BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	922,398	T→C	V88A (GTG→GCG)	yljA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	922,398	0	T	C	99.6%	764.4 / ‑5.0	240	V88A (GTG→GCG)	yljA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (119/120); total (119/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01

Only 100 of 246 total aligned reads displayed.

AACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTAT  >  NC_000913/922309‑922488

aaCGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGaa                                                                                         <  1:4473287/93‑1 (MQ=255)

 aCGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAAc                                                                                        >  1:2207777/1‑93 (MQ=255)

 aCGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAAc                                                                                        <  2:6487440/93‑1 (MQ=255)

   gCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACaa                                                                                      <  2:618627/93‑1 (MQ=255)

    cAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAg                                                                                     <  2:7911266/93‑1 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                   <  1:1058132/93‑1 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                   <  2:7538939/93‑1 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                   >  1:4773386/1‑93 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                   <  2:6884747/93‑1 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGGTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                   >  2:1718725/1‑93 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                  <  1:5684532/93‑1 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                  <  1:3896657/93‑1 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                  <  2:7702110/93‑1 (MQ=255)

        tGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcg                                                                                 <  1:1638443/93‑1 (MQ=255)

          aTGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcgcg                                                                               >  2:3124511/1‑93 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                              >  1:1841941/1‑93 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                              <  2:4576925/93‑1 (MQ=255)

            gCTTGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                             >  2:1226367/1‑93 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                             <  2:2005903/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                             <  1:6162213/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                             <  1:3574327/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                             <  1:7142717/93‑1 (MQ=255)

              tCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAggg                                                                           <  1:2256364/93‑1 (MQ=255)

              tCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAggg                                                                           >  2:523269/1‑93 (MQ=255)

                gCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGgag                                                                         >  1:7572809/1‑93 (MQ=255)

                  tGTTCCCTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                       <  1:542700/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                       <  1:4342662/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                       >  2:1153162/1‑93 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                       <  1:113600/93‑1 (MQ=255)

                   gTTCACTACCAGGGGAAGGCCAGTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAAt                                                                      <  1:4269462/93‑1 (MQ=255)

                    ttCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATg                                                                     >  2:7429168/1‑93 (MQ=255)

                    ttCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATg                                                                     >  2:856848/1‑93 (MQ=255)

                      cACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAg                                                                   <  2:6278641/93‑1 (MQ=255)

                      cACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAg                                                                   >  1:1877546/1‑93 (MQ=255)

                      cACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAg                                                                   <  2:4449573/93‑1 (MQ=255)

                        cTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCa                                                                 <  1:6658511/93‑1 (MQ=255)

                        cTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCa                                                                 <  1:4630989/93‑1 (MQ=255)

                         tACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCAt                                                                >  2:1450333/1‑93 (MQ=255)

                          aCCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATc                                                               <  2:3441666/93‑1 (MQ=255)

                          aCCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATc                                                               <  2:2751240/93‑1 (MQ=255)

                           ccAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATcc                                                              >  2:3030067/1‑93 (MQ=255)

                             aGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAt                                                            >  1:4889614/1‑93 (MQ=255)

                             aGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAt                                                            <  1:551409/93‑1 (MQ=255)

                             aGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAt                                                            <  1:7831144/93‑1 (MQ=255)

                              ggggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAtt                                                           <  2:6704470/93‑1 (MQ=255)

                               gggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTg                                                          >  1:6747652/1‑93 (MQ=255)

                                 gAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCt                                                        >  2:5940504/1‑93 (MQ=255)

                                   aGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCtgt                                                      >  2:2449490/1‑93 (MQ=255)

                                    ggCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCtgtg                                                     >  1:6573821/1‑93 (MQ=255)

                                      ccATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTa                                                   >  2:2957642/1‑93 (MQ=255)

                                      ccATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTa                                                   <  2:4965488/93‑1 (MQ=255)

                                       cATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTAc                                                  <  2:7670652/93‑1 (MQ=255)

