BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,138,203	A→G	Q201Q (CAA→CAG)	flgK →	hook‑filament junction protein 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,138,203	0	A	G	100.0%	718.0 / NA	224	Q201Q (CAA→CAG)	flgK	hook‑filament junction protein 1
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/114); total (110/114)

Only 100 of 227 total aligned reads displayed.

CTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAA  >  NC_000913/1138113‑1138292

cTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGcg                                                                                         >  2:1495332/1‑93 (MQ=255)

    gCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGAt                                                                                     <  2:4274648/93‑1 (MQ=255)

      tAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAAGAATCTGCTGGATCAGCGCGATCa                                                                                   >  2:4303444/1‑93 (MQ=255)

       aaaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCaa                                                                                  <  1:5279831/93‑1 (MQ=255)

        aaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAAc                                                                                 >  2:1569017/1‑93 (MQ=255)

        aaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAAc                                                                                 >  1:5356629/1‑93 (MQ=255)

         aCAAATTGCCAGCGTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt                                                                                <  2:3191755/93‑1 (MQ=255)

          cAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTg                                                                               <  2:6377043/93‑1 (MQ=255)

            aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt                                                                             <  1:6529466/93‑1 (MQ=255)

              ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGa                                                                           <  2:268003/93‑1 (MQ=255)

                gCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGc                                                                         >  2:6997570/1‑93 (MQ=255)

                    gCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAt                                                                     <  2:2277553/93‑1 (MQ=255)

                     ccTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAtt                                                                    <  1:6748621/93‑1 (MQ=255)

                      cTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTa                                                                   >  2:7766479/1‑93 (MQ=255)

                      cTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTa                                                                   <  1:6336153/93‑1 (MQ=255)

                       tGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaa                                                                  <  2:4469435/93‑1 (MQ=255)

                       tGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaa                                                                  >  1:4596208/1‑93 (MQ=255)

                       tGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGGTAGCGAAGTaa                                                                  >  1:1771653/1‑93 (MQ=255)

                        gAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaaa                                                                 <  1:2893690/93‑1 (MQ=255)

                        gAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaaa                                                                 <  1:2670548/93‑1 (MQ=255)

                        gAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaaa                                                                 <  2:6525748/93‑1 (MQ=255)

                        gAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaaa                                                                 >  1:1558855/1‑93 (MQ=255)

                         aaCGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAAc                                                                <  1:4756774/93‑1 (MQ=255)

                           cGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCa                                                              <  2:6476786/93‑1 (MQ=255)

                           cGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCa                                                              >  1:6897712/1‑93 (MQ=255)

                            gATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAg                                                             >  1:122428/1‑93 (MQ=255)

                             aTCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGa                                                            >  1:2270629/1‑93 (MQ=255)

                             aTCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGa                                                            >  1:867809/1‑93 (MQ=255)

                              tCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAt                                                           >  2:2495639/1‑93 (MQ=255)

                              tCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAt                                                           >  1:1307972/1‑93 (MQ=255)

                               cAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAtt                                                          <  2:2928409/93‑1 (MQ=255)

                               cAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAtt                                                          >  2:3162731/1‑93 (MQ=255)

                                 aaTCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgt                                                        >  1:5814903/1‑93 (MQ=255)

                                  aTCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgtt                                                       <  1:6679853/93‑1 (MQ=255)

                                   tctcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgttg                                                      >  2:261094/1‑93 (MQ=255)

                                     tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTggg                                                    >  2:6044310/1‑92 (MQ=255)

                                     tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    >  1:1954010/1‑93 (MQ=255)

                                     tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    >  1:3810206/1‑93 (MQ=255)

                                     tcGCGCATGGCAGGCGAGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    <  2:4512046/93‑1 (MQ=255)

                                        cgcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTa                                                 <  1:7169787/93‑1 (MQ=255)

                                         gcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAg                                                <  1:3034785/93‑1 (MQ=255)

                                           cagACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCGGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGaa                                              <  1:1816569/91‑1 (MQ=255)

                                           cTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGaa                                              >  2:1100678/1‑93 (MQ=255)

                                            tGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAg                                             >  2:577212/1‑93 (MQ=255)

                                            tGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAg                                             >  1:2173423/1‑93 (MQ=255)

                                               cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAGCTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          <  1:3057339/93‑1 (MQ=255)

                                               cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          >  2:3292041/1‑93 (MQ=255)

