Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 891,325 T→C S46P (TCT→CCT)  rimK → ribosomal protein S6 modification protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913891,3250TC99.5% 653.1 / ‑5.2 211S46P (TCT→CCT) rimKribosomal protein S6 modification protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (106/104);  total (106/105)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01

Only 100 of 226 total aligned reads displayed.

AAGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGC  >  NC_000913/891235‑891413
                                                                                          |                                                                                        
aaGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGcct                                                                                        <  1:1537310/93‑1 (MQ=255)
aaGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGcct                                                                                        <  1:7191172/93‑1 (MQ=255)
  gCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGccttc                                                                                      >  1:1730841/1‑93 (MQ=255)
   cGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGccttct                                                                                     >  1:4101256/1‑93 (MQ=255)
    ggCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTa                                                                                    >  1:5037222/1‑93 (MQ=255)
    ggCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTa                                                                                    >  1:596203/1‑93 (MQ=255)
     gCTGCGTTAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTACGGCGCCTTCTAt                                                                                   <  2:6267816/93‑1 (MQ=255)
     gCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAt                                                                                   >  1:3915436/1‑93 (MQ=255)
     gCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAt                                                                                   <  2:7575893/93‑1 (MQ=255)
     gCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAt                                                                                   <  2:5470977/93‑1 (MQ=255)
     gCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAt                                                                                   <  1:705400/93‑1 (MQ=255)
     gCTGCGTGAACCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAt                                                                                   <  2:7152925/93‑1 (MQ=255)
      cTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTAtt                                                                                  <  1:4412854/93‑1 (MQ=255)
       tGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTc                                                                                 <  2:4910966/93‑1 (MQ=255)
        gCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCa                                                                                <  2:395436/93‑1 (MQ=255)
        gCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCa                                                                                >  1:5670027/1‑93 (MQ=255)
        gCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCa                                                                                <  2:6263882/93‑1 (MQ=255)
        gCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCa                                                                                <  1:1884871/93‑1 (MQ=255)
          gTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACt                                                                              >  1:1259981/1‑93 (MQ=255)
           tGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTa                                                                             >  1:6768183/1‑93 (MQ=255)
             aaGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACa                                                                           >  2:920466/1‑93 (MQ=255)
               gCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACaaa                                                                         <  1:2904501/93‑1 (MQ=255)
                ccGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAg                                                                        >  2:2163633/1‑93 (MQ=255)
                ccGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAg                                                                        <  1:1099781/93‑1 (MQ=255)
                ccGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAg                                                                        <  1:2071436/93‑1 (MQ=255)
                  gCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGc                                                                      <  1:5166649/93‑1 (MQ=255)
                      taCAGCGCGGTCACCTGGTTGAAATTCTTGTTCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCa                                                                  >  2:43786/1‑93 (MQ=255)
                       aCAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCaa                                                                 <  1:3354270/93‑1 (MQ=255)
                        cAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAg                                                                <  2:5929404/93‑1 (MQ=255)
                         aGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGt                                                               >  2:7293095/1‑93 (MQ=255)
                            gcgGTCCCCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTAc                                                            <  2:2771677/93‑1 (MQ=255)
                            gcgGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTAc                                                            <  2:3304968/93‑1 (MQ=255)
                            gcgGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAAGCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTAc                                                            <  1:5717575/93‑1 (MQ=255)
                              ggTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTAccc                                                          >  1:5069622/1‑93 (MQ=255)
                                tCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCa                                                        <  1:945535/93‑1 (MQ=255)
                                tCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCa                                                        >  2:2447521/1‑93 (MQ=255)
                                  aCCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCAtt                                                      >  1:3594881/1‑93 (MQ=255)
                                  aCCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCAtt                                                      <  1:182193/93‑1 (MQ=255)
                                    cTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCAtttt                                                    <  2:5428152/93‑1 (MQ=255)
                                    cTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCAtttt                                                    >  1:4837817/1‑93 (MQ=255)
                                     tGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTg                                                   <  2:7701729/93‑1 (MQ=255)
                                      ggTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGa                                                  >  1:3395537/1‑93 (MQ=255)
                                      ggTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGa                                                  >  2:5132209/1‑93 (MQ=255)
                                       gTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGAc                                                 <  2:4125702/93‑1 (MQ=255)
                                       gTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGAc                                                 >  1:4190445/1‑93 (MQ=255)
                                        ttGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACg                                                >  1:3677910/1‑93 (MQ=255)
                                          gAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCa                                              >  2:822671/1‑93 (MQ=255)
                                          gAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCa                                              <  2:1340200/93‑1 (MQ=255)
                                          gAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCa                                              >  1:7551598/1‑93 (MQ=255)
