BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	968,384	T→C	S266P (TCT→CCT)	ycaH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	968,384	0	T	C	100.0%	696.4 / NA	217	S266P (TCT→CCT)	ycaH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/121); total (96/121)

Only 100 of 224 total aligned reads displayed.

GCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTT  >  NC_000913/968294‑968473

gCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCt                                                                                         <  2:4980347/93‑1 (MQ=255)

  ggggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCttt                                                                                       <  2:7227292/93‑1 (MQ=255)

   gggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTg                                                                                      <  2:2629571/93‑1 (MQ=255)

    ggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGa                                                                                     <  2:5144494/93‑1 (MQ=255)

     gATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGATAAATGTGTACCTCTGGCCGATCATCAGCCTTTTaa                                                                                    >  2:7274794/1‑93 (MQ=255)

     gATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGaa                                                                                    >  1:1891435/1‑93 (MQ=255)

     gATTCGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGaa                                                                                    >  2:6331124/1‑93 (MQ=255)

       ttGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAAcc                                                                                  <  1:1133567/93‑1 (MQ=255)

        tGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCa                                                                                 >  2:3379866/1‑93 (MQ=255)

        tGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCa                                                                                 <  1:4394559/93‑1 (MQ=255)

           gCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGc                                                                              <  1:7459182/93‑1 (MQ=255)

           gCATCCGCCGCGCTTTTCTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGc                                                                              <  1:1228807/93‑1 (MQ=255)

            cATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCg                                                                             >  1:3712426/1‑93 (MQ=255)

             aTCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCgg                                                                            >  1:5415261/1‑93 (MQ=255)

             aTCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCgg                                                                            >  2:1160192/1‑93 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           >  1:6888193/1‑93 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           >  1:1090163/1‑93 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           <  2:2892395/93‑1 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           <  2:52402/93‑1 (MQ=255)

                cgccgcGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATg                                                                         <  2:3040586/93‑1 (MQ=255)

                cgccgcGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATg                                                                         <  1:6549152/93‑1 (MQ=255)

                  ccgcGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTc                                                                       <  2:5982330/93‑1 (MQ=255)

                   cgcgCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCa                                                                      >  2:2843067/1‑93 (MQ=255)

                   cgcgCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCa                                                                      >  1:5753380/1‑93 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     <  2:3530020/93‑1 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     <  2:3961326/93‑1 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     <  2:4035249/93‑1 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     <  1:6620771/93‑1 (MQ=255)

                     cgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGt                                                                    >  2:8642/1‑93 (MQ=255)

                        ttttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCg                                                                 >  1:4546300/1‑93 (MQ=255)

                         tttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGACCCATGCGGATGTCAGTGCGt                                                                <  2:2260792/93‑1 (MQ=255)

                         tttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGt                                                                >  1:2520231/1‑93 (MQ=255)

                          ttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGtt                                                               <  1:5949175/93‑1 (MQ=255)

                          ttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGtt                                                               <  1:246108/93‑1 (MQ=255)

                          ttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGtt                                                               <  2:3142880/93‑1 (MQ=255)

                           tttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTg                                                              <  1:1467517/93‑1 (MQ=255)

                              tccACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGACCCATGCGGATGTCAGAGCGTTGGTa                                                           <  2:2202751/92‑1 (MQ=255)

                              gCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTa                                                           >  2:4883360/1‑93 (MQ=255)

                                 aCGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAgc                                                        <  2:5795269/93‑1 (MQ=255)

                                  cGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGACCCATGCGGATGTCAGTGCGTTGGTAAgcg                                                       >  1:6472332/1‑93 (MQ=255)

                                    cTGATGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGcc                                                     <  2:7344734/93‑1 (MQ=255)

                                    cTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAgcgcg                                                     >  1:6794591/1‑92 (MQ=255)

                                    cTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGcc                                                     >  2:2025951/1‑93 (MQ=255)

                                    cTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGcc                                                     <  2:1034658/93‑1 (MQ=255)

                                     tGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCg                                                    >  1:3027749/1‑93 (MQ=255)

                                         gATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCa                                                >  1:46922/1‑93 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              <  1:3833502/93‑1 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              <  1:3327784/93‑1 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              <  2:6122327/93‑1 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              <  2:7748901/93‑1 (MQ=255)

                                             tgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACg                                            >  1:2617113/1‑93 (MQ=255)