                                               cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          <  2:5134700/93‑1 (MQ=255)

                                                aGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAg                                         <  2:881203/93‑1 (MQ=255)

                                                 ggCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGc                                        <  1:5042945/93‑1 (MQ=255)

                                                  gCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCg                                       <  2:344691/93‑1 (MQ=255)

                                                   cGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGt                                      <  1:4753781/93‑1 (MQ=255)

                                                     tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    >  1:7592975/1‑93 (MQ=255)

                                                     tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    <  1:7399330/93‑1 (MQ=255)

                                                     tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    >  2:1583560/1‑93 (MQ=255)

                                                     tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    <  2:2102492/93‑1 (MQ=255)

                                                     tGGGGGCAGGGGCGTATCCAAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    <  1:7047665/93‑1 (MQ=255)

                                                     ggggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    <  2:5904472/92‑1 (MQ=255)

                                                      gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  2:4814458/93‑1 (MQ=255)

                                                      gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   >  1:3711142/1‑93 (MQ=255)

                                                      gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  1:340636/93‑1 (MQ=255)

                                                      gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  1:2973849/93‑1 (MQ=255)

                                                      gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  2:7247979/93‑1 (MQ=255)

                                                         ggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGa                                <  1:4082668/93‑1 (MQ=255)

                                                         ggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGa                                <  2:6897711/93‑1 (MQ=255)

                                                          gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCGGCGTTCAGGAt                               >  2:3864903/1‑93 (MQ=255)

                                                          gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGAt                               <  1:3117403/93‑1 (MQ=255)

                                                          gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGAt                               <  1:347807/93‑1 (MQ=255)

                                                             ggggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTAAGCGTTCAGGATggc                            >  1:5596303/1‑93 (MQ=255)

                                                              gggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggcg                           <  2:385557/93‑1 (MQ=255)

                                                                  gTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCAc                       >  1:2427229/1‑93 (MQ=255)

                                                                  gTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCAc                       >  1:3221073/1‑93 (MQ=255)

                                                                     aCCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta                    <  2:7877978/93‑1 (MQ=255)

                                                                       cTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtata                  >  2:4032529/1‑93 (MQ=255)

                                                                       cTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtata                  >  1:1080391/1‑93 (MQ=255)

                                                                       cTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtata                  >  1:4206769/1‑93 (MQ=255)

                                                                        tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 >  2:4078204/1‑93 (MQ=255)

                                                                        tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 >  1:329039/1‑93 (MQ=255)

                                                                        tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 >  1:5781590/1‑93 (MQ=255)

                                                                        tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 >  1:2612979/1‑93 (MQ=255)

                                                                        tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 <  1:3735503/93‑1 (MQ=255)

                                                                         aaCAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAAc                >  2:1282115/1‑93 (MQ=255)

                                                                           cAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACAt              >  1:5694584/1‑93 (MQ=255)

                                                                           cAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACAt              <  2:5232776/93‑1 (MQ=255)

                                                                            aaTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATc             <  2:2793665/93‑1 (MQ=255)

                                                                            aaTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATc             <  2:6064477/93‑1 (MQ=255)

                                                                            aaTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATc             >  2:7645508/1‑93 (MQ=255)

                                                                            aaTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATc             <  2:360097/93‑1 (MQ=255)

                                                                             aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            >  1:429292/1‑93 (MQ=255)

                                                                              tCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCAc           >  2:3673139/1‑93 (MQ=255)

                                                                               ctgctgGATCAGCGCGGTCAACTGGTGAGCGAATTAAACCAGACTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACg          <  1:3187911/93‑1 (MQ=255)

                                                                                tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa         >  2:7091404/1‑93 (MQ=255)

                                                                                tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa         <  2:5059814/93‑1 (MQ=255)

                                                                                 gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt        >  1:4243044/1‑93 (MQ=255)

                                                                                 gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt        >  2:7517574/1‑93 (MQ=255)

                                                                                 gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt        <  2:6345032/93‑1 (MQ=255)

                                                                                  ctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATg       <  2:5171410/93‑1 (MQ=255)

                                                                                   tgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGGAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACAACACGATgg      >  2:1513689/1‑93 (MQ=255)

                                                                                     gATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGcc    <  2:6244657/93‑1 (MQ=255)

                                                                                       tCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCaa  <  1:3512157/93‑1 (MQ=255)

CTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAA  >  NC_000913/1138113‑1138292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`