BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,126,600	A→G	D191G (GAC→GGC)	mviM →	putative virulence factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,126,600	0	A	G	100.0%	550.9 / NA	178	D191G (GAC→GGC)	mviM	putative virulence factor
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/81); total (97/81)

Only 100 of 189 total aligned reads displayed.

TGCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAGC  >  NC_000913/1126510‑1126689

tGCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAacggcg                                                                                         >  2:7118062/1‑93 (MQ=255)

 gCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGgcgc                                                                                        >  1:6926238/1‑93 (MQ=255)

 gCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGgcgc                                                                                        <  2:733978/93‑1 (MQ=255)

  cTGGATGATTATCTGCTTGTGGTGGATGCCGCACTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCt                                                                                       <  1:4706469/93‑1 (MQ=255)

  cTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCt                                                                                       <  2:848297/93‑1 (MQ=255)

  cTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCt                                                                                       <  2:6916226/93‑1 (MQ=255)

    ggATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTgg                                                                                     <  1:4889914/93‑1 (MQ=255)

    ggATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTgg                                                                                     >  2:519071/1‑93 (MQ=255)

    ggATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTgg                                                                                     >  2:4689982/1‑93 (MQ=255)

     gatgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGc                                                                                    >  1:5836319/1‑93 (MQ=255)

       tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                  >  1:6241293/1‑93 (MQ=255)

       tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                  >  1:6241291/1‑93 (MQ=255)

       tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                  <  2:5885210/93‑1 (MQ=255)

       tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                  >  1:477982/1‑93 (MQ=255)

         atTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGaaa                                                                                <  2:5663525/93‑1 (MQ=255)

          ttATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAAt                                                                               >  2:473776/1‑93 (MQ=255)

            aTCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGc                                                                             <  2:2591716/93‑1 (MQ=255)

             tCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCGTCTCTGGATGGCGGGACGCTACTGACTAACGGCGCTGGCGAAATGCt                                                                            >  2:7894482/1‑93 (MQ=255)

             tCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCt                                                                            >  2:7228182/1‑93 (MQ=255)

             tCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCt                                                                            >  2:361388/1‑93 (MQ=255)

                tcATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGtt                                                                         <  2:7918120/92‑1 (MQ=255)

                gCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGtt                                                                         <  2:2161529/93‑1 (MQ=255)

                gCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGtt                                                                         <  1:5134865/93‑1 (MQ=255)

                 cATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGttt                                                                        >  2:379572/1‑93 (MQ=255)

                  aTGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTg                                                                       >  1:6126825/1‑93 (MQ=255)

                   tgtgGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGc                                                                      >  1:7340618/1‑93 (MQ=255)

                   tgtgGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGc                                                                      >  1:3078333/1‑93 (MQ=255)

                    gtggtgGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGcg                                                                     >  2:577747/1‑92 (MQ=255)

                    gtggtgGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGcc                                                                     <  2:4243310/93‑1 (MQ=255)

                      ggtggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGa                                                                   <  1:1060852/93‑1 (MQ=255)

                      ggtggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGa                                                                   <  2:392310/93‑1 (MQ=255)

                        tggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGGGc                                                                 >  1:2681036/1‑93 (MQ=255)

                          gATACCGCGCTGTGGTTGTCGGGCGGAAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCAc                                                               >  2:2509192/1‑93 (MQ=255)

                             aCCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAt                                                            <  1:3158817/93‑1 (MQ=255)

                             aCCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAt                                                            <  1:7753635/93‑1 (MQ=255)

                               cgcgCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAttt                                                          <  1:1696853/93‑1 (MQ=255)

                               cgcgCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAttt                                                          <  2:6109080/93‑1 (MQ=255)

                               cgcgCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAttt                                                          >  1:6751313/1‑93 (MQ=255)

                               cgcgCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAttt                                                          >  1:6331033/1‑93 (MQ=255)

                                 cgcTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAttttt                                                        <  2:1312978/93‑1 (MQ=255)

                                   cTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCg                                                      >  2:6325915/1‑93 (MQ=255)

                                   cTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCg                                                      >  2:7847498/1‑93 (MQ=255)

                                    tgtgGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCgg                                                     >  2:2910492/1‑93 (MQ=255)

                                    tgtgGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCgg                                                     >  2:543938/1‑93 (MQ=255)

                                        gTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTgg                                                 >  1:4443570/1‑93 (MQ=255)

                                         ttGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGt                                                >  2:5006219/1‑93 (MQ=255)

                                          tGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTc                                               <  2:1998920/93‑1 (MQ=255)

                                              gggCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCttt                                           <  2:749615/93‑1 (MQ=255)

                                              gggCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCttt                                           <  2:7263845/93‑1 (MQ=255)

                                              gggCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCttt                                           <  1:5237329/93‑1 (MQ=255)

                                               ggcggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTg                                          >  2:6900922/1‑93 (MQ=255)

                                                gcggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGc                                         <  1:6050655/93‑1 (MQ=255)

                                                 cggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCa                                        <  2:1824613/93‑1 (MQ=255)

                                                 cggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCa                                        <  2:5481753/93‑1 (MQ=255)

                                                    gaaaGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGAt                                     <  2:5315987/92‑1 (MQ=255)

                                                     aaaGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATc                                    <  1:5875393/93‑1 (MQ=255)

                                                     aaaGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATc                                    >  2:3744191/1‑93 (MQ=255)

                                                       aGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcac                                  >  1:1464721/1‑93 (MQ=255)

                                                       aGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcac                                  <  2:2991631/93‑1 (MQ=255)

                                                        gCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacc                                 >  1:1289092/1‑93 (MQ=255)

                                                         ccTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacca                                <  1:2169256/93‑1 (MQ=255)

                                                          ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                               >  1:4444516/1‑93 (MQ=255)

                                                          ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                               <  2:6232754/93‑1 (MQ=255)

                                                          ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGGCCTTTGCAGATcaccac                               >  2:1607946/1‑93 (MQ=255)

                                                           tctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCaccacc                              >  1:5652210/1‑93 (MQ=255)

                                                            ctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCt                             >  2:3621090/1‑93 (MQ=255)

                                                            ctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCt                             <  1:6816141/93‑1 (MQ=255)

                                                             tctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTg                            >  1:2677780/1‑93 (MQ=255)

                                                               tGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTa                          <  1:6026074/93‑1 (MQ=255)

                                                               tGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTa                          <  2:7490309/93‑1 (MQ=255)

                                                               tGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTa                          <  1:4227083/93‑1 (MQ=255)

                                                                  aTGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGc                       <  1:5464632/93‑1 (MQ=255)

                                                                   tGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCa                      >  1:1644959/1‑93 (MQ=255)

                                                                   tGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCa                      >  2:5068297/1‑93 (MQ=255)

                                                                   tGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCa                      <  2:6379642/93‑1 (MQ=255)

                                                                    ggCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCAt                     <  2:4179171/93‑1 (MQ=255)

                                                                    ggCGGTACGCCACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCAt                     <  1:10656/93‑1 (MQ=255)

                                                                     gCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATc                    <  1:2450763/93‑1 (MQ=255)

                                                                       ggTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGc                  <  1:4334796/93‑1 (MQ=255)

                                                                       ggTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGc                  <  2:2114456/93‑1 (MQ=255)

                                                                       ggTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCATTTGCAGATCACCACCTGTATGCCTCGc                  >  1:2371391/1‑93 (MQ=255)

                                                                        gTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGcc                 >  1:6231984/1‑93 (MQ=255)

                                                                              tACTGATTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCGTTTTATTTCACCATCTGTATGCATCGCCGTGCCg           >  2:7251398/1‑93 (MQ=255)

                                                                              tACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCg           >  2:3416519/1‑93 (MQ=255)

                                                                               aCTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCgg          >  1:79995/1‑93 (MQ=255)

                                                                               aCTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCgg          >  2:6328230/1‑93 (MQ=255)

                                                                               aCTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCgg          >  2:6846730/1‑93 (MQ=255)

                                                                                cTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGa         <  1:5809413/93‑1 (MQ=255)

                                                                                cTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGa         >  2:7400459/1‑93 (MQ=255)

                                                                                 tGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGaa        <  2:4861014/93‑1 (MQ=255)

                                                                                    cTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTc     >  1:2974458/1‑93 (MQ=255)

                                                                                    cTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTc     >  1:374660/1‑93 (MQ=255)

                                                                                     tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCa    <  2:6980905/93‑1 (MQ=255)

                                                                                     tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCa    >  1:6602249/1‑93 (MQ=255)

                                                                                     tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCa    <  2:3572266/93‑1 (MQ=255)

                                                                                     tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCa    <  1:4009241/93‑1 (MQ=255)

                                                                                      aaCGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAg   >  2:2190918/1‑93 (MQ=255)

                                                                                      aaCGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAg   >  1:7658981/1‑93 (MQ=255)

                                                                                       acggcgCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAGc  <  1:5588548/93‑1 (MQ=255)

                                                                                       acggcgCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGCAAGTCAGc  >  1:6207750/1‑93 (MQ=255)

TGCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAGC  >  NC_000913/1126510‑1126689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`