)
                                      cGCCTTATCCGTCCTACTAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                   <  1:7034454/93‑1 (MQ=255)
                                      cGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                   <  1:6783502/93‑1 (MQ=255)
                                      cGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                   <  1:2858475/93‑1 (MQ=255)
                                       gCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttat                                                  >  2:2699662/1‑93 (MQ=255)
                                        ccTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttatt                                                 <  2:2172634/93‑1 (MQ=255)
                                         cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttatta                                                >  1:5396307/1‑93 (MQ=255)
                                           tATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAag                                              <  2:6642567/93‑1 (MQ=255)
                                            aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                             >  2:4942287/1‑93 (MQ=255)
                                            aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                             <  1:2624053/93‑1 (MQ=255)
                                            aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                             >  2:5545565/1‑93 (MQ=255)
                                            aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                             >  1:618315/1‑93 (MQ=255)
                                             tCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAagag                                            >  1:7896799/1‑93 (MQ=255)
                                             tCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAagag                                            <  1:1544825/93‑1 (MQ=255)
                                              ccGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAgaga                                           <  1:7477954/93‑1 (MQ=255)
                                              ccGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAgaga                                           <  1:572264/93‑1 (MQ=255)
                                              ccGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAgaga                                           <  2:187408/93‑1 (MQ=255)
                                                 tCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGt                                        >  2:3409342/1‑93 (MQ=255)
                                                 tCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGt                                        >  2:82367/1‑93 (MQ=255)
                                                   cTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgc                                      <  1:7793380/93‑1 (MQ=255)
                                                    tACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgct                                     >  2:4278898/1‑93 (MQ=255)
                                                     aCAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgctg                                    <  2:1730664/93‑1 (MQ=255)
                                                     aCAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgctg                                    <  1:5671845/93‑1 (MQ=255)
                                                      cAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtgctgc                                   >  2:7039381/1‑93 (MQ=255)
                                                       aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCa                                  >  1:7094724/1‑93 (MQ=255)
                                                       aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCa                                  >  1:1835314/1‑93 (MQ=255)
                                                       aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCa                                  >  2:5800397/1‑93 (MQ=255)
                                                       aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCa                                  >  2:2213276/1‑93 (MQ=255)
                                                           tCATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaaaa                              <  1:7578296/93‑1 (MQ=255)
                                                            cATGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAAt                             <  1:1131861/93‑1 (MQ=255)
                                                             aTGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGTAAAAAtt                            >  2:30814/1‑93 (MQ=255)
                                                              tGCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTc                           >  1:1744183/1‑93 (MQ=255)
                                                              agCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTc                           <  1:916623/92‑1 (MQ=255)
                                                               gCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGGAAAAATTcc                          <  2:5270114/93‑1 (MQ=255)
                                                               gCAATTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTcc                          <  1:1957266/93‑1 (MQ=255)
                                                                 aaTTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTg                        >  2:5084371/1‑93 (MQ=255)
                                                                 aaTTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTg                        >  1:3644291/1‑93 (MQ=255)
                                                                 aaTTTTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTg                        <  2:4082314/93‑1 (MQ=255)
                                                                   ttttAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCa                      <  2:764916/93‑1 (MQ=255)
                                                                   ttttAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCa                      >  1:1893400/1‑93 (MQ=255)
                                                                    tttAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCaa                     >  2:901884/1‑93 (MQ=255)
                                                                     ttAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAg                    >  2:4602761/1‑93 (MQ=255)
                                                                      taataaGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgc                   >  1:7807829/1‑93 (MQ=255)
                                                                       aataaGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgcg                  <  1:330896/93‑1 (MQ=255)
                                                                       aataaGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgcg                  >  2:5529887/1‑93 (MQ=255)
                                                                       aataaGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgcg                  >  2:1498591/1‑93 (MQ=255)
                                                                         taaGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCt                <  2:471510/93‑1 (MQ=255)
                                                                         taaGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCt                <  2:7479342/93‑1 (MQ=255)
                                                                            gTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGc             <  2:7814272/93‑1 (MQ=255)
                                                                             ttGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCt            <  2:3940098/93‑1 (MQ=255)
                                                                              tGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTc           <  2:6173783/93‑1 (MQ=255)
                                                                              tGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTc           <  1:5160881/93‑1 (MQ=255)
                                                                               gCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcg          >  1:2262706/1‑93 (MQ=255)
                                                                                ccAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcgg         <  1:530407/93‑1 (MQ=255)
                                                                                ccAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcgg         <  1:4949479/93‑1 (MQ=255)
                                                                                   gATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcggcgg      <  1:720566/93‑1 (MQ=255)
                                                                                   gATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcggcgg      >  2:6426845/1‑93 (MQ=255)
                                                                                   gATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcggcgg      <  1:4721594/93‑1 (MQ=255)
                                                                                    atatCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg     >  2:6841690/1‑93 (MQ=255)
                                                                                    atatCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg     <  2:1026708/93‑1 (MQ=255)
                                                                                      atCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGtt   >  1:3370423/1‑93 (MQ=255)
                                                                                      atCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGtt   <  1:854934/93‑1 (MQ=255)
                                                                                       tCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTc  >  2:1363394/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTC  >  NC_000913/844833‑845012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: