BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	888,315	C→T	G243D (GGC→GAC)	b0847 ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	888,315	0	C	T	100.0%	927.9 / NA	260	G243D (GGC→GAC)	b0847	putative transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (135/125); total (135/125)

Only 100 of 271 total aligned reads displayed.

CTACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888223‑888404

   ccAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCgg                                                                                        >  1:5650789/1‑93 (MQ=255)

   ccAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCgg                                                                                        <  1:1622145/93‑1 (MQ=255)

    cAACGCTATTTCATCGCCGATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGt                                                                                       >  2:7744769/1‑93 (MQ=255)

    cAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGt                                                                                       >  1:3189457/1‑93 (MQ=255)

     caCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGtt                                                                                      <  1:1524935/92‑1 (MQ=255)

     aaCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGtt                                                                                      <  1:3000170/93‑1 (MQ=255)

     aaCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGtt                                                                                      <  1:6329930/93‑1 (MQ=255)

        gCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGt                                                                                   <  2:1044510/93‑1 (MQ=255)

        gCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGt                                                                                   >  2:4268316/1‑93 (MQ=255)

        gCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGt                                                                                   <  2:7825459/93‑1 (MQ=255)

         cTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTc                                                                                  <  2:4871824/93‑1 (MQ=255)

         cTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTc                                                                                  >  2:3771736/1‑93 (MQ=255)

          tATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCg                                                                                 >  2:5193148/1‑93 (MQ=255)

          tATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCg                                                                                 >  2:3454681/1‑93 (MQ=255)

           aTTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGa                                                                                >  2:1915882/1‑93 (MQ=255)

           aTTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGa                                                                                >  1:2343415/1‑93 (MQ=255)

            tttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               <  1:3947300/93‑1 (MQ=255)

              tCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaa                                                                             <  2:1681729/93‑1 (MQ=255)

              tCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaa                                                                             <  1:4087033/93‑1 (MQ=255)

               cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            <  1:7288721/93‑1 (MQ=255)

               cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            <  2:4101488/93‑1 (MQ=255)

               cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            <  2:4827919/93‑1 (MQ=255)

               cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            >  2:4302400/1‑93 (MQ=255)

                     ccATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCa                                                                      >  2:5434816/1‑93 (MQ=255)

                       aTTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    <  1:835943/93‑1 (MQ=255)

                       aTTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    <  2:910265/93‑1 (MQ=255)

                       aTTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    <  1:1684238/93‑1 (MQ=255)

                       aTTTGTAGCACGGCATAACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    <  1:7026284/93‑1 (MQ=255)

                          tGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCa                                                                 <  2:4726774/93‑1 (MQ=255)

                           gTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCAc                                                                <  2:2103810/93‑1 (MQ=255)

                            tAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACg                                                               <  2:6805642/93‑1 (MQ=255)

                              gCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCa                                                             <  2:757159/93‑1 (MQ=255)

                              gCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCa                                                             >  2:3175870/1‑93 (MQ=255)

                                aCGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGa                                                           <  2:5329038/93‑1 (MQ=255)

                                 cGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAt                                                          >  1:4753130/1‑93 (MQ=255)

                                 cGGCATCACCGTCTGGATTTGCAAGAATCCCGTTACGTCGAATAAGTTCAATGTAGCAGTCGGTTTGTCGATAAATAACCAGTTCATGCAGAt                                                          >  1:4980578/1‑93 (MQ=255)

                                  ggCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtt                                                         <  2:3307109/93‑1 (MQ=255)

                                   gCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttt                                                        >  1:2804382/1‑93 (MQ=255)

                                   gCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttt                                                        >  2:3496175/1‑93 (MQ=255)

                                     aTCACCGTCTGGATTTGCCTGAATCCCGTTACGTCGAATGCGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGattatt                                                      <  2:7043166/93‑1 (MQ=255)

                                     aTCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttttt                                                      >  1:3708697/1‑93 (MQ=255)

                                     aTCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttttt                                                      >  2:1535152/1‑93 (MQ=255)

                                     aTCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttttt                                                      >  1:4850375/1‑93 (MQ=255)

                                      tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  2:2641615/1‑93 (MQ=255)

                                      tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:762229/1‑93 (MQ=255)

                                      tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     <  1:7569429/93‑1 (MQ=255)

                                      tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:6698533/1‑93 (MQ=255)

                                      tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:4494444/1‑93 (MQ=255)

                                      tCACCGTCTGGATTTGACAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  2:7508954/1‑93 (MQ=255)

                                        aCCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGcc                                                   <  2:2435988/93‑1 (MQ=255)

                                        aCCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGcc                                                   <  1:5625947/93‑1 (MQ=255)

                                         ccGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCg                                                  >  1:876715/1‑93 (MQ=255)

                                            tCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               >  2:7628683/1‑93 (MQ=255)

                                            tCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               <  1:2361076/93‑1 (MQ=255)

                                            tCTGGATTTGCCAGAATCCCGGTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               <  1:6847972/93‑1 (MQ=255)

                                             cTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCgg                                              <  1:1213017/93‑1 (MQ=255)

                                             cTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCgg                                              <  1:1417382/93‑1 (MQ=255)

                                             cTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCgg                                              <  1:2095463/93‑1 (MQ=255)

                                             cTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCgg                                              <  2:5060103/93‑1 (MQ=255)

                                              tGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGt                                             >  1:6368369/1‑93 (MQ=255)

                                               ggATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTc                                            >  2:1247988/1‑93 (MQ=255)

                                               ggATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTc                                            >  2:494057/1‑93 (MQ=255)

                                                gATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTcc                                           >  2:7784273/1‑93 (MQ=255)

                                                 aTTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCa                                          <  2:1267797/93‑1 (MQ=255)

                                                  tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         >  2:5261856/1‑93 (MQ=255)

                                                  tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         <  2:5087340/93‑1 (MQ=255)

                                                       cAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccac                                    >  1:246250/1‑93 (MQ=255)

                                                       cAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccac                                    >  1:2682105/1‑93 (MQ=255)

                                                        aGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacc                                   <  1:5885117/93‑1 (MQ=255)

                                                         gAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacca                                  >  1:6302975/1‑93 (MQ=255)

                                                         gAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacca                                  >  2:6331131/1‑93 (MQ=255)

                                                            tCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGtt                               >  1:7781288/1‑93 (MQ=255)

                                                            tCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGtt                               >  2:6142745/1‑93 (MQ=255)

                                                              ccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTcc                             <  2:2902622/93‑1 (MQ=255)

                                                                gTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           <  2:694796/93‑1 (MQ=255)

                                                                gTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           >  1:6622069/1‑93 (MQ=255)

                                                                 ttACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCggg                          <  1:5783005/93‑1 (MQ=255)

                                                                     gTCGAATACTTGCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGa                      <  2:740596/93‑1 (MQ=255)

                                                                      tCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAc                     <  1:3263359/93‑1 (MQ=255)

                                                                        gAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAcgc                   >  1:5019595/1‑93 (MQ=255)

                                                                          aTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGTCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGa                 >  1:105829/1‑93 (MQ=255)

                                                                          aTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGa                 <  1:1787616/93‑1 (MQ=255)

                                                                          aTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGa                 <  1:352505/93‑1 (MQ=255)

                                                                           tACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGAt                <  1:5253109/93‑1 (MQ=255)

                                                                            aCGTTCAATGTAGCAGTCGGTTTGTCGTTAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATa               >  1:5854262/1‑93 (MQ=255)

                                                                            aCGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATa               <  1:7214290/93‑1 (MQ=255)

                                                                             cGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAg              <  2:5752085/93‑1 (MQ=255)

                                                                             cGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAg              <  2:1883502/93‑1 (MQ=255)

                                                                              gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             <  2:4454511/93‑1 (MQ=255)

                                                                              gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             <  1:5569112/93‑1 (MQ=255)

                                                                               ttCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgc            >  1:426094/1‑93 (MQ=255)

                                                                               ttCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgc            >  1:4605374/1‑93 (MQ=255)

                                                                               ttCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgc            >  2:2357178/1‑93 (MQ=255)

                                                                                tCAATGTAGGAGTCGTTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGCCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcg           <  2:106227/93‑1 (MQ=255)

                                                                                tCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGACGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcg           <  2:2164622/93‑1 (MQ=255)

                                                                                    tGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGa       >  2:7212937/1‑93 (MQ=255)

                                                                                    tGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGa       >  2:3002881/1‑93 (MQ=255)

                                                                                      tAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATc     >  1:3811606/1‑93 (MQ=255)

                                                                                      tAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATc     <  1:5094707/93‑1 (MQ=255)

                                                                                        gcagtCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCAc   <  1:6769193/93‑1 (MQ=255)

CTACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888223‑888404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`