BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	979,388	T→C	R1280R (CGT→CGC)	mukB →	MukB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	979,388	0	T	C	100.0%	727.4 / NA	231	R1280R (CGT→CGC)	mukB	MukB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (104/127); total (104/127)

Only 100 of 251 total aligned reads displayed.

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

cgAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGa                                                                                         >  2:1412647/1‑93 (MQ=255)

 gAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaa                                                                                        >  1:6180092/1‑93 (MQ=255)

 gAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaa                                                                                        >  2:7486718/1‑93 (MQ=255)

     aGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgc                                                                                    <  2:2946171/93‑1 (MQ=255)

      gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTTAACGTGAACGTGCGCGAAacgca                                                                                   >  2:4337981/1‑93 (MQ=255)

      gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgca                                                                                   >  2:645160/1‑93 (MQ=255)

       aaCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcac                                                                                  <  1:2249464/93‑1 (MQ=255)

        aCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacg                                                                                 >  1:5459576/1‑93 (MQ=255)

        aCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacg                                                                                 >  2:5162870/1‑93 (MQ=255)

         ccgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGGCAGGTGAACAGCGTGCGTCTCAACATGAACGTGCGCGAAacacacgc                                                                                >  1:1632488/1‑93 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              <  2:6375684/93‑1 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              >  2:3252496/1‑93 (MQ=255)

            tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             <  2:6621209/93‑1 (MQ=255)

            tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             >  1:4132186/1‑93 (MQ=255)

             atccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATg                                                                            <  2:348313/93‑1 (MQ=255)

              tccgtatGCTCAACCAGGGGTTGCAGTACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGc                                                                           >  1:7057885/1‑93 (MQ=255)

              tccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGc                                                                           <  1:379098/93‑1 (MQ=255)

              tccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGc                                                                           >  2:1035763/1‑93 (MQ=255)

                cgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTa                                                                         >  2:2654270/1‑93 (MQ=255)

                 gtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCCTGCTAc                                                                        >  2:5730275/1‑93 (MQ=255)

                  tatGCTCAACCAGGGGTTACAGAACGTATCGTTTGGGCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCCCGCCATGCTACt                                                                       >  2:7745848/1‑93 (MQ=255)

                    tGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTgg                                                                     >  1:6934441/1‑93 (MQ=255)

                     tcTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGa                                                                    <  1:5179100/92‑1 (MQ=255)

                     gCTTAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGa                                                                    <  2:5887378/93‑1 (MQ=255)

                     gCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGa                                                                    <  1:2890072/93‑1 (MQ=255)

                       tCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtg                                                                  >  1:6324503/1‑93 (MQ=255)

                        cAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtgt                                                                 <  2:2221512/93‑1 (MQ=255)

                          aCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGc                                                               <  1:1807714/93‑1 (MQ=255)

                           ccAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGct                                                              >  2:5969534/1‑93 (MQ=255)

                              ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           <  2:1553156/93‑1 (MQ=255)

                                ggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCTAAACGCACGCCATGCTACTGGATGTGCTCTCTg                                                         >  1:4674073/1‑93 (MQ=255)

                                  ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       >  1:1230645/1‑93 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  1:3577699/93‑1 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  2:4261166/93‑1 (MQ=255)

                                    tcAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     <  1:1075678/92‑1 (MQ=255)

                                    gCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     >  2:505863/1‑93 (MQ=255)

                                     cAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAg                                                    >  1:6898865/1‑93 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   >  1:7538820/1‑93 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   >  2:3026352/1‑93 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   >  2:3297786/1‑93 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  >  2:376600/1‑93 (MQ=255)

                                         aCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACg                                                <  2:1755304/93‑1 (MQ=255)

                                         aCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACg                                                <  1:6780794/93‑1 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              >  1:3343043/1‑93 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAAAAGCGTGCGTCTCAACGCGCACGTGCGCGAAACGCACGCCATGCTGCTGGATGTGCTCCCTGAACAGCACGag                                              >  2:1857191/1‑93 (MQ=255)

