BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	999,571	A→G	Q378R (CAG→CGG)	ycbS →	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	999,571	0	A	G	100.0%	700.3 / NA	222	Q378R (CAG→CGG)	ycbS	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (99/123); total (99/123)

Only 100 of 231 total aligned reads displayed.

CGTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTACC  >  NC_000913/999481‑999660

 gTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGga                                                                                        <  1:1659225/93‑1 (MQ=255)

 cttCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGga                                                                                        <  1:2792624/92‑1 (MQ=255)

   tctcCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGgaga                                                                                      <  1:2871013/93‑1 (MQ=255)

     tcCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGc                                                                                    >  1:1812381/1‑93 (MQ=255)

       cAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCaa                                                                                  >  2:7573883/1‑93 (MQ=255)

        aGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCaaa                                                                                 >  2:6189160/1‑93 (MQ=255)

         gtgtGCCATTACTCCAGCGTCAGGGGCGATTCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAAt                                                                                <  1:1144721/93‑1 (MQ=255)

         gtgtGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAAt                                                                                >  1:5025876/1‑93 (MQ=255)

           gtgCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAAttt                                                                              <  1:3967092/93‑1 (MQ=255)

           gtcccATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAAttt                                                                              <  1:2642017/90‑1 (MQ=255)

             gCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGc                                                                            <  2:5805657/93‑1 (MQ=255)

               cATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGccc                                                                          >  2:3794074/1‑93 (MQ=255)

               cATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGccc                                                                          <  2:181283/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  1:3736084/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         >  2:7915009/1‑93 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  1:4179225/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  2:4702268/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  2:5041942/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  2:5125351/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         <  2:7261588/93‑1 (MQ=255)

                aTTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCa                                                                         >  1:2043039/1‑93 (MQ=255)

                 ttACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAg                                                                        >  1:2581263/1‑93 (MQ=255)

                   aCTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGc                                                                      <  1:3028228/93‑1 (MQ=255)

                   aCTCCAGCGGCAGGGGCCAATCAAATACTCGGTGACACTGGCGAAATACAGAACCAATAATAATGAACAGCGGGAGAGCAAATTTGCCCAGGc                                                                      <  2:1841178/93‑1 (MQ=255)

                    cTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGcc                                                                     >  2:7764300/1‑93 (MQ=255)

                    cTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGcc                                                                     >  1:2255657/1‑93 (MQ=255)

                      ccAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCAc                                                                   >  1:6636017/1‑93 (MQ=255)

                       cAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACg                                                                  >  2:4911667/1‑93 (MQ=255)

                       cAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGAAGAGAAAATTTCCCCAGGCCACg                                                                  >  1:6056157/1‑93 (MQ=255)

                           gTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGc                                                              <  2:25286/93‑1 (MQ=255)

                           gTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGc                                                              >  1:7768161/1‑93 (MQ=255)

                            tCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCa                                                             <  2:5432230/93‑1 (MQ=255)

                            tCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCa                                                             >  2:6554614/1‑93 (MQ=255)

                            tCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCa                                                             >  2:6859261/1‑93 (MQ=255)

                               ggggCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTg                                                          <  2:2362311/93‑1 (MQ=255)

                               ggggCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTg                                                          >  1:5549523/1‑93 (MQ=255)

                                gggCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTgg                                                         <  2:4419458/93‑1 (MQ=255)

                                gggCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTgg                                                         <  1:3250086/93‑1 (MQ=255)

                                gggCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTgg                                                         <  1:4879011/93‑1 (MQ=255)

                                   cGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGc                                                      <  1:742601/93‑1 (MQ=255)

                                    gAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCg                                                     >  2:1558952/1‑93 (MQ=255)

                                     aaTCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGCGGGGCgg                                                    >  1:1158259/1‑93 (MQ=255)

                                      aTCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGa                                                   >  2:275562/1‑93 (MQ=255)

                                        cAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGAcc                                                 <  1:6191168/93‑1 (MQ=255)

                                          aaTACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGt                                               >  1:1049440/1‑93 (MQ=255)

                                           aTACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTg                                              <  1:820605/93‑1 (MQ=255)

                                            tACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTgg                                             >  2:3499310/1‑93 (MQ=255)

                                                cgGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGaa                                         <  2:6809487/93‑1 (MQ=255)

                                                 ggTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAAc                                        <  1:4460354/93‑1 (MQ=255)

                                                  gTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACg                                       >  2:5328042/1‑93 (MQ=255)

                                                     acacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGAcc                                    <  2:3356822/93‑1 (MQ=255)