                                          ttGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCt                                               >  2:154023/1‑93 (MQ=255)

                                           tGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTa                                              <  2:1876414/93‑1 (MQ=255)

                                           tGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTa                                              <  2:4623099/93‑1 (MQ=255)

                                            gCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAg                                             <  2:2222122/93‑1 (MQ=255)

                                             cGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGa                                            <  1:2858689/93‑1 (MQ=255)

                                              ggAGTCTTTACCGCCGAGGTTGAAGAAACCAAAGTGGCGATGGCGAAAAAGTCCGCGAGGGAGAATGAGAATCCATTGCTGTGAACGCTaaaa                                           >  2:2342824/1‑93 (MQ=255)

                                               gAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGaaa                                          >  2:3563554/1‑93 (MQ=255)

                                                  tCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAg                                       >  2:5155537/1‑93 (MQ=255)

                                                  tCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAg                                       >  1:1913411/1‑93 (MQ=255)

                                                  tCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAg                                       >  2:679339/1‑93 (MQ=255)

                                                   cTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGc                                      <  1:4208435/93‑1 (MQ=255)

                                                    tttACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGcc                                     <  2:4665971/93‑1 (MQ=255)

                                                    tttACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGcc                                     >  1:2768342/1‑93 (MQ=255)

                                                       aCCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGa                                  >  1:935414/1‑93 (MQ=255)

                                                        ccgccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGaa                                 <  1:5122970/93‑1 (MQ=255)

                                                        ccgccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGaa                                 <  1:1509690/93‑1 (MQ=255)

                                                         cgccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAAt                                >  1:7853486/1‑93 (MQ=255)

                                                           ccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGc                              <  2:3905181/93‑1 (MQ=255)

                                                            cgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCa                             <  2:7357010/93‑1 (MQ=255)

                                                             gAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAg                            >  2:2500903/1‑93 (MQ=255)

                                                              aGGTTGCAGAAACTAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAgg                           >  1:1379170/1‑93 (MQ=255)

                                                              aGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAgg                           >  1:4028140/1‑93 (MQ=255)

                                                               ggTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGc                          >  2:2613743/1‑93 (MQ=255)

                                                                gTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCa                         >  2:2278039/1‑93 (MQ=255)

                                                                gTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCa                         >  2:7092687/1‑93 (MQ=255)

                                                                gTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCa                         >  1:5961737/1‑93 (MQ=255)

                                                                   gCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaa                      >  2:4752103/1‑93 (MQ=255)

                                                                     aGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaa                    <  1:2978627/93‑1 (MQ=255)

                                                                     aGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaa                    >  1:2050503/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  2:7597521/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  1:2684136/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  1:1240048/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  1:6009015/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  2:6747359/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  2:6561583/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                   >  1:2524768/1‑93 (MQ=255)

                                                                       aaaCCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAAt                  >  2:5486865/1‑93 (MQ=255)

                                                                             atgTGGCGATGGCGAACTAGTACGCGTGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCAGTAAAATTggggg            >  2:7048443/3‑93 (MQ=255)

                                                                             aaGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTggggg            <  1:2431885/93‑1 (MQ=255)

                                                                               gTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAg          <  1:1817722/93‑1 (MQ=255)

                                                                                tggcgatggcgaACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAgg         >  1:1730821/1‑93 (MQ=255)

                                                                                  gCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTg       <  1:6901806/93‑1 (MQ=255)

                                                                                  gCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTg       >  1:7478735/1‑93 (MQ=255)

                                                                                  gCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTg       <  1:322935/93‑1 (MQ=255)

                                                                                      tGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGGGGTGCCtt   >  1:5717181/1‑92 (MQ=255)

                                                                                      tGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTa   >  1:7672646/1‑93 (MQ=255)

                                                                                      tGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTa   <  2:5688885/93‑1 (MQ=255)

                                                                                      tGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTa   >  1:5169254/1‑93 (MQ=255)

AACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTAT  >  NC_000913/922309‑922488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`