BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,056,882	T→C	Y99C (TAC→TGC)	torR ←	TorR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,056,882	0	T	C	100.0%	580.8 / NA	184	Y99C (TAC→TGC)	torR	TorR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/102); total (82/102)

Only 100 of 188 total aligned reads displayed.

GCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGTAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTTC  >  NC_000913/1056793‑1056970

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  2:7453859/93‑1 (MQ=255)

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        >  1:5758116/1‑93 (MQ=255)

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  1:3928304/93‑1 (MQ=255)

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  2:7266084/93‑1 (MQ=255)

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  2:7102055/93‑1 (MQ=255)

gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  1:2797658/93‑1 (MQ=255)

 cGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATc                                                                                       <  1:4618298/93‑1 (MQ=255)

 cGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATc                                                                                       <  1:350715/93‑1 (MQ=255)

   gTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑t                                                                                    >  1:3418756/1‑93 (MQ=255)

   gTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑t                                                                                    >  2:3223882/1‑93 (MQ=255)

    ttGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑Tc                                                                                   >  2:3442461/1‑93 (MQ=255)

    ttGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑Tc                                                                                   >  1:3191807/1‑93 (MQ=255)

    ttGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑Tc                                                                                   >  1:7809291/1‑93 (MQ=255)

     tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCt                                                                                  <  2:1759674/93‑1 (MQ=255)

     tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCt                                                                                  >  1:3191806/1‑93 (MQ=255)

     tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCt                                                                                  <  2:2694989/93‑1 (MQ=255)

      gAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTg                                                                                 >  2:7120423/1‑93 (MQ=255)

       aGCTTGTCGCGCGAGGTCGATTCGCCAGAGCATATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTgc                                                                                <  1:7436053/93‑1 (MQ=255)

          ttGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGcc                                                                             >  2:7431639/1‑93 (MQ=255)

          ttGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGcc                                                                             >  1:1115510/1‑93 (MQ=255)

            gTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCa                                                                           <  1:3014840/93‑1 (MQ=255)

            gTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCa                                                                           <  2:39712/93‑1 (MQ=255)

             tCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCAt                                                                          >  1:6920320/1‑93 (MQ=255)

             tCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCAt                                                                          <  2:7332007/93‑1 (MQ=255)

              cgcgcgAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCAtt                                                                         <  1:970047/93‑1 (MQ=255)

                cgcgAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTc                                                                       <  2:4998783/93‑1 (MQ=255)

                  cgAGGTCGGTTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCa                                                                     <  2:6331739/93‑1 (MQ=255)

                    aGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGc                                                                   >  1:796825/1‑93 (MQ=255)

                    aGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGc                                                                   <  2:737562/93‑1 (MQ=255)

                     ggTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGcc                                                                  <  2:2460887/93‑1 (MQ=255)

                     ggTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGcc                                                                  >  1:6631163/1‑93 (MQ=255)

                        cGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCcaa                                                               >  2:3828187/1‑93 (MQ=255)

                         gATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCcaac                                                              >  1:6191984/1‑93 (MQ=255)

                          aTTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCcaaca                                                             >  1:1607264/1‑93 (MQ=255)

                           ttCGCCAGAGCAGATTTTTCACCGGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCcaacaa                                                            <  2:4293503/93‑1 (MQ=255)

                           ttCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCcaacaa                                                            <  2:3592058/93‑1 (MQ=255)

                             cGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATa                                                          <  2:352884/93‑1 (MQ=255)

                             cGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATa                                                          <  1:203032/93‑1 (MQ=255)

                             cGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATa                                                          <  2:2823227/93‑1 (MQ=255)

                              gCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATAc                                                         <  1:7576215/93‑1 (MQ=255)

                              gCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATAc                                                         <  1:3212662/93‑1 (MQ=255)

                              gCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATAc                                                         <  1:567575/93‑1 (MQ=255)

                               ccAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACg                                                        <  2:7376244/93‑1 (MQ=255)

                                 agagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGt                                                      <  1:5844043/93‑1 (MQ=255)

                                 agagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGt                                                      <  2:3945346/93‑1 (MQ=255)

                                   agCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCa                                                    <  2:5144124/93‑1 (MQ=255)

                                   agCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCa                                                    >  2:1042881/1‑93 (MQ=255)

                                   agCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCa                                                    >  2:2984590/1‑93 (MQ=255)

                                    gCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCaa                                                   <  1:2117592/93‑1 (MQ=255)

                                     cAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAAt                                                  <  1:2011999/93‑1 (MQ=255)

                                      aGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATc                                                 >  2:4440172/1‑93 (MQ=255)

                                      aGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATc                                                 >  2:1981814/1‑93 (MQ=255)

                                         tttttCACCCGTTCTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGa                                              <  2:3727520/93‑1 (MQ=255)

                                         tttttCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGa                                              >  2:4609838/1‑93 (MQ=255)

                                          ttttCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGAt                                             >  1:5254907/1‑93 (MQ=255)

                                           tttCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATc                                            <  1:4186198/93‑1 (MQ=255)

                                             tCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGc                                          <  1:7520391/93‑1 (MQ=255)

                                               ccccGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTg                                        <  1:972961/92‑1 (MQ=255)

                                               aCCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTg                                        >  1:5732602/1‑93 (MQ=255)

                                                cccGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGc                                       >  1:5334203/1‑93 (MQ=255)

                                                 ccGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCg                                      >  1:4623676/1‑93 (MQ=255)

                                                   gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                    <  2:6222351/93‑1 (MQ=255)

                                                   gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                    >  2:3568642/1‑93 (MQ=255)

                                                   gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                    <  1:4305581/93‑1 (MQ=255)

                                                     actacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCg                                  >  1:1053783/1‑93 (MQ=255)

                                                      ctacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCgg                                 >  1:5501770/1‑93 (MQ=255)

                                                      ctacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCgg                                 >  2:6410814/1‑93 (MQ=255)

                                                       tacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGt                                >  2:7934208/1‑93 (MQ=255)

                                                       tacCAGTTCGCGCAGCTCCAGCGGTTTGGTGACGCAATCGTTCTAGACCCTTTTCAATCTGAA‑AATACCGTCAATCCGATCGCTGCGTCCgga                                >  2:7691833/1‑92 (MQ=255)

                                                         ccAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTaa                              <  2:859779/93‑1 (MQ=255)

                                                         ccAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTaa                              <  1:6713757/93‑1 (MQ=255)

                                                          cAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAc                             >  1:6290776/1‑93 (MQ=255)

                                                          cAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAc                             >  2:5095932/1‑93 (MQ=255)

                                                           aGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAcc                            >  1:2282562/1‑93 (MQ=255)

                                                           aGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAcc                            >  2:4696476/1‑93 (MQ=255)

                                                             ttCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAg                          <  1:7494923/93‑1 (MQ=255)

                                                             ttCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAg                          >  1:6869617/1‑93 (MQ=255)

                                                             ttCGCGCAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAg                          <  1:1808428/93‑1 (MQ=255)

                                                              tCGCGCAGTGCCAGCGGTTGGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGa                         <  2:4631074/93‑1 (MQ=255)

                                                                gcgcAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaat                       <  1:24591/93‑1 (MQ=255)

                                                                gcgcAGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaat                       <  2:165267/93‑1 (MQ=255)

                                                                    aGTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATc                   >  1:4727578/1‑93 (MQ=255)

                                                                     gTTCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATcc                  >  2:4765878/1‑93 (MQ=255)

                                                                      ttCCAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATccc                 <  2:269274/93‑1 (MQ=255)

                                                                        ccAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCa               >  1:1317892/1‑93 (MQ=255)

                                                                        ccAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCa               <  2:3087688/93‑1 (MQ=255)

                                                                         cAGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAc              <  2:5333776/93‑1 (MQ=255)

                                                                          aGCGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAcc             >  1:7174914/1‑93 (MQ=255)

                                                                            cGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGt           <  1:2879600/93‑1 (MQ=255)

                                                                            cGGTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGt           <  1:6392993/93‑1 (MQ=255)

                                                                              gTTTGGTGACGGCATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTg         <  1:1340542/93‑1 (MQ=255)

                                                                              gTTTGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTg         >  2:6948876/1‑93 (MQ=255)

                                                                               tttGGTGACGCAATCG‑TCTGCGCCCATTTCCAGTCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa        >  2:6094124/1‑93 (MQ=255)

                                                                               tttGGTGACGCAATCG‑TCTGCGCCCATTTCCAGTCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa        >  2:6094123/1‑93 (MQ=255)

                                                                               tttGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa        <  1:3794325/93‑1 (MQ=255)

                                                                               tttGGTGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa        <  2:55696/93‑1 (MQ=255)

                                                                                    tGACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGtt   <  1:4701355/93‑1 (MQ=255)

                                                                                     gACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtc  >  1:1403983/1‑93 (MQ=255)

                                                                                     gACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtc  <  1:186892/93‑1 (MQ=255)

                                                                                     gACGCAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtc  >  2:1538313/1‑93 (MQ=255)

GCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGTAATCG‑TCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTTC  >  NC_000913/1056793‑1056970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`