                                             tgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACg                                            <  1:4969587/93‑1 (MQ=255)

                                             tgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACg                                            >  2:1980092/1‑93 (MQ=255)

                                               tgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGTACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCt                                          >  1:3137020/1‑93 (MQ=255)

                                                     aCAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAAt                                    >  2:2546369/1‑93 (MQ=255)

                                                       aaCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGa                                  >  2:1842828/1‑93 (MQ=255)

                                                       aaCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGa                                  >  1:5387151/1‑93 (MQ=255)

                                                       aaCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGa                                  >  1:7508100/1‑93 (MQ=255)

                                                       aaCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGa                                  >  2:313396/1‑93 (MQ=255)

                                                        aCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGAc                                 <  1:1056480/93‑1 (MQ=255)

                                                        aCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGAc                                 >  2:5569540/1‑93 (MQ=255)

                                                        aCCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGAGCCGCGCAAACGCTGGTAATGAc                                 >  1:4032578/1‑93 (MQ=255)

                                                         ccGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACt                                <  1:3558864/93‑1 (MQ=255)

                                                           ggAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGa                              <  2:1826505/93‑1 (MQ=255)

                                                            gAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaa                             >  2:1557848/1‑93 (MQ=255)

                                                            gAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaa                             >  2:2581917/1‑93 (MQ=255)

                                                            gAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaa                             <  2:4434516/93‑1 (MQ=255)

                                                              aaaaTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaaaa                           >  2:2912082/1‑93 (MQ=255)

                                                              aaaaTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaaaa                           >  2:2536671/1‑93 (MQ=255)

                                                                 aTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGa                        >  2:4156573/1‑93 (MQ=255)

                                                                 aTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGa                        <  2:7820690/93‑1 (MQ=255)

                                                                 aTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGa                        <  2:4473555/93‑1 (MQ=255)

                                                                  tgtgTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGAt                       >  2:4094535/1‑93 (MQ=255)

                                                                  tgtgTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGAt                       >  1:3219611/1‑93 (MQ=255)

                                                                   gtgtACCTCTGGTTTATCATCAGCCTGTGAACCATGTGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATg                      <  1:2806032/93‑1 (MQ=255)

                                                                   gtgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATg                      <  2:4943974/93‑1 (MQ=255)

                                                                   gtgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATg                      <  2:7633199/93‑1 (MQ=255)

                                                                   gtgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATg                      >  1:5785663/1‑93 (MQ=255)

                                                                   gtgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATg                      <  1:2287297/93‑1 (MQ=255)

                                                                    tgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGc                     <  1:4908521/93‑1 (MQ=255)

                                                                     gtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCg                    >  1:3486641/1‑93 (MQ=255)

                                                                      tACTGCTGTCCGATCATCAGCCTTCGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGGAAAAGATGCgg                   <  2:5393304/93‑1 (MQ=255)

                                                                      tACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCgg                   >  2:6805920/1‑93 (MQ=255)

                                                                        ccGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTg                 >  2:5963120/1‑93 (MQ=255)

                                                                        ccGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTg                 >  1:6293216/1‑93 (MQ=255)

                                                                          gCTGGCCGATCATCAGCCTTTGACCCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGaa               <  2:4286138/93‑1 (MQ=255)

                                                                          gCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGaa               <  2:7057503/93‑1 (MQ=255)

                                                                            tGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAAt             >  1:7904181/1‑93 (MQ=255)

                                                                            tGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAAt             <  1:6836087/93‑1 (MQ=255)

                                                                              gCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGc           <  1:3383089/93‑1 (MQ=255)

                                                                               ccGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGcc          <  1:7086959/93‑1 (MQ=255)

                                                                                cGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGTTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCg         <  2:5526359/93‑1 (MQ=255)

                                                                                cGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCg         <  2:5463587/93‑1 (MQ=255)

                                                                                 gATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCgg        >  2:6053464/1‑93 (MQ=255)

                                                                                   tcatcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGc      >  2:6501770/1‑93 (MQ=255)

                                                                                    catcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGcc     >  1:7362855/1‑93 (MQ=255)

                                                                                    catcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGcc     <  2:4590987/93‑1 (MQ=255)

                                                                                    catcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGcc     >  1:6721470/1‑93 (MQ=255)

                                                                                     atcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCt    <  1:2039264/93‑1 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   <  1:1906715/93‑1 (MQ=255)

GCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTT  >  NC_000913/968294‑968473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`