BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,167,731	T→C	T109A (ACC→GCC)	ycfQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,167,731	0	T	C	99.5%	633.9 / ‑5.3	202	T109A (ACC→GCC)	ycfQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (79/122); total (79/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 207 total aligned reads displayed.

ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG  >  NC_000913/1167641‑1167820

 tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa                                                                                        <  2:1836616/93‑1 (MQ=255)

 tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa                                                                                        <  2:3180487/93‑1 (MQ=255)

   tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc                                                                                      <  1:1488774/93‑1 (MQ=255)

   tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc                                                                                      <  2:5209445/93‑1 (MQ=255)

   tCAACGTATGGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc                                                                                      <  2:7760093/93‑1 (MQ=255)

      aCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGt                                                                                   >  1:7859317/1‑93 (MQ=255)

      aCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGt                                                                                   <  2:5773318/93‑1 (MQ=255)

      aCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGt                                                                                   <  1:2200521/93‑1 (MQ=255)

       cGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCACGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGtt                                                                                  <  1:4063092/93‑1 (MQ=255)

       cGTATTGGCGAGATCTCCTGATGCTGGGGAGAGGGTGTTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGtt                                                                                  <  2:1004464/93‑1 (MQ=255)

        gTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTg                                                                                 >  1:7394157/1‑93 (MQ=255)

        gTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTg                                                                                 <  1:6737025/93‑1 (MQ=255)

         tATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTgg                                                                                >  2:3355837/1‑93 (MQ=255)

         tATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGGGTCTTTGCTGGCACAGCAGTTgg                                                                                >  1:5341447/1‑93 (MQ=255)

           ttGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCg                                                                              >  2:6210085/1‑93 (MQ=255)

            tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa                                                                             >  1:5722759/1‑93 (MQ=255)

            tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa                                                                             <  2:2459112/93‑1 (MQ=255)

            tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa                                                                             <  1:1003571/93‑1 (MQ=255)

            tGGCAATACCTCCTGAATCTGGTGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa                                                                             <  2:3996581/93‑1 (MQ=255)

             ggCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCATCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAt                                                                            <  1:3858630/93‑1 (MQ=255)

             ggCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAt                                                                            <  1:1867267/93‑1 (MQ=255)

                gATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgc                                                                         >  2:914368/1‑93 (MQ=255)

                gATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgc                                                                         >  1:6209887/1‑93 (MQ=255)

                gATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgc                                                                         <  1:6170369/93‑1 (MQ=255)

                gATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgc                                                                         >  1:21074/1‑93 (MQ=255)

                 atatCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgca                                                                        <  1:1641992/93‑1 (MQ=255)

                 atatCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgca                                                                        >  2:1775528/1‑93 (MQ=255)

                 atatCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgca                                                                        <  2:1272152/93‑1 (MQ=255)

                  tatCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcag                                                                       >  1:6926245/1‑93 (MQ=255)

                    tctcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCCAAGAAGTTGTCGCTGgcagca                                                                     >  1:1639805/1‑93 (MQ=255)

                    tctcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcagca                                                                     >  1:715736/1‑93 (MQ=255)

                    tctcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcagca                                                                     >  2:6475253/1‑93 (MQ=255)

                       ccTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaaaa                                                                  >  2:4509386/1‑93 (MQ=255)

                       ccTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaaaa                                                                  <  2:5851821/93‑1 (MQ=255)

                        cTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAAt                                                                 <  1:7324761/93‑1 (MQ=255)

                         tGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATa                                                                <  2:293201/93‑1 (MQ=255)

                         tGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATa                                                                <  2:511184/93‑1 (MQ=255)

                         tGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGGGTCTTTGCTGGCAAAGCGGTTGGCGATGGCAGCAAACTa                                                                >  1:2893742/1‑93 (MQ=255)

                           aaTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGt                                                              <  1:3491701/93‑1 (MQ=255)

                            aTCTGTGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGTTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTc                                                             <  2:1907556/93‑1 (MQ=255)

                            aTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTc                                                             <  2:486247/93‑1 (MQ=255)

                            aTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTc                                                             <  2:4711777/93‑1 (MQ=255)

                             tCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTca                                                            <  2:7281954/93‑1 (MQ=255)

                             tCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTca                                                            <  1:7733811/93‑1 (MQ=255)

                              cTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcag                                                           <  1:6851665/93‑1 (MQ=255)

                               tGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagc                                                          <  2:1514605/93‑1 (MQ=255)

                               tGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagc                                                          <  2:7625402/93‑1 (MQ=255)

