BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,147,973	T→C	intergenic (+59/‑9)	plsX → / → fabH	PlsX/3‑oxoacyl‑[acyl‑carrier‑protein] synthase III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,147,973	0	T	C	100.0%	699.5 / NA	219	intergenic (+59/‑9)	plsX/fabH	PlsX/3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/123); total (96/123)

Only 100 of 224 total aligned reads displayed.

TGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGAC  >  NC_000913/1147883‑1148062

tgGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGa                                                                                         >  2:7784459/1‑93 (MQ=255)

  gACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGc                                                                                       >  1:2637518/1‑93 (MQ=255)

  gACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGc                                                                                       >  2:401567/1‑93 (MQ=255)

  gACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGc                                                                                       >  2:3072766/1‑93 (MQ=255)

     ggTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTa                                                                                    <  2:6716330/93‑1 (MQ=255)

       tGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACa                                                                                  <  2:4552748/93‑1 (MQ=255)

         gCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATg                                                                                <  1:215281/93‑1 (MQ=255)

         gCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATg                                                                                >  1:7264405/1‑93 (MQ=255)

         gCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATg                                                                                <  1:6467203/93‑1 (MQ=255)

           aaaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGta                                                                              <  2:1936818/93‑1 (MQ=255)

           aaaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGta                                                                              <  2:2023029/93‑1 (MQ=255)

           aaaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGta                                                                              <  2:7498012/93‑1 (MQ=255)

            aaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGtat                                                                             >  2:1228594/1‑93 (MQ=255)

            aaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGtat                                                                             <  1:7362555/93‑1 (MQ=255)

              aGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATAc                                                                           <  2:4742469/93‑1 (MQ=255)

                cGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGa                                                                         <  2:1311954/93‑1 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        >  1:1355659/1‑93 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        <  1:1567856/93‑1 (MQ=255)

                  gAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAg                                                                       <  1:6232337/93‑1 (MQ=255)

                  gAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAg                                                                       >  2:4298783/1‑93 (MQ=255)

                   aaCTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGa                                                                      <  1:7084387/93‑1 (MQ=255)

                    aCTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATACCCGAAAAGTGACCGAGCGTACATGTATACGAAGat                                                                     <  2:6947641/93‑1 (MQ=255)

                      tctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatta                                                                   <  2:4960113/93‑1 (MQ=255)

                      tctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatta                                                                   >  2:5141123/1‑93 (MQ=255)

                      tctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatta                                                                   <  1:5322077/93‑1 (MQ=255)

                       ctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGattat                                                                  >  1:4168764/1‑93 (MQ=255)

                        tGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGattatt                                                                 <  1:5192357/93‑1 (MQ=255)

                         gCGGTAGCAGGTCGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTg                                                                <  1:1460137/93‑1 (MQ=255)

                          cGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTgg                                                               <  2:2388074/93‑1 (MQ=255)

                            gTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGtc                                                             >  1:2118420/1‑92 (MQ=255)

                            gTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTa                                                             <  1:5612468/93‑1 (MQ=255)

                            gTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTa                                                             <  1:3588266/93‑1 (MQ=255)

                            gTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTa                                                             <  1:6629685/93‑1 (MQ=255)

                              aGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACt                                                           <  2:3790297/93‑1 (MQ=255)

                              aGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACt                                                           >  2:1671087/1‑93 (MQ=255)

                              aGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACt                                                           <  1:3872362/93‑1 (MQ=255)

                              aGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGGATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTAGCACt                                                           >  1:4115198/1‑93 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          >  2:847252/1‑93 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          >  1:3051472/1‑93 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        <  2:7857452/93‑1 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        <  1:874164/93‑1 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        >  1:408507/1‑93 (MQ=255)

                                 aGGAAGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        >  2:5047636/1‑93 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       >  1:3274538/1‑93 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       >  1:2517771/1‑93 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       >  2:7174836/1‑93 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       >  1:7761623/1‑93 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       <  1:7864516/93‑1 (MQ=255)

                                   gACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAg                                                      <  1:3666182/93‑1 (MQ=255)

                                      gCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTa                                                   <  2:4904701/93‑1 (MQ=255)

                                       cTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTAt                                                  <  1:4894494/93‑1 (MQ=255)

                                        tGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATc                                                 <  1:1417874/93‑1 (MQ=255)

                                         gCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCt                                                <  1:1008095/93‑1 (MQ=255)

                                            aGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGcc                                             >  1:4226684/1‑93 (MQ=255)

                                             gCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGccc                                            <  2:4148957/93‑1 (MQ=255)

                                               gAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGa                                          <  1:90120/93‑1 (MQ=255)

                                               gAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGa                                          >  2:1355262/1‑93 (MQ=255)

                                                aaCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGaa                                         >  2:3444213/1‑93 (MQ=255)

                                                 aCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAAc                                        <  1:7427582/93‑1 (MQ=255)

                                                 aCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAAc                                        <  1:1173473/93‑1 (MQ=255)

                                                 aCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAAc                                        >  1:5889214/1‑93 (MQ=255)

                                                  cTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACa                                       <  2:7910817/93‑1 (MQ=255)

                                                   tCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACaa                                      >  1:1225397/1‑93 (MQ=255)

                                                    cGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAg                                     <  1:4992945/93‑1 (MQ=255)

                                                    cGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAg                                     >  2:3899211/1‑93 (MQ=255)

                                                    cGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAg                                     <  1:4469621/93‑1 (MQ=255)

                                                     gCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGt                                    <  1:1024596/93‑1 (MQ=255)

                                                     gCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGt                                    >  1:6120728/1‑93 (MQ=255)

                                                     gCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGt                                    >  1:3960950/1‑93 (MQ=255)

                                                     gCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGt                                    >  2:1633556/1‑93 (MQ=255)

                                                       aGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGc                                  <  1:4742604/93‑1 (MQ=255)

                                                         tttGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCgg                                <  2:2528823/93‑1 (MQ=255)

                                                          ttGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGa                               <  2:2853897/93‑1 (MQ=255)

                                                           tGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGAc                              <  1:4581031/93‑1 (MQ=255)

                                                           tGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGAc                              >  1:7042117/1‑93 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           <  2:5584588/93‑1 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           >  2:5755163/1‑93 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           <  1:6852584/93‑1 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           <  2:6336831/93‑1 (MQ=255)

                                                                gTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACg                         <  1:6881926/93‑1 (MQ=255)

                                                                 tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGc                        <  2:2318738/93‑1 (MQ=255)

                                                                  gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGcc                       <  2:3293240/93‑1 (MQ=255)

                                                                    cGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGa                     >  2:6553075/1‑93 (MQ=255)

                                                                      gTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGAtt                   >  1:1824032/1‑93 (MQ=255)

                                                                      gTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGAtt                   >  2:2205336/1‑93 (MQ=255)

                                                                       tatataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGACCGAACAAGTGCGGACAAAGGCCgcatt                  >  2:6644720/1‑89 (MQ=255)

                                                                        atataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTg                 <  2:5815101/93‑1 (MQ=255)

                                                                          ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGa               >  1:5683972/1‑93 (MQ=255)

                                                                          ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGa               <  1:4819212/93‑1 (MQ=255)

                                                                           taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaa              >  2:4484758/1‑93 (MQ=255)

                                                                           taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaa              >  2:6458936/1‑93 (MQ=255)

                                                                           taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGCTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaa              >  2:562238/1‑93 (MQ=255)

                                                                            aaCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaa             <  2:4223961/93‑1 (MQ=255)

                                                                             aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaa            >  1:5202698/1‑93 (MQ=255)

                                                                              ccGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaaa           >  1:6056418/1‑93 (MQ=255)

                                                                               cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaaaa          <  1:4364857/93‑1 (MQ=255)

                                                                               cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaaaa          <  2:3577871/93‑1 (MQ=255)

                                                                                  aaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGCTTTGGAAAAAAtgg       >  1:5143065/1‑93 (MQ=255)

                                                                                       gACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGac  <  1:7196291/93‑1 (MQ=255)

                                                                                       gACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGac  >  1:7499328/1‑93 (MQ=255)

TGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGAC  >  NC_000913/1147883‑1148062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`