BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,071,190	T→C	T65A (ACG→GCG)	b1010 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,071,190	0	T	C	99.4%	555.7 / ‑5.2	180	T65A (ACG→GCG)	b1010	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (98/81); total (99/81)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

Only 100 of 195 total aligned reads displayed.

CGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGTCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAA  >  NC_000913/1071100‑1071278

cGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGcct                                                                                        <  2:6793975/93‑1 (MQ=255)

cGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGcct                                                                                        >  1:5639940/1‑93 (MQ=255)

  gCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCg                                                                                      >  2:7934408/1‑93 (MQ=255)

   cGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGa                                                                                     >  1:3842884/1‑93 (MQ=255)

    gTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGAt                                                                                    <  1:6481647/93‑1 (MQ=255)

    gTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGAt                                                                                    >  2:5504674/1‑93 (MQ=255)

     tAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATc                                                                                   >  2:4584649/1‑93 (MQ=255)

     tAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATc                                                                                   <  2:2050175/93‑1 (MQ=255)

        aTTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCAcc                                                                                >  2:2389686/1‑93 (MQ=255)

        aTTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCAcc                                                                                >  1:4900891/1‑93 (MQ=255)

         tttCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCt                                                                               >  1:7602566/1‑93 (MQ=255)

         tttCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCt                                                                               <  2:701510/93‑1 (MQ=255)

         tttCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCt                                                                               >  2:4936093/1‑93 (MQ=255)

           tCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTg                                                                             >  1:6354109/1‑93 (MQ=255)

            cGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGc                                                                            <  1:7378212/93‑1 (MQ=255)

            cGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGc                                                                            <  1:381687/93‑1 (MQ=255)

            cGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGc                                                                            <  1:6688114/93‑1 (MQ=255)

              ttAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCgg                                                                          <  2:267023/93‑1 (MQ=255)

                 aTCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATa                                                                       >  1:1932738/1‑93 (MQ=255)

                 aTCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATa                                                                       <  1:783038/93‑1 (MQ=255)

                   cgcgGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGt                                                                     <  2:2259988/93‑1 (MQ=255)

                    gcggcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGtt                                                                    >  2:4391257/1‑93 (MQ=255)

                     cggcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGttt                                                                   <  1:3015270/93‑1 (MQ=255)

                      ggcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTc                                                                  >  2:307675/1‑93 (MQ=255)

                       gcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCTATCACCTTGCGGATAGtttac                                                                 >  1:7482835/1‑91 (MQ=255)

                       gcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATATTTTcc                                                                 >  2:1294234/1‑93 (MQ=255)

                       gcgTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTcc                                                                 <  2:3413682/93‑1 (MQ=255)

                         gTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAg                                                               >  1:2396090/1‑93 (MQ=255)

                           aaTTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGTCTCGATCACCTTGCGGATAGTTTCCAGaa                                                             >  1:6868800/1‑93 (MQ=255)

                             tttttCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACg                                                           >  2:6155817/1‑93 (MQ=255)

                              ttttCCAGTCGGTAATAAAGATGCTGTTGAAGATCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGt                                                          <  1:6252473/93‑1 (MQ=255)

                               tttCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTg                                                         <  1:99457/93‑1 (MQ=255)

                               tttCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTg                                                         <  1:2214080/93‑1 (MQ=255)

                               tttCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTg                                                         <  2:2106671/93‑1 (MQ=255)

                                ttCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTgg                                                        <  1:1038353/93‑1 (MQ=255)

                                   cAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCgg                                                     >  2:2238877/1‑93 (MQ=255)

                                   cAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCgg                                                     >  1:3958669/1‑93 (MQ=255)

                                     gTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCTCCTTGCGGATAGTTTCCAGAACGTGGCGGGt                                                   <  1:471485/93‑1 (MQ=255)

                                     gTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGt                                                   >  2:6439783/1‑93 (MQ=255)

                                     gTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGt                                                   <  2:6311008/93‑1 (MQ=255)

                                      tCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCCCCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGtt                                                  <  2:2777987/93‑1 (MQ=255)

                                      tCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCgggct                                                  >  1:3670719/1‑91 (MQ=255)

                                        ggTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGgttt                                                >  2:7543158/1‑92 (MQ=255)

                                        ggTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTg                                                >  2:3560845/1‑93 (MQ=255)

                                         gTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTgc                                               <  1:5799798/93‑1 (MQ=255)

                                          taataaAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTgcg                                              >  1:1094243/1‑93 (MQ=255)

                                           aataaAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGttttggc                                             >  2:5576565/1‑89 (MQ=255)

                                           aataaAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGgtttggc                                             >  2:5901909/1‑89 (MQ=255)

                                             taaAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCt                                           <  2:6259095/93‑1 (MQ=255)

                                             taaAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCt                                           >  1:7141085/1‑93 (MQ=255)

                                                aGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTg                                        <  2:5822147/93‑1 (MQ=255)

                                                aGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTg                                        >  1:5535031/1‑93 (MQ=255)

                                                aGATGCTGGTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGGACGTGGCGGGTTTGCGCCTTTg                                        <  2:2318665/93‑1 (MQ=255)

                                                 gATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTgg                                       >  2:6738974/1‑93 (MQ=255)

                                                 gATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTgg                                       >  2:6654052/1‑93 (MQ=255)

                                                 gATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTgg                                       >  1:2685842/1‑93 (MQ=255)