                                           aaaTTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAg                                             <  2:2001434/93‑1 (MQ=255)
                                             aTTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTg                                           >  1:1037529/1‑93 (MQ=255)
                                              ttCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGa                                          >  1:3426175/1‑93 (MQ=255)
                                              ttCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGa                                          >  1:6825006/1‑93 (MQ=255)
                                               tCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGAt                                         >  2:5036234/1‑93 (MQ=255)
                                               tCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGAt                                         <  1:6287020/93‑1 (MQ=255)
                                                 ttGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATcc                                       >  1:251435/1‑93 (MQ=255)
                                                  tGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTCCAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATccc                                      >  2:1870807/1‑93 (MQ=255)
                                                  tGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGTCCGCAAGTTACCCCATTTTGACGCAGTGATccc                                      <  1:4003322/93‑1 (MQ=255)
                                                  tGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATccc                                      <  2:1242988/93‑1 (MQ=255)
                                                   gATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCcg                                     >  1:2181195/1‑93 (MQ=255)
                                                     tCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCcgcg                                   >  1:2369538/1‑93 (MQ=255)
                                                     tCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCcgcg                                   >  2:7487407/1‑93 (MQ=255)
                                                     tCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCcgcg                                   >  2:550726/1‑93 (MQ=255)
                                                        gCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTAt                                <  2:29961/93‑1 (MQ=255)
                                                        gCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTAt                                <  2:6751473/93‑1 (MQ=255)
                                                        gCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTAt                                >  1:3371988/1‑93 (MQ=255)
                                                        gCTTTCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTAt                                >  2:2099311/1‑93 (MQ=255)
                                                         ctgtCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTAtt                               <  1:1674730/90‑1 (MQ=255)
                                                          tttCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTg                              >  1:863926/1‑93 (MQ=255)
                                                           ttCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTgg                             >  1:3053002/1‑93 (MQ=255)
                                                           ttCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTgg                             <  1:1429149/93‑1 (MQ=255)
                                                           ttCTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTgg                             >  1:6191581/1‑93 (MQ=255)
                                                             cTTGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCa                           <  2:2906676/93‑1 (MQ=255)
                                                              ttGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCAc                          >  1:4290359/1‑93 (MQ=255)
                                                               tGCTACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCAcc                         >  1:834331/1‑93 (MQ=255)
                                                                  tACATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGcc                      >  2:1520091/1‑93 (MQ=255)
                                                                    cATGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCAt                    >  1:5382541/1‑93 (MQ=255)
                                                                     aTGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCAtt                   >  1:6476952/1‑93 (MQ=255)
                                                                     aTGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCAtt                   >  2:3126858/1‑93 (MQ=255)
                                                                      tGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTa                  <  2:2282721/93‑1 (MQ=255)
                                                                      tGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTa                  <  1:4519065/93‑1 (MQ=255)
                                                                      tGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTa                  >  2:5277235/1‑93 (MQ=255)
                                                                      tGAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTa                  >  2:1485194/1‑93 (MQ=255)
                                                                       gAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTAc                 >  2:3042958/1‑93 (MQ=255)
                                                                       gAACATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTAc                 >  2:6822899/1‑93 (MQ=255)
                                                                         aCATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGACATTAACt               >  2:678890/1‑93 (MQ=255)
                                                                          cATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCtt              >  1:7853517/1‑93 (MQ=255)
                                                                          cATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCtt              <  1:5315517/93‑1 (MQ=255)
                                                                          cATAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCtt              <  2:3622458/93‑1 (MQ=255)
                                                                            tAAATCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTAATCCCGCGTATTGGCACCGCCATTACCtttt            <  2:649015/93‑1 (MQ=255)
                                                                              aaTCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTAt          <  2:5603969/93‑1 (MQ=255)
                                                                               aTCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATg         >  2:5762484/1‑93 (MQ=255)
                                                                                tCCTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATgg        >  2:5967381/1‑93 (MQ=255)
                                                                                 ccTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATggg       <  2:6031663/93‑1 (MQ=255)
                                                                                  cTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGa      <  1:467446/93‑1 (MQ=255)
                                                                                  cTGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGa      >  2:3800277/1‑93 (MQ=255)
                                                                                   tGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGAc     <  1:6141509/93‑1 (MQ=255)
                                                                                   tGCGGCGCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTGGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGAc     <  1:2497585/93‑1 (MQ=255)
                                                                                   cggggcgCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGAc     <  1:5509589/90‑1 (MQ=255)
                                                                                    gcggcgCCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGAcg    >  1:6626586/1‑93 (MQ=255)
                                                                                          |                                                                                        
AAGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGC  >  NC_000913/891235‑891413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: