BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,061,601	T→C	C194R (TGC→CGC)	torD →	TorD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,061,601	0	T	C	99.6%	804.1 / ‑5.8	257	C194R (TGC→CGC)	torD	TorD
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (110/146); total (111/146)
Fisher's exact test for biased strand distribution p-value = 4.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 265 total aligned reads displayed.

TGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGC  >  NC_000913/1061511‑1061689

tGGTTACCAGAGTTTGTTGCGCGTGGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAgcgc                                                                                        >  2:7585653/1‑93 (MQ=255)

 ggTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGcgcg                                                                                       >  2:1497744/1‑93 (MQ=255)

 ggTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGcgcg                                                                                       >  1:4473252/1‑93 (MQ=255)

  gTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGa                                                                                      <  2:4425448/93‑1 (MQ=255)

    tACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGacc                                                                                    <  1:7587560/93‑1 (MQ=255)

      ccAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccac                                                                                  >  1:1718936/1‑93 (MQ=255)

       cAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccacc                                                                                 >  1:7361871/1‑93 (MQ=255)

       cAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccacc                                                                                 >  2:2759949/1‑93 (MQ=255)

        agagTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGAccacca                                                                                >  1:3628289/1‑93 (MQ=255)

         gagTTTGTTGCGCGTTGTCGTCAGTATGACGGCTTTGGTTTTTACGCGGCCCTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaa                                                                               >  2:1562655/1‑93 (MQ=255)

         gagTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaa                                                                               >  1:7460579/1‑93 (MQ=255)

         gagTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaa                                                                               >  2:6935259/1‑93 (MQ=255)

          agTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaaa                                                                              >  2:7672068/1‑93 (MQ=255)

           gtgtgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCATTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaaaa                                                                             >  2:7019083/4‑93 (MQ=255)

            tttGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAAc                                                                            <  1:4559823/93‑1 (MQ=255)

             ttgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACa                                                                           <  2:5709558/93‑1 (MQ=255)

              tgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAg                                                                          >  2:5403398/1‑93 (MQ=255)

              tgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAg                                                                          >  1:6357043/1‑93 (MQ=255)

              tgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAg                                                                          <  2:7381893/93‑1 (MQ=255)

               gttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGCGTTAGTGGAGCGCGACCACCAAAACAGa                                                                         >  1:2530181/1‑93 (MQ=255)

                ttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGAt                                                                        <  2:4823042/93‑1 (MQ=255)

                  gcgcGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATaa                                                                      <  2:5207246/93‑1 (MQ=255)

                  gcgcGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATaa                                                                      <  2:3483360/93‑1 (MQ=255)

                    gcgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcg                                                                    >  2:3870670/1‑93 (MQ=255)

                    gcgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcg                                                                    <  2:2051100/93‑1 (MQ=255)

                     cgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgt                                                                   >  2:1688844/1‑93 (MQ=255)

                     cgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgt                                                                   <  1:6547055/93‑1 (MQ=255)

                      gTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtc                                                                  >  1:5771482/1‑93 (MQ=255)

                       ttGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtcg                                                                 >  1:5963897/1‑93 (MQ=255)

                        tGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtcgt                                                                <  1:1591676/93‑1 (MQ=255)

                            gtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTtgt                                                            >  2:1451621/1‑93 (MQ=255)

                            gtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTtgt                                                            >  1:6649818/1‑93 (MQ=255)

                              cAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgc                                                          <  1:1505937/93‑1 (MQ=255)

                                gTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgcgc                                                        >  1:683331/1‑93 (MQ=255)

                                gTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgcgc                                                        >  1:854561/1‑93 (MQ=255)

                                  aTGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCt                                                      >  2:5735340/1‑93 (MQ=255)

                                    gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGa                                                    >  2:6175729/1‑93 (MQ=255)

                                     aCAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaa                                                   >  1:1832297/1‑93 (MQ=255)

                                     aCAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaa                                                   >  2:5948976/1‑93 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAAATAACGTCGTTTGTGCGCCTGaaaa                                                 >  2:5163996/1‑93 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaaa                                                 >  2:104874/1‑93 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaaa                                                 <  1:2031239/93‑1 (MQ=255)

                                        gCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAg                                                >  1:7202898/1‑93 (MQ=255)

                                         cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGa                                               <  1:1107761/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                              >  2:1080323/1‑93 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                              <  2:3448276/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                              >  1:7313755/1‑93 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                              <  2:5763630/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                              >  1:3804135/1‑93 (MQ=255)

                                            tGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcgc                                            >  1:6572355/1‑93 (MQ=255)

                                              gTTTTTACGCGGCAGTAAGCCAGTTAGCGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGACAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                          <  2:6158497/93‑1 (MQ=255)

                                              gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                          >  2:1088175/1‑93 (MQ=255)

                                              gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                          <  2:2310934/93‑1 (MQ=255)

                                               tttttACGCGGCACTATGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt                                         <  1:1088191/93‑1 (MQ=255)

                                               tttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt                                         <  2:3646356/93‑1 (MQ=255)

                                               tttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt                                         >  2:2866769/1‑93 (MQ=255)

                                                ttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt                                        >  1:1010227/1‑93 (MQ=255)

                                                 tttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTa                                       <  2:4111549/93‑1 (MQ=255)

                                                  ttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAg                                      <  1:4256997/93‑1 (MQ=255)

                                                   tACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGc                                     <  1:6929702/93‑1 (MQ=255)

                                                    tcgcgGCAGTAAGGCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCg                                    <  1:4649762/92‑1 (MQ=255)

                                                      gcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGtg                                  >  1:4828582/1‑92 (MQ=255)

                                                      gcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTc                                  <  2:1147240/93‑1 (MQ=255)

                                                            cTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCa                            >  2:6762730/1‑93 (MQ=255)

                                                            cTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCa                            <  2:2616447/93‑1 (MQ=255)

                                                            cTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCa                            >  2:6602708/1‑93 (MQ=255)

                                                            cTAAGCCAGGTATTGCTGGTGTTAGGGGAGCGCGACCACCAAAACAGGTAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCa                            <  1:509307/93‑1 (MQ=255)

                                                             tAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg                           <  2:3355413/93‑1 (MQ=255)

                                                             tAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg                           >  2:787652/1‑93 (MQ=255)

                                                             tAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg                           >  1:534582/1‑93 (MQ=255)

                                                             tAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg                           <  1:5505936/93‑1 (MQ=255)

                                                             tAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg                           <  1:826360/93‑1 (MQ=255)

                                                               aGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGc                         >  2:3984252/1‑93 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                        >  1:7794221/1‑93 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                        >  1:5633912/1‑93 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                        <  2:3537381/93‑1 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                        <  2:1882550/93‑1 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGCGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                        <  1:1270383/93‑1 (MQ=255)

                                                                 ccAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAt                       <  2:6702436/93‑1 (MQ=255)

                                                                   aGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                     <  2:4067480/93‑1 (MQ=255)

                                                                   aGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                     >  1:7767982/1‑93 (MQ=255)

                                                                    gTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTAt                    <  1:3162435/93‑1 (MQ=255)

                                                                    gTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTAt                    >  1:140481/1‑93 (MQ=255)

                                                                     ttATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                   >  2:285552/1‑93 (MQ=255)

                                                                     ttATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                   <  1:189809/93‑1 (MQ=255)

                                                                     ttATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                   >  1:2506804/1‑93 (MQ=255)

                                                                       aTTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgc                 <  2:5599819/93‑1 (MQ=255)

                                                                            tGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGt            <  1:3137472/93‑1 (MQ=255)

                                                                             ggTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAGAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGtt           <  1:7722909/93‑1 (MQ=255)

                                                                             ggTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGtt           <  2:4330133/93‑1 (MQ=255)

                                                                               tgtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGc         >  2:5991237/1‑93 (MQ=255)

                                                                                gtTAGTGGAGCGCGCCCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc        <  1:3903228/93‑1 (MQ=255)

                                                                                gtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc        >  1:2779866/1‑93 (MQ=255)

                                                                                gtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc        >  1:7527625/1‑93 (MQ=255)

                                                                                 ttAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCg       >  2:5930920/1‑93 (MQ=255)

                                                                                 ttAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCg       >  2:219272/1‑93 (MQ=255)

                                                                                   aGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGa     <  2:6412586/93‑1 (MQ=255)

                                                                                    gTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt    <  2:5536727/93‑1 (MQ=255)

                                                                                    gTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt    <  2:4444450/93‑1 (MQ=255)

                                                                                     tGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATg   >  2:2771246/1‑93 (MQ=255)

TGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGC  >  NC_000913/1061511‑1061689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`