                                                  aTGCTGTTGAAGGTCACATCCGCCATCGTGCCGCCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTggg                                      <  2:5402349/93‑1 (MQ=255)

                                                     cTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCa                                   <  1:4635688/93‑1 (MQ=255)

                                                      tGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCAt                                  <  1:765829/93‑1 (MQ=255)

                                                      tGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCAt                                  >  1:7292888/1‑93 (MQ=255)

                                                      tGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGAGTGCGGCTTTTGGTCAt                                  >  2:1892306/1‑93 (MQ=255)

                                                       gTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATc                                 <  2:2591628/93‑1 (MQ=255)

                                                          gAAGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCATCGGc                              >  1:6922743/1‑93 (MQ=255)

                                                           aaGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCa                             >  1:1178929/1‑93 (MQ=255)

                                                            aGGTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCATCGGGaa                            >  2:2382034/1‑93 (MQ=255)

                                                             ggTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCaaa                           >  2:3011310/1‑93 (MQ=255)

                                                              gTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGGCATCGGCAAAc                          >  1:1804221/1‑93 (MQ=255)

                                                              gTCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCCTTTGGTCATCGGCAAAc                          >  1:2962962/1‑93 (MQ=255)

                                                               tCACATCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACa                         <  1:3126047/93‑1 (MQ=255)

                                                               tCACATCCGCCATCGAGCCACCCGCCGCCCCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTAGGCCTTTGGGTTCTACGCAAACa                         >  2:7296597/1‑93 (MQ=255)

                                                                cacaTCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGACCGCGGCTGGGTTGTGCCTTTGGGTCATAGGCAAACAg                        >  1:3337839/1‑93 (MQ=255)

                                                                  caTCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCa                      <  2:6815640/93‑1 (MQ=255)

                                                                  caTCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTTGGTCCTCGGCAAACAGCa                      >  2:2948024/1‑93 (MQ=255)

                                                                   ctCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCAc                     <  1:1909340/92‑1 (MQ=255)

                                                                    tCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGGCAACAGCACg                    >  1:3585632/1‑93 (MQ=255)

                                                                    tCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACg                    <  1:7775208/93‑1 (MQ=255)

                                                                    tCCGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGGCATCGGCAAACAGCACg                    >  2:1749532/1‑93 (MQ=255)

                                                                     ccGCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGACTTTGGGTCATCGGCAAACAGCACGt                   >  2:3861996/1‑93 (MQ=255)

                                                                       gCCATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTTGGTCATCGGCAAACAGCACGgta                 >  1:4778166/1‑93 (MQ=255)

                                                                       cccATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGtta                 <  1:1657164/92‑1 (MQ=255)

                                                                        ccATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGttat                <  1:3927123/93‑1 (MQ=255)

                                                                        ccATCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTTCGCCTTTTGGGCATCGGCAAACAGCACGctat                >  2:4468840/1‑93 (MQ=255)

                                                                          aTCGTGCCGCCCGCCGCCACAATCACCTTGCGGATAGTAACCAGACCGTGGATGTTTTGCCGCTTGGGATCAGTGGCAAACCGGACGttatta              <  2:3743690/93‑1 (MQ=255)

                                                                          aTCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGttatta              <  1:2320789/93‑1 (MQ=255)

                                                                          aTCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGttatta              <  1:3288006/93‑1 (MQ=255)

                                                                           tCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCATCGGCAAACAGCACGTtattat             >  2:4199274/1‑93 (MQ=255)

                                                                           tCGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCCTTGGGTCATCGGCAAACACAACGttctttt             >  1:2604927/1‑91 (MQ=255)

                                                                            cGTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATg            <  1:2536093/93‑1 (MQ=255)

                                                                             gTGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGt           <  1:6056861/93‑1 (MQ=255)

                                                                              tGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGTGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGtt          >  1:5214138/1‑93 (MQ=255)

                                                                              tGCCACCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCATCGGCAAACAGCACGGTATTATGtt          >  2:3720306/1‑93 (MQ=255)

                                                                                  ccccGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATc      <  2:7467386/92‑1 (MQ=255)

                                                                                  aCCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTTCGCCCTTTGGTCATCGGCAAACAGCACGGTATTATGTTTAtt      >  2:7115001/1‑92 (MQ=255)

                                                                                  aCCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATc      >  2:923798/1‑93 (MQ=255)

                                                                                  aCCCGCCGCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGGTTGCGCCCTTTGGTGATCGGCCAACAACACGTTATTATGTTTAtt      >  2:41542/1‑92 (MQ=255)

                                                                                    ccgccgCCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCaa    <  2:1836086/93‑1 (MQ=255)

                                                                                      gccgccTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCaaaa  <  1:1615446/93‑1 (MQ=255)

                                                                                      gccgccTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCaaaa  <  1:1566988/93‑1 (MQ=255)

                                                                                      gccgccTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTACGTTGATCaaaa  <  2:7802460/93‑1 (MQ=255)

                                                                                      gccgccTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGCTTGCGCCTTTGGGGCATCAGCAAACAGCACGGTATTATGTTGATCaaca  >  1:4236675/1‑91 (MQ=255)

CGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTCGGTAATAAAGATGCTGTTGAAGGTCACATCCGCCATCGTGCCACCCGCCGTCTCGATCACCTTGCGGATAGTTTCCAGAACGTGGCGGGTTTGCGCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAA  >  NC_000913/1071100‑1071278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`