BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,087,656	A→G	D475D (GAT→GAC)	ycdR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,087,656	0	A	G	99.6%	752.6 / NA	237	D475D (GAT→GAC)	ycdR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (104/132); total (105/132)
Fisher's exact test for biased strand distribution p-value = 4.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 242 total aligned reads displayed.

CTGTTTAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCATCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCAAC  >  NC_000913/1087566‑1087745

cTGTTTAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTc                                                                                         >  1:3860591/1‑93 (MQ=255)

cTGTTTAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTc                                                                                         >  1:2674596/1‑93 (MQ=255)

cTGTTTAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGCGCACTGGCGTc                                                                                         >  2:3308201/1‑93 (MQ=255)

   tttAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTc                                                                                      >  2:7266683/1‑93 (MQ=255)

     tAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCAt                                                                                    <  1:6033859/93‑1 (MQ=255)

     tAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCAt                                                                                    <  2:7447464/93‑1 (MQ=255)

       aaTTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATaa                                                                                  <  1:4683080/93‑1 (MQ=255)

       aaTTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATaa                                                                                  <  2:3510517/93‑1 (MQ=255)

         ttGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATc                                                                                >  2:6340613/1‑93 (MQ=255)

         ttGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATc                                                                                <  1:1791080/93‑1 (MQ=255)

          tGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCt                                                                               <  2:182488/93‑1 (MQ=255)

           gCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTg                                                                              >  2:2775748/1‑93 (MQ=255)

           gCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTg                                                                              >  2:1461684/1‑93 (MQ=255)

             tCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaa                                                                            >  1:5759909/1‑93 (MQ=255)

             tCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaa                                                                            >  1:769041/1‑93 (MQ=255)

              ccGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaa                                                                           <  1:4534774/93‑1 (MQ=255)

               cGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaag                                                                          >  2:3972737/1‑93 (MQ=255)

               cGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaag                                                                          <  2:6103612/93‑1 (MQ=255)

                gggTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagc                                                                         <  2:4321185/93‑1 (MQ=255)

                gggTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagc                                                                         <  1:6515761/93‑1 (MQ=255)

                  gTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagcaa                                                                       <  2:7658481/93‑1 (MQ=255)

                  gTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagcaa                                                                       <  2:6548940/93‑1 (MQ=255)

                  gTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagcaa                                                                       >  2:5896071/1‑93 (MQ=255)

                    tttGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagcaaag                                                                     <  1:850350/93‑1 (MQ=255)

                    tttGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGaaagcaaag                                                                     <  2:5061439/93‑1 (MQ=255)

                      tGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAaagcaaagca                                                                   <  1:1662778/93‑1 (MQ=255)

                      tGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAaagcaaagca                                                                   >  1:3653222/1‑93 (MQ=255)

                        tCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGcatc                                                                 <  1:4172480/93‑1 (MQ=255)

                        tCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGcatc                                                                 >  1:3412590/1‑93 (MQ=255)

                         cGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGcatca                                                                <  1:6169647/93‑1 (MQ=255)

                          gAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGcatcat                                                               <  1:6426472/93‑1 (MQ=255)

                           aaTTTCGCTCAGCCTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCatcatc                                                              <  1:5658335/93‑1 (MQ=255)

                           aaTTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCatcatc                                                              <  1:5826031/93‑1 (MQ=255)

                             tttCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGt                                                            <  1:3362957/93‑1 (MQ=255)

                                cGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGa                                                         <  2:2109402/93‑1 (MQ=255)

                                  cTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAAc                                                       >  2:6896980/1‑93 (MQ=255)

                                   tCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACa                                                      >  1:7221190/1‑93 (MQ=255)

                                   tCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACa                                                      >  1:1752669/1‑93 (MQ=255)

                                      gACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAata                                                   <  1:5493473/93‑1 (MQ=255)

                                      gACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAata                                                   <  2:4828721/93‑1 (MQ=255)

                                      gACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAata                                                   <  2:2203540/93‑1 (MQ=255)

                                      gACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAata                                                   >  1:998333/1‑93 (MQ=255)

                                      aaCTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAata                                                   <  1:1174698/92‑1 (MQ=255)

                                        cTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATg                                                 >  2:6198017/1‑93 (MQ=255)

                                          cccGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGcc                                               <  2:7010651/93‑1 (MQ=255)

                                           ccGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCa                                              >  1:5190776/1‑93 (MQ=255)

                                           ccGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCa                                              <  2:1060009/93‑1 (MQ=255)

                                             gCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATc                                            >  2:7380628/1‑93 (MQ=255)

                                             gCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATc                                            <  1:4858278/93‑1 (MQ=255)

                                              cTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCa                                           >  1:7421871/1‑93 (MQ=255)

                                               tAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCaa                                          >  2:3952517/1‑93 (MQ=255)

                                                 aaGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCaaaa                                        <  2:3781466/93‑1 (MQ=255)

