BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,137,414	A→G	D274G (GAC→GGC)	flgJ →	FlgJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,137,414	0	A	G	100.0%	594.1 / NA	192	D274G (GAC→GGC)	flgJ	FlgJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (88/104); total (88/104)

Only 100 of 203 total aligned reads displayed.

GGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAA  >  NC_000913/1137325‑1137503

ggATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGgcgc                                                                                        <  1:4271727/93‑1 (MQ=255)

 gATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGAAGGACCTACGGGGcgcg                                                                                       >  1:6413721/1‑93 (MQ=255)

 gATTACGTTGGAATATTAACAAGTAACCCAAGCTACGCCGCCGTGACGCCCGAAACGAGTGAGGAACAGGGGACGCAGGAAATACAGGGcgcg                                                                                       <  1:7000759/93‑1 (MQ=255)

  aTTACGTTGGTCTTTAAACGCGTAACACGCGCTGCGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACACGGcgcgc                                                                                      <  2:4798635/93‑2 (MQ=255)

  aTTACGTTGGGCTGTTAACGCGTACCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCgg                                                                                      <  2:4525548/93‑1 (MQ=255)

  aTTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCgg                                                                                      >  1:5301301/1‑93 (MQ=255)

   ttACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCggg                                                                                     >  2:6920965/1‑93 (MQ=255)

    tACGTTGGGCTGTTAACGCGTAACCCGTGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGc                                                                                    >  2:828061/1‑93 (MQ=255)

     aCGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCt                                                                                   <  1:5178274/93‑1 (MQ=255)

      cGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTa                                                                                  <  1:5143213/93‑1 (MQ=255)

       gTTGGGCTGTTAACGCGTAACGCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTAt                                                                                 >  2:5013365/1‑93 (MQ=255)

       gTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTAt                                                                                 >  2:4471701/1‑93 (MQ=255)

           ggCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGccc                                                                             >  1:4419436/1‑92 (MQ=255)

            gCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCAc                                                                            <  2:174227/93‑1 (MQ=255)

            gCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCAc                                                                            <  1:1491570/93‑1 (MQ=255)

            gCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCAc                                                                            <  2:7390619/93‑1 (MQ=255)

             cTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCAcc                                                                           <  1:2741511/93‑1 (MQ=255)

              tGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCg                                                                          >  2:2641510/1‑93 (MQ=255)

              tGTTAACGCGAAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGCGCGGAACAGGCGGCGCCGGCACTCCAGGGCGCGGGACAGGCCACCg                                                                          >  2:5961366/1‑93 (MQ=255)

                ttAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGAt                                                                        <  1:1156604/93‑1 (MQ=255)

                ttAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACAGAt                                                                        >  1:784197/1‑93 (MQ=255)

                  aaCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATcc                                                                      <  1:7561587/93‑1 (MQ=255)

                  aaCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATcc                                                                      >  1:4882373/1‑93 (MQ=255)

                  aaCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATcc                                                                      >  1:1580923/1‑93 (MQ=255)

                   aCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCt                                                                     <  2:6347858/93‑1 (MQ=255)

                        taccccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTa                                                                <  2:2953767/90‑1 (MQ=255)

                        tAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACATGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTa                                                                <  2:4652540/93‑1 (MQ=255)

                          aCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTagg                                                              >  2:2586129/1‑91 (MQ=255)

                          aCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATg                                                              >  1:6687148/1‑93 (MQ=255)

                           cccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGGCCTACAGGGCGCGGGCGATGCCTCCGCTCCTCACTATGc                                                             >  2:5775779/1‑93 (MQ=255)

                           cccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGc                                                             >  1:4140695/1‑93 (MQ=255)

                           cccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGc                                                             >  1:6765304/1‑93 (MQ=255)

                             cgcgCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGccc                                                           >  1:1519662/1‑93 (MQ=255)

                              gcgcTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCg                                                          >  2:4588365/1‑93 (MQ=255)

                              gcgcTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCg                                                          >  1:3804900/1‑93 (MQ=255)

                               cgcTACGCCGCCGTGACGACCGCCGCGGGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGc                                                         >  2:7649877/1‑93 (MQ=255)

                                gcTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCa                                                        >  1:5642470/1‑93 (MQ=255)

                                 cTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCaa                                                       >  1:236304/1‑93 (MQ=255)

                                  tACGCCGCCGTGACGGCCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCaaa                                                      >  2:7822932/1‑93 (MQ=255)

                                  tACGCCGCCGTGACGCCCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCaaa                                                      <  2:6821757/93‑1 (MQ=255)

                                  tACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCaaa                                                      >  1:652687/1‑93 (MQ=255)

                                  tACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCaaa                                                      <  2:6312109/93‑1 (MQ=255)

                                     gccgccGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTc                                                   >  2:3300299/1‑93 (MQ=255)

                                     gccgccGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTc                                                   >  1:7463253/1‑93 (MQ=255)

                                     gccgccGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTc                                                   <  1:4570468/93‑1 (MQ=255)

                                        gccgTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCAcc                                                >  2:2069861/1‑93 (MQ=255)

                                        gccgTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGACCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCAcc                                                >  2:5366395/1‑93 (MQ=255)

                                         ccgTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCa                                               <  1:6480200/93‑1 (MQ=255)

                                         ccgTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCa                                               <  1:5623011/93‑1 (MQ=255)

                                           gTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAAc                                             <  2:6229353/93‑1 (MQ=255)

                                           gTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAAc                                             >  2:5887590/1‑93 (MQ=255)

                                            tGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAACATCACCAACa                                            >  1:2046580/1‑93 (MQ=255)

                                            tGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACa                                            <  1:7098047/93‑1 (MQ=255)

                                             gacgacCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACAt                                           <  2:1658670/93‑1 (MQ=255)

                                              acgacCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATg                                          <  1:3758171/93‑1 (MQ=255)

                                               cgcccgccgCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGa                                         <  2:316868/90‑1 (MQ=255)

                                               cgacCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGa                                         <  2:3700391/93‑1 (MQ=255)

                                                gacCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGAt                                        <  2:145763/93‑1 (MQ=255)

                                                  ccgccgCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTc                                      <  1:4801580/93‑1 (MQ=255)

                                                  ccgccgCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTc                                      <  2:7092165/93‑1 (MQ=255)

                                                   cgccgcGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTca                                     >  1:7577959/1‑93 (MQ=255)

                                                   cgccgcGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTca                                     <  2:3938437/93‑1 (MQ=255)

                                                    gccgcGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcag                                    >  2:3253303/1‑93 (MQ=255)

                                                      cgcgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagca                                  <  1:3379691/93‑1 (MQ=255)

                                                      cgcgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagca                                  <  2:4566413/93‑1 (MQ=255)

                                                      cgcgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTACGCCCGCAAACTCACCAACATGATTcagca                                  <  2:1777275/93‑1 (MQ=255)

                                                       gcgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagcag                                 <  2:5606010/93‑1 (MQ=255)

                                                       gcgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagcag                                 <  1:7879304/93‑1 (MQ=255)

                                                        cgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGa                                >  1:1788509/1‑93 (MQ=255)

                                                        cgAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTAACCAACATGATTCAGCAGa                                <  1:2193591/93‑1 (MQ=255)

                                                         gAGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGAt                               <  1:879187/93‑1 (MQ=255)

                                                          aGTGCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGAta                              >  1:7169550/1‑92 (MQ=255)

                                                            ggCGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGaa                            <  1:5579825/92‑1 (MQ=255)

                                                              cGGAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAAt                          <  2:111423/93‑1 (MQ=255)

                                                               ggAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATc                         >  1:164201/1‑93 (MQ=255)

                                                               gcaaCAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATc                         >  2:4413813/3‑93 (MQ=255)

                                                                gAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCg                        >  2:5711177/1‑93 (MQ=255)

                                                                gAACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCg                        <  2:7247469/93‑1 (MQ=255)

                                                                 aaCAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGa                       <  1:5616805/93‑1 (MQ=255)

                                                                  aCAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGAt                      >  2:4325438/1‑93 (MQ=255)

                                                                    aGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa                    <  1:7027044/93‑1 (MQ=255)

                                                                    aGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCAATaa                    >  2:2249086/1‑93 (MQ=255)

                                                                     gggggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAg                   >  1:2495467/1‑93 (MQ=255)

                                                                     gggggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAg                   >  2:7299582/1‑93 (MQ=255)

                                                                      ggggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGc                  <  2:6599006/93‑1 (MQ=255)

                                                                      ggggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGc                  <  2:6309215/93‑1 (MQ=255)

                                                                        ggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGa                <  1:1027434/93‑1 (MQ=255)

                                                                        ggCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGa                <  2:2106599/93‑1 (MQ=255)

                                                                            cAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAg            <  2:3429072/93‑1 (MQ=255)

                                                                             aGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAgg           <  2:1282812/93‑1 (MQ=255)

                                                                             aGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAgg           >  1:7524677/1‑93 (MQ=255)

                                                                              ggCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCGGCAAACTCACCAACATGATTCACCGGAGAAAATCGATAAGCGCCAgggg          >  1:4178143/1‑92 (MQ=255)

                                                                              ggCCCTACAGGGCGCGGGCTAGGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAggg          >  1:1388821/1‑92 (MQ=255)

                                                                               gCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTg         <  2:7213570/93‑1 (MQ=255)

                                                                               gCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTg         <  1:3082808/93‑1 (MQ=255)

                                                                                cccTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGa        <  1:3646880/93‑1 (MQ=255)

                                                                                cccTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGa        <  1:4045406/93‑1 (MQ=255)

                                                                                 ccTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAg       <  2:3964195/93‑1 (MQ=255)

                                                                                 ccTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAg       <  1:838274/93‑1 (MQ=255)

                                                                                     cAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCaaa   >  1:3560813/1‑93 (MQ=255)

GGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAA  >  NC_000913/1137325‑1137503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`