BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	996,175	A→G	G187G (GGT→GGC)	ycbP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	996,175	0	A	G	98.7%	739.7 / ‑2.5	238	G187G (GGT→GGC)	ycbP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (121/114); total (122/116)
Fisher's exact test for biased strand distribution p-value = 6.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 240 total aligned reads displayed.

GCTTCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTACCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACGGGTTTG  >  NC_000913/996085‑996264

gCTTCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGcc                                                                                         <  2:5460162/93‑1 (MQ=255)

 cTTCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCt                                                                                        >  1:7691256/1‑93 (MQ=255)

 cTTCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCt                                                                                        >  2:200814/1‑93 (MQ=255)

  ttCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTc                                                                                       >  2:2606154/1‑93 (MQ=255)

   tCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCg                                                                                      <  1:6345295/93‑1 (MQ=255)

     aGGCGAGGATTCTGCGGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCgaa                                                                                    <  2:5541619/93‑3 (MQ=255)

      ggggAGGATTCTGCAGCAACGCCAAAAGTAGAGACGCTAAGCAACCCCGCCAGCGCAAGTTTAATGATGTTACGCATGGGCATTGCCTCGCat                                                                                   <  2:6687036/90‑2 (MQ=255)

       gCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCaga                                                                                  <  2:291625/93‑1 (MQ=255)

       gCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCaga                                                                                  <  1:4183785/93‑1 (MQ=255)

       gCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCaga                                                                                  >  2:4170162/1‑93 (MQ=255)

         gAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAgaga                                                                                >  1:3156255/1‑93 (MQ=255)

           ggATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTACCTCGCAGAGACa                                                                              <  2:1707329/93‑1 (MQ=255)

             aTTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGa                                                                            <  2:6411310/93‑1 (MQ=255)

             aTTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGa                                                                            >  1:3468090/1‑93 (MQ=255)

              ttCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGaa                                                                           <  1:1696265/93‑1 (MQ=255)

              ttCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGaa                                                                           >  2:3670848/1‑93 (MQ=255)

              ttCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGaa                                                                           >  1:3380847/1‑93 (MQ=255)

               tCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAg                                                                          >  1:242788/1‑93 (MQ=255)

                  gcagcaACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTc                                                                       <  1:2400991/93‑1 (MQ=255)

                   cagcaCCCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCa                                                                      <  1:7060623/93‑1 (MQ=255)

                     gcaACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAgg                                                                    >  1:6496314/1‑93 (MQ=255)

                       aaCCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGaa                                                                  >  2:4799675/1‑93 (MQ=255)

                       aaCCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGaa                                                                  <  1:2087414/93‑1 (MQ=255)

                        aCCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAAc                                                                 <  1:5365700/93‑1 (MQ=255)

                           gCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTg                                                              <  2:4651954/93‑1 (MQ=255)

                             aaaaGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGaa                                                            <  2:4511613/93‑1 (MQ=255)

                             aaaaGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGaa                                                            >  2:3300894/1‑93 (MQ=255)

                              aaaGTAGAGACGCTAAGCAATCCCGCCGGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAAc                                                           >  2:1500252/1‑93 (MQ=255)

                              aaaGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAAc                                                           >  1:7111159/1‑93 (MQ=255)

                               aaGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACa                                                          <  2:3127155/93‑1 (MQ=255)

                                 gTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATc                                                        <  2:6347564/93‑1 (MQ=255)

                                 gTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATc                                                        >  1:5812701/1‑93 (MQ=255)

                                  tAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATcg                                                       <  1:725249/93‑1 (MQ=255)

                                  tAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATcg                                                       >  1:7920161/1‑93 (MQ=255)

                                   agagACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATcgc                                                      <  1:3558818/93‑1 (MQ=255)

                                   agagACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATcgc                                                      <  2:3550278/93‑1 (MQ=255)

                                   agagACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATcgc                                                      <  2:6639409/93‑1 (MQ=255)

                                        cGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGcggcgg                                                 <  1:1989292/93‑1 (MQ=255)

                                         gCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGt                                                <  2:4100494/93‑1 (MQ=255)

                                         gCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGt                                                >  1:7798185/1‑93 (MQ=255)

                                         gCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGt                                                >  1:134707/1‑93 (MQ=255)

                                             aGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCaa                                            >  2:1082248/1‑93 (MQ=255)

                                             aGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCaa                                            <  2:1055257/93‑1 (MQ=255)

                                             aGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCaa                                            <  2:4435359/93‑1 (MQ=255)

                                              gCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAt                                           >  1:629871/1‑93 (MQ=255)

                                              gCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAt                                           <  2:7102875/93‑1 (MQ=255)

                                               cAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtc                                          >  1:2655241/1‑92 (MQ=255)

                                                aaTCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgc                                         <  1:5128592/93‑1 (MQ=255)

                                                 aTCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcc                                        <  1:3611343/93‑1 (MQ=255)

                                                 aTCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcc                                        >  2:2727135/1‑93 (MQ=255)