                                                     acacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGAcc                                    <  2:6086347/93‑1 (MQ=255)

                                                     acacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGAcc                                    <  1:687462/93‑1 (MQ=255)

                                                     acacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGAcc                                    <  1:5215531/93‑1 (MQ=255)

                                                      cacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCt                                   <  1:2916877/93‑1 (MQ=255)

                                                      cacTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCt                                   >  2:3992383/1‑93 (MQ=255)

                                                      cacTGGCGAAATACAGAACAAATCGTAATGAACAGCGGGAGAGCAAATTTGACCAGGCCAAGTTGCAGTGCGGCGGACCGTAAGGAACGGCCt                                   <  2:714364/93‑1 (MQ=255)

                                                       acTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTg                                  <  2:2673789/93‑1 (MQ=255)

                                                        cTGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGTCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTgg                                 <  1:5163601/93‑1 (MQ=255)

                                                         tGGCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGCCCGTGGGGAACGACCTGGt                                >  1:1303762/1‑93 (MQ=255)

                                                          ggCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTa                               <  1:2853218/93‑1 (MQ=255)

                                                          ggCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTa                               <  2:7709985/93‑1 (MQ=255)

                                                          ggCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTa                               <  1:4079628/93‑1 (MQ=255)

                                                           gCGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAt                              <  2:7901663/93‑1 (MQ=255)

                                                            cGAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtg                             <  2:3128887/93‑1 (MQ=255)

                                                             gAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtgg                            >  2:420330/1‑93 (MQ=255)

                                                             gAAATACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtgg                            >  1:7349138/1‑93 (MQ=255)

                                                              aaaTACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggt                           <  2:4391047/93‑1 (MQ=255)

                                                               aaTACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtg                          >  1:6504921/1‑93 (MQ=255)

                                                               aaTACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtg                          <  1:6333222/93‑1 (MQ=255)

                                                               aaTACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtg                          <  2:1087742/93‑1 (MQ=255)

                                                                aTACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtgg                         >  1:7593713/1‑93 (MQ=255)

                                                                 tACAGAACCAATAGTAATGAACAGCGGTAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtggt                        <  2:6700025/93‑1 (MQ=255)

                                                                 tACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtggt                        <  1:7165400/93‑1 (MQ=255)

                                                                 tACAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtggg                        >  2:635923/1‑92 (MQ=255)

                                                                  aCAGAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTAtggtggtg                       <  2:2038073/93‑1 (MQ=255)

                                                                     gAACCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGAc                    <  2:5943833/93‑1 (MQ=255)

                                                                      aaCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACa                   <  2:1456702/93‑1 (MQ=255)

                                                                      aaCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACa                   >  1:3466974/1‑93 (MQ=255)

                                                                       aCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACaa                  <  1:7318516/93‑1 (MQ=255)

                                                                       aCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACaa                  <  1:5687181/93‑1 (MQ=255)

                                                                       aCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACaa                  <  1:149152/93‑1 (MQ=255)

                                                                       aCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACaa                  >  1:2426117/1‑93 (MQ=255)

                                                                       aCCAATAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACaa                  >  2:4287264/1‑93 (MQ=255)

                                                                          aaTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAatat               <  1:5653716/93‑1 (MQ=255)

                                                                          aaTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAatat               <  2:7470384/93‑1 (MQ=255)

                                                                           aTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATg              >  2:1358019/1‑93 (MQ=255)

                                                                           aTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATg              >  2:1780719/1‑93 (MQ=255)

                                                                           aTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATg              <  1:883329/93‑1 (MQ=255)

                                                                           aTAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATg              <  2:5040957/93‑1 (MQ=255)

                                                                            tAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGc             >  1:3203043/1‑93 (MQ=255)

                                                                            tAGTAATGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGc             >  2:7383688/1‑93 (MQ=255)

                                                                                 aTGAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAat        >  1:4709566/1‑93 (MQ=255)

                                                                                   gAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAatat      >  1:220693/1‑93 (MQ=255)

                                                                                   gAACAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAatat      >  1:7666672/1‑93 (MQ=255)

                                                                                    aaCAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATAtt     <  2:2858894/93‑1 (MQ=255)

                                                                                     aCAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTa    <  2:5993033/93‑1 (MQ=255)

                                                                                     aCAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTa    <  1:5102618/93‑1 (MQ=255)

                                                                                     aCAGCGGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTa    <  1:5406126/93‑1 (MQ=255)

                                                                                      cagcggGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTAc   <  2:5483908/93‑1 (MQ=255)

CGTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTACC  >  NC_000913/999481‑999660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`