BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,091,304	T→C	D70G (GAC→GGC)	ycdS ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,091,304	0	T	C	100.0%	714.1 / NA	224	D70G (GAC→GGC)	ycdS	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (94/130); total (94/130)

Only 100 of 234 total aligned reads displayed.

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

ccACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCa                                                                                         <  1:3041895/93‑1 (MQ=255)

  aCGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACcagccagc                                                                                       >  1:6063054/1‑93 (MQ=255)

  aCGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACcagccagc                                                                                       <  1:3103310/93‑1 (MQ=255)

   cgcgCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCa                                                                                      <  2:7714467/93‑1 (MQ=255)

   cgcgCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCa                                                                                      >  1:7806444/1‑93 (MQ=255)

    gcgcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCaa                                                                                     <  1:3591366/93‑1 (MQ=255)

    gcgcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCaa                                                                                     >  1:3561206/1‑93 (MQ=255)

      gcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAtt                                                                                   <  2:3602913/93‑1 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  >  1:4524468/1‑93 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  <  2:2747990/93‑1 (MQ=255)

       cTGGTAATTGCTGATGACGATAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGTCCCATAAGTCAATCTTTAACCAGCCAGCAAttt                                                                                  <  2:5003328/93‑1 (MQ=255)

        tGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTg                                                                                 <  2:1710663/93‑1 (MQ=255)

        tGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTg                                                                                 <  2:1971917/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  1:7696387/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  2:2123215/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             >  1:3703934/1‑93 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  2:3841133/93‑1 (MQ=255)

             aTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAt                                                                            <  2:6185701/93‑1 (MQ=255)

               tGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTg                                                                          <  2:471809/93‑1 (MQ=255)

               tGCTGAGGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTg                                                                          <  1:2471775/93‑1 (MQ=255)

                 cTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCt                                                                        >  1:6391046/1‑93 (MQ=255)

                  tgatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTg                                                                       >  1:2447256/1‑93 (MQ=255)

                  tgatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTg                                                                       >  2:5939716/1‑93 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      <  2:4241167/93‑1 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      <  1:3260970/93‑1 (MQ=255)

                    atgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAg                                                                     <  2:2682088/93‑1 (MQ=255)

                     tgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAgg                                                                    >  1:4850081/1‑92 (MQ=255)

                      gaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTg                                                                   <  2:1332074/93‑1 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               <  2:1694074/93‑1 (MQ=255)

                            aGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtt                                                             <  2:4572221/93‑1 (MQ=255)

                            aGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtt                                                             <  1:585501/93‑1 (MQ=255)

                             gCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAttt                                                            >  2:7701878/1‑93 (MQ=255)

                               ggTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTa                                                          >  2:1381457/1‑93 (MQ=255)

                               ggTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTa                                                          <  1:6285689/93‑1 (MQ=255)

                               ggTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTa                                                          <  1:6018214/93‑1 (MQ=255)

                               ggTTGTAAACGGTAATAACATGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTa                                                          <  1:7209424/93‑1 (MQ=255)

                                gTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTTAGTGCTGATTTTAg                                                         >  1:3473569/1‑93 (MQ=255)

                                gTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAg                                                         >  2:62710/1‑93 (MQ=255)

                                  tGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTg                                                       >  2:7226413/1‑93 (MQ=255)

                                   gTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGc                                                      <  1:7764133/93‑1 (MQ=255)

                                   gTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGc                                                      <  1:713638/93‑1 (MQ=255)

                                    tAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCa                                                     >  1:5417923/1‑93 (MQ=255)

                                     aaaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCaa                                                    <  2:2979833/93‑1 (MQ=255)

                                      aaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGTTTTTAGTGCaaa                                                   >  2:2367969/1‑93 (MQ=255)

                                      aaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCaaa                                                   >  2:2177331/1‑93 (MQ=255)

                                       aCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAc                                                  >  2:3552598/1‑93 (MQ=255)

                                         ggTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCa                                                <  2:4947403/93‑1 (MQ=255)

                                          gTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAt                                               >  1:7474680/1‑93 (MQ=255)

                                          gTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAt                                               <  1:3776780/93‑1 (MQ=255)

                                           taataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATg                                              <  2:2587477/93‑1 (MQ=255)

                                           taataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATg                                              <  1:4291251/93‑1 (MQ=255)

                                           gaataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATg                                              <  1:120329/92‑1 (MQ=255)

                                            aataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGa                                             <  2:6391045/93‑1 (MQ=255)

                                              taaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACa                                           >  1:1737085/1‑93 (MQ=255)

                                              taaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACa                                           >  1:1884538/1‑93 (MQ=255)

                                              taaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACa                                           >  2:515386/1‑93 (MQ=255)

                                              taaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACa                                           <  1:1452900/93‑1 (MQ=255)

                                               aaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaa                                          <  2:6093219/93‑1 (MQ=255)

                                                aCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaaa                                         >  2:7909049/1‑93 (MQ=255)

                                                aCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaaa                                         >  1:5158558/1‑93 (MQ=255)

                                                 ccTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAg                                        >  1:1656473/1‑93 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       >  1:1862236/1‑93 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       >  1:4429089/1‑93 (MQ=255)

                                                    gTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctg                                     <  2:6602839/93‑1 (MQ=255)

                                                     tttATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctgg                                    <  2:1242880/93‑1 (MQ=255)

                                                     tttATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctgg                                    >  1:2292343/1‑93 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggct                                  <  1:3865586/93‑1 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggct                                  <  2:5306975/93‑1 (MQ=255)

                                                        aTCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggctg                                 >  2:3794374/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  1:1574584/93‑1 (MQ=255)

                                                           ttGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGt                              >  1:5691712/1‑93 (MQ=255)

                                                           ttGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGt                              >  2:4508059/1‑93 (MQ=255)

                                                            tGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTa                             <  2:5646355/93‑1 (MQ=255)

                                                             gCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAt                            <  1:3882720/93‑1 (MQ=255)

                                                             gCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAt                            <  1:5055972/93‑1 (MQ=255)

                                                             gCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAt                            >  2:544503/1‑93 (MQ=255)

                                                               ccGGCCCATAAGGCAATCTGTAAGCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTa                          <  1:1523109/93‑1 (MQ=255)

                                                                 ggCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAcc                        <  1:3920252/93‑1 (MQ=255)

                                                                  gCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAccc                       >  2:3571158/1‑93 (MQ=255)

                                                                   cccATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCt                      <  1:2005220/93‑1 (MQ=255)

                                                                   cccATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCt                      <  1:6700529/93‑1 (MQ=255)

                                                                    ccATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTCCCCtt                     <  1:4943750/93‑1 (MQ=255)

                                                                     cATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTg                    <  1:531956/93‑1 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  2:7829076/1‑93 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGa                 <  1:874644/93‑1 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGa                 >  2:7460478/1‑93 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTGATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGa                 <  1:7269998/93‑1 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAg                >  2:6978762/1‑93 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAg                >  2:4647765/1‑93 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            >  1:4063745/1‑93 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            >  2:2473103/1‑93 (MQ=255)

                                                                              aTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCa           >  1:7157612/1‑93 (MQ=255)

                                                                                cTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaat         <  2:6899204/93‑1 (MQ=255)

                                                                                cTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaat         <  2:1851453/93‑1 (MQ=255)

                                                                                 tGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaata        <  2:1496939/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaatac       >  1:4687800/1‑92 (MQ=255)

                                                                                   tAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataat      >  1:4651876/1‑93 (MQ=255)

                                                                                     aCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCa    >  2:3997733/1‑93 (MQ=255)

                                                                                      ccagccagCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCaa   <  2:5015231/93‑1 (MQ=255)

                                                                                       cagccagcAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAt  <  2:1211714/93‑1 (MQ=255)

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`