                                                 aTCCCGCCAGCGCCAGTTTAATGATGTTACGCATGCGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcc                                        >  2:7925507/1‑93 (MQ=255)

                                                  tCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcct                                       <  2:1236668/93‑1 (MQ=255)

                                                  tCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcct                                       >  2:1977433/1‑93 (MQ=255)

                                                  tCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcct                                       <  1:261498/93‑1 (MQ=255)

                                                  tCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcct                                       >  2:5138347/1‑93 (MQ=255)

                                                   cccGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcctg                                      >  1:4033152/1‑93 (MQ=255)

                                                   cccGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcctg                                      <  2:7702069/93‑1 (MQ=255)

                                                    ccGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAAtgcctgc                                     >  1:43596/1‑93 (MQ=255)

                                                      gccagcgccagTTTAGTGATGTTACGCATGGGCATTGCCTCGCAGAGCCAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCCAtgcctgccc                                   <  2:7032662/93‑2 (MQ=255)

                                                      gccagcgccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCa                                   <  1:5032635/93‑1 (MQ=255)

                                                      gccagcgccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCa                                   <  2:4930880/93‑1 (MQ=255)

                                                        cagcgccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGCCAGAAGGTCAGGAACCTGAACATCGCGGCGGCGGAATGCCTCTCAGa                                 >  1:475673/1‑93 (MQ=255)

                                                         agcgccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGaa                                >  2:3488949/1‑93 (MQ=255)

                                                          gcgccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGaaa                               >  1:2883069/1‑93 (MQ=255)

                                                            gccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGt                             <  2:7470175/93‑1 (MQ=255)

                                                            gccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGt                             >  2:5155516/1‑93 (MQ=255)

                                                            gccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGt                             <  2:6130575/93‑1 (MQ=255)

                                                             ccagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGtt                            >  1:4496425/1‑93 (MQ=255)

                                                              cagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGttt                           >  1:5016646/1‑93 (MQ=255)

                                                              cagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGttt                           >  1:2159231/1‑93 (MQ=255)

                                                              cagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGttt                           <  2:7202934/93‑1 (MQ=255)

                                                              cagTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGttt                           >  1:3514044/1‑93 (MQ=255)

                                                               agTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTc                          <  1:2618531/93‑1 (MQ=255)

                                                               agTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTc                          >  2:3752131/1‑93 (MQ=255)

                                                                gTTTAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTCCCAGAAAGTTTCt                         >  2:6059381/1‑93 (MQ=255)

                                                                 tttAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTa                        <  1:1076057/93‑1 (MQ=255)

                                                                 tttAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTa                        <  2:6205276/93‑1 (MQ=255)

                                                                   tAATGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAgc                      <  1:4493981/93‑1 (MQ=255)

                                                                    aaTGATGTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAgcg                     >  1:4584960/1‑93 (MQ=255)

                                                                       gatgTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCgg                  >  1:5639650/1‑93 (MQ=255)

                                                                         tgTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTa                >  1:1589160/1‑93 (MQ=255)

                                                                          gTTACGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTAt               >  2:1584271/1‑93 (MQ=255)

                                                                             tcGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCaa            <  1:5457383/92‑1 (MQ=255)

                                                                             aCGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCaa            <  1:1450352/93‑1 (MQ=255)

                                                                             aCGCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCaa            >  2:2718142/1‑93 (MQ=255)

                                                                             aCGCATGGGCATGGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCaa            <  1:374887/93‑1 (MQ=255)

                                                                               gCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGa          <  2:2494856/93‑1 (MQ=255)

                                                                               gCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGa          >  1:848098/1‑93 (MQ=255)

                                                                               gCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGa          <  2:2961825/93‑1 (MQ=255)

                                                                               gCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGa          <  1:2960962/93‑1 (MQ=255)

                                                                               gCATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGa          <  1:6837504/93‑1 (MQ=255)

                                                                                cATGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGAc         >  2:578965/1‑93 (MQ=255)

                                                                                  tGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACgg       >  1:6376771/1‑93 (MQ=255)

                                                                                  tGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACgg       >  1:5903809/1‑93 (MQ=255)

                                                                                  tGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACgg       >  2:257156/1‑93 (MQ=255)

                                                                                  tGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACgg       >  2:5420858/1‑93 (MQ=255)

                                                                                  tGGGCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACgg       >  1:3363076/1‑93 (MQ=255)

                                                                                   gggCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACggg      <  2:7333565/93‑1 (MQ=255)

                                                                                     gCATTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACGGGtt    <  2:2142184/93‑1 (MQ=255)

                                                                                       aTTGCCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACGGGTTTg  >  2:2302830/1‑93 (MQ=255)

GCTTCAGGCGAGGATTCTGCAGCAACCGCAAAAGTAGAGACGCTAAGCAATCCCGCCAGCGCCAGTTTAATGATGTTACGCATGGGCATTACCTCGCAGAGACAGAAGGTCAGGAACCTGAACATCGCGGCGGTGCAATGCCTGCCAGAAAGTTTCTAGCGCGGTATCAAGACGGGTTTG  >  NC_000913/996085‑996264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`