                                           gTATCGTGTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              <  1:7756915/93‑1 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  2:1353397/93‑1 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             >  2:866182/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  1:4114849/93‑1 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  1:4173278/93‑1 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  1:4984747/93‑1 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            >  1:1362051/1‑93 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            <  2:2402784/93‑1 (MQ=255)

                                               cGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          <  2:3705433/93‑1 (MQ=255)

                                               cGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          <  1:1541605/93‑1 (MQ=255)

                                               cGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          <  1:5818167/93‑1 (MQ=255)

                                               cGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          >  1:2418590/1‑93 (MQ=255)

                                                 tttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCAt                                        <  1:4360228/93‑1 (MQ=255)

                                                  ttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATc                                       >  2:6687551/1‑93 (MQ=255)

                                                     gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    >  2:6694151/1‑93 (MQ=255)

                                                      tCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGa                                   <  1:1003542/93‑1 (MQ=255)

                                                       cAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGAt                                  <  2:6212408/93‑1 (MQ=255)

                                                           tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              >  2:4549551/1‑93 (MQ=255)

                                                           tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              <  2:1223841/93‑1 (MQ=255)

                                                            gAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGtt                             <  2:5583343/93‑1 (MQ=255)

                                                              aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTa                           >  1:7469120/1‑93 (MQ=255)

                                                              aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTa                           >  2:4442814/1‑93 (MQ=255)

                                                              aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTa                           >  2:7877708/1‑93 (MQ=255)

                                                               cAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTaa                          <  1:2435902/93‑1 (MQ=255)

                                                               cAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTaa                          <  2:4411403/93‑1 (MQ=255)

                                                                 gcgtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACa                        <  1:3887766/93‑1 (MQ=255)

                                                                  cgtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAg                       <  2:6894788/93‑1 (MQ=255)

                                                                   gtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGc                      <  2:3874489/93‑1 (MQ=255)

                                                                    tgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCa                     <  1:4909958/93‑1 (MQ=255)

                                                                    tgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCa                     >  2:2281893/1‑93 (MQ=255)

                                                                     gcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCaa                    >  1:5882180/1‑93 (MQ=255)

                                                                      cttctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   <  1:3252645/91‑1 (MQ=255)

                                                                      cgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   >  1:2644958/1‑93 (MQ=255)

                                                                      cgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   <  2:3003845/93‑1 (MQ=255)

                                                                       gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGCTCTGTTTAACAGCAAcc                  >  2:7569156/1‑93 (MQ=255)

                                                                       gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcc                  >  2:7569161/1‑93 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcag                 >  2:1677693/1‑91 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCg                 >  1:2049254/1‑93 (MQ=255)

                                                                         ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                <  1:3202534/93‑1 (MQ=255)

                                                                         ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                >  2:5335496/1‑93 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:7372564/93‑1 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:5784256/93‑1 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  2:3769283/93‑1 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:3045304/93‑1 (MQ=255)

                                                                             acgtgagcgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGa            <  1:2831034/93‑1 (MQ=255)

                                                                              cgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGAc           <  2:1543073/93‑1 (MQ=255)

                                                                                tgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCt         >  1:6641544/1‑93 (MQ=255)

                                                                                tgaacgtgCGCGAAACGCACGCCATGCTACTGAATGTGGTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCt         >  2:4019682/1‑93 (MQ=255)

                                                                                 gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        <  1:2258361/93‑1 (MQ=255)

                                                                                 gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        <  1:6459568/93‑1 (MQ=255)

                                                                                  aacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtc       <  2:5345497/93‑1 (MQ=255)

                                                                                   acgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtct      >  1:3555340/1‑93 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    >  1:2523228/1‑93 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    <  1:549119/93‑1 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAACAACCGTTTGACCTTCTCg    >  2:3824058/1‑93 (MQ=255)

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`