                                                    ccTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagca                                     <  2:3589183/93‑1 (MQ=255)

                                                    ccTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagca                                     <  1:2236734/93‑1 (MQ=255)

                                                    ccTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagca                                     <  2:4860769/93‑1 (MQ=255)

                                                     cTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcag                                    <  2:4611336/93‑1 (MQ=255)

                                                     cTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcag                                    >  1:2882923/1‑93 (MQ=255)

                                                     cTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcag                                    <  2:5371528/93‑1 (MQ=255)

                                                      tgcttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcagc                                   >  1:3278040/1‑93 (MQ=255)

                                                      tgcttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcagc                                   >  1:5845170/1‑93 (MQ=255)

                                                      tgcttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcagc                                   >  1:1849815/1‑93 (MQ=255)

                                                      tgcttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAagcagc                                   >  1:750383/1‑93 (MQ=255)

                                                        cttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCAt                                 >  1:6861684/1‑93 (MQ=255)

                                                         ttgctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATg                                >  1:7114742/1‑93 (MQ=255)

                                                           gctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTc                              <  1:4907876/93‑1 (MQ=255)

                                                           gctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTc                              <  2:1919732/93‑1 (MQ=255)

                                                           gctGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCACGTc                              <  1:5967325/93‑1 (MQ=255)

                                                             tGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCg                            <  1:5260816/93‑1 (MQ=255)

                                                             tGATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCg                            >  1:6886339/1‑93 (MQ=255)

                                                              gATAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCgg                           >  2:7883658/1‑93 (MQ=255)

                                                                tAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCa                         >  2:2461805/1‑93 (MQ=255)

                                                                tAAGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCa                         >  1:3459480/1‑93 (MQ=255)

                                                                 aaGCCGTGATAGCCGGTGCCCTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCaa                        <  2:6798491/93‑1 (MQ=255)

                                                                 aaGCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCaa                        >  1:3083087/1‑93 (MQ=255)

                                                                   gCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGa                      >  2:6640834/1‑93 (MQ=255)

                                                                   gCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGa                      >  1:3605010/1‑93 (MQ=255)

                                                                   gCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGa                      <  1:1282752/93‑1 (MQ=255)

                                                                   gCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGa                      >  2:4974824/1‑93 (MQ=255)

                                                                   gCCGTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGa                      <  1:2560754/93‑1 (MQ=255)

                                                                      gTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCt                   <  2:1609089/93‑1 (MQ=255)

                                                                      gTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCt                   <  2:5783626/93‑1 (MQ=255)

                                                                      gTGATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCt                   >  2:4025679/1‑93 (MQ=255)

                                                                        gATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTc                 <  2:3751438/93‑1 (MQ=255)

                                                                        gATAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTc                 <  1:400593/93‑1 (MQ=255)

                                                                          tAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCat               <  2:7817540/93‑1 (MQ=255)

                                                                          tAGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCat               >  1:5516892/1‑93 (MQ=255)

                                                                           aGCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCACAAGCAGCATGTCCGGCAAGATCTTCata              >  1:7389615/1‑93 (MQ=255)

                                                                            gCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCatat             <  1:4273981/93‑1 (MQ=255)

                                                                            gCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCatat             <  1:2715074/93‑1 (MQ=255)

                                                                            gCCGGTGCACTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCatat             >  1:1229248/1‑93 (MQ=255)

                                                                                gTGCGCTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACa         <  2:6457382/93‑1 (MQ=255)

                                                                                gTGCACTGGCGTCTTCATAATCTCAAAGCAAAGCATCATCGTGGAACAATATGCCATCACAAGCAGCATGTCCCGCACGATCTTCAtatacgc         >  1:209547/1‑90 (MQ=255)

                                                                                     cTGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCa    >  1:2456402/1‑93 (MQ=255)

                                                                                      tGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCaa   >  2:2996629/1‑93 (MQ=255)

                                                                                      tGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCaa   >  2:1233786/1‑93 (MQ=255)

                                                                                      tGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCaa   >  1:4683048/1‑93 (MQ=255)

                                                                                      tGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCaa   >  1:4063276/1‑93 (MQ=255)

                                                                                      tGGCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCaa   <  1:1429009/93‑1 (MQ=255)

                                                                                       ggCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCAAc  <  2:6727308/93‑1 (MQ=255)

                                                                                       ggCGTCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCAAc  <  1:384392/93‑1 (MQ=255)

CTGTTTAAATTGCTCCGGGTTTTGTCGAATTTCGCTCAGACTCCCGCTAAAGCCTGCTTGCTGATAAGCCGTGATAGCCGGTGCACTGGCATCTTCATAATCTGAAAGCAAAGCATCATCGTGGAACAATATGCCATCAAAAGCAGCATGTCCGGCAAGATCTTCATATAACATGCCAAC  >  NC_000913/1087566‑1087745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`