                               tGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagc                                                          >  1:2366330/1‑93 (MQ=255)

                                ggggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcc                                                         <  2:3074600/93‑1 (MQ=255)

                                ggggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcc                                                         <  2:2732110/93‑1 (MQ=255)

                                ggggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcc                                                         <  1:3765011/93‑1 (MQ=255)

                                 gggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcca                                                        <  1:3385807/93‑1 (MQ=255)

                                  ggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagccag                                                       <  2:1171884/93‑1 (MQ=255)

                                  ggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagccag                                                       >  2:3527444/1‑93 (MQ=255)

                                    agagGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAgcg                                                     >  2:3366134/1‑93 (MQ=255)

                                    agagGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAgcg                                                     <  2:7869312/93‑1 (MQ=255)

                                     gagGGTGCTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAgcgc                                                    >  1:5119310/1‑93 (MQ=255)

                                      agGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCa                                                   <  2:6548006/93‑1 (MQ=255)

                                      agGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCa                                                   >  1:4809092/1‑93 (MQ=255)

                                       gggTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGGGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATCGTCAGCCCGCGCAg                                                  >  1:6546015/1‑93 (MQ=255)

                                         gtggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAc                                                <  1:4258376/93‑1 (MQ=255)

                                            gtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTcc                                             <  1:7424196/93‑1 (MQ=255)

                                             tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa                                            <  1:1303476/93‑1 (MQ=255)

                                             tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa                                            <  1:7083994/93‑1 (MQ=255)

                                             tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa                                            <  1:7451561/93‑1 (MQ=255)

                                                 gttgttGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCt                                        <  1:5633615/93‑1 (MQ=255)

                                                  ttgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtt                                       >  1:5437824/1‑93 (MQ=255)

                                                   tgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCttt                                      >  2:3446691/1‑93 (MQ=255)

                                                    gttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtttt                                     <  2:7032452/93‑1 (MQ=255)

                                                     ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc                                    <  1:4506911/93‑1 (MQ=255)

                                                     ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc                                    <  2:224217/93‑1 (MQ=255)

                                                     ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc                                    <  1:2572614/93‑1 (MQ=255)

                                                           aTGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTca                              <  1:4251431/93‑1 (MQ=255)

                                                               agcagcCTGTCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACaaa                          >  2:1924024/1‑93 (MQ=255)

                                                               agcagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACaaa                          >  1:3306073/1‑93 (MQ=255)

                                                                acagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACaaaa                         <  1:4831886/92‑1 (MQ=255)

                                                                   gcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAg                      >  2:4528784/1‑93 (MQ=255)

                                                                   gcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAg                      >  1:2241038/1‑93 (MQ=255)

                                                                   gcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAg                      <  1:1730178/93‑1 (MQ=255)

                                                                     cTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCt                    <  2:5272233/93‑1 (MQ=255)

                                                                      tGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtg                   <  2:3844032/93‑1 (MQ=255)

                                                                       gCCGGGGTGTCTTTGCTGGCAAGGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtgt                  <  2:4457477/93‑1 (MQ=255)

                                                                       gCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtgt                  <  2:5098858/93‑1 (MQ=255)

                                                                         cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc                >  2:2489206/1‑93 (MQ=255)

                                                                          ggggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCt               >  2:2935247/1‑93 (MQ=255)

                                                                          cgggTCTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCt               <  2:6085905/92‑1 (MQ=255)

                                                                           gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtt              >  1:4086719/1‑93 (MQ=255)

                                                                           gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtt              >  1:3047624/1‑93 (MQ=255)

                                                                           gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtt              >  1:86575/1‑93 (MQ=255)

                                                                             gtgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCa            >  2:5925959/1‑93 (MQ=255)

                                                                             gtgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCa            >  1:5570635/1‑93 (MQ=255)

                                                                             gtgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCa            <  2:7429353/93‑1 (MQ=255)

                                                                              tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt           >  1:5995379/1‑93 (MQ=255)

                                                                              tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt           >  2:3668426/1‑93 (MQ=255)

                                                                              tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt           <  2:7345425/93‑1 (MQ=255)

                                                                              tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt           <  2:74842/93‑1 (MQ=255)

                                                                                tCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGc         >  2:5041612/1‑93 (MQ=255)

                                                                                 cTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt        <  2:2060122/93‑1 (MQ=255)

                                                                                  tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt       >  1:1978889/1‑93 (MQ=255)

                                                                                     gCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGc    >  1:244441/1‑93 (MQ=255)

ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG  >  NC_000913/1167641‑1167820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`