BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,173,983	C→T	G136R (GGG→AGG)	ycfT ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,173,983	0	C	T	99.6%	821.6 / NA	228	G136R (GGG→AGG)	ycfT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (108/119); minor base A (0/1); total (108/120)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 234 total aligned reads displayed.

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

  aGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGc                                                                                       >  2:2122091/1‑93 (MQ=255)

  aGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGc                                                                                       >  2:5166480/1‑93 (MQ=255)

   gcgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCa                                                                                      >  1:424732/1‑93 (MQ=255)

   gcgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCa                                                                                      <  1:6175888/93‑1 (MQ=255)

    cgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTTGCGCTGGCGGTGGTCATCCTGTGCAg                                                                                     >  2:4712648/1‑93 (MQ=255)

    cgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAg                                                                                     <  2:2253027/93‑1 (MQ=255)

     gcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAgg                                                                                    >  2:1390805/1‑93 (MQ=255)

     gcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAga                                                                                    >  1:5457362/1‑92 (MQ=255)

       cAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGaa                                                                                  <  1:5565475/93‑1 (MQ=255)

       cAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGaa                                                                                  >  2:496202/1‑93 (MQ=255)

        aGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAAc                                                                                 <  2:5268636/93‑1 (MQ=255)

          aCGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTc                                                                               >  2:3314950/1‑93 (MQ=255)

           cGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCa                                                                              <  1:6908942/93‑1 (MQ=255)

           cGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCa                                                                              >  2:3222487/1‑93 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTTATCATCCTGTGCAGGAACTCAc                                                                             <  1:6591807/93‑1 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             >  1:5529734/1‑93 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             <  1:500542/93‑1 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             <  1:1003118/93‑1 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             >  2:2086262/1‑93 (MQ=255)

            ggCTAAAAATTTTACAAACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             <  1:7116305/93‑1 (MQ=255)

              cTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCg                                                                           <  2:7200816/93‑1 (MQ=255)

              cTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCg                                                                           >  2:1936477/1‑93 (MQ=255)

              cTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCg                                                                           >  2:5745497/1‑93 (MQ=255)

              cTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCg                                                                           <  1:5243611/93‑1 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          >  1:4060354/1‑93 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTCGTGCTCGCGGGGATCATCCTGTGCAGCAACTCACCgt                                                                          >  1:6584169/1‑92 (MQ=255)

                aaaaaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGt                                                                         <  2:2242115/93‑1 (MQ=255)

                 aaaaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTg                                                                        <  1:2374479/93‑1 (MQ=255)

                    aTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGaa                                                                     <  1:3556301/93‑1 (MQ=255)

                    aTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGaa                                                                     <  2:125391/93‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   >  2:6886252/1‑93 (MQ=255)

                        tACATACCATGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCgg                                                                 >  2:5241713/1‑93 (MQ=255)

                         aCATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGc                                                                >  1:1730621/1‑93 (MQ=255)

                          cATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCa                                                               <  2:7813903/93‑1 (MQ=255)

                          cATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCa                                                               <  1:6763968/93‑1 (MQ=255)

                          cATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCa                                                               <  2:268665/93‑1 (MQ=255)

                             aCCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGCATCGGCATaa                                                            >  2:3935732/1‑93 (MQ=255)

                             aCCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATaa                                                            <  2:2978459/93‑1 (MQ=255)

                              ccACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGTTGAAATCGGCATAAg                                                           <  2:3714168/93‑1 (MQ=255)

                                aCGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCg                                                         >  2:6725658/1‑93 (MQ=255)

                                aCGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCg                                                         <  2:7586862/93‑1 (MQ=255)

                                  gAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGc                                                       >  2:2909334/1‑93 (MQ=255)

                                    aaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAt                                                     <  1:4506502/93‑1 (MQ=255)

                                    aaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAt                                                     <  2:6235823/93‑1 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    <  2:4645600/93‑1 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    >  1:5280265/1‑93 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    <  1:3741034/93‑1 (MQ=255)

                                      tAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTg                                                   >  1:6436465/1‑93 (MQ=255)

                                      tAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTg                                                   >  1:6291758/1‑93 (MQ=255)

                                      tAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTg                                                   <  1:1152695/93‑1 (MQ=255)

                                       aGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTgg                                                  <  2:6467406/93‑1 (MQ=255)

                                        gACAATTACCGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 <  2:3122181/93‑1 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAg                                                >  1:1598398/1‑93 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGAATTGGAg                                                >  1:7705000/1‑93 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGGGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATAGGCATAAGCGGCATTGGAg                                                >  2:1555147/1‑93 (MQ=255)

                                          cAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAgg                                               >  2:4510139/1‑93 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              >  1:6007479/1‑93 (MQ=255)

                                            aTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCa                                             <  2:167129/93‑1 (MQ=255)

                                              tAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAtt                                           <  2:5447480/93‑1 (MQ=255)

                                               aaCGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTg                                          >  1:4835920/1‑93 (MQ=255)

                                                aCGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGc                                         <  1:1816745/93‑1 (MQ=255)

                                                     tACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  2:1112344/1‑93 (MQ=255)

                                                     tACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  1:1112152/1‑93 (MQ=255)

                                                     tACAGATACCACAAGCTGGAGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  2:677885/1‑93 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   >  2:3017028/1‑93 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   <  1:7412077/93‑1 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   <  2:6066551/93‑1 (MQ=255)

                                                       cAGATAGCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATc                                  <  2:5114217/93‑1 (MQ=255)

                                                       cAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATc                                  <  1:2642164/93‑1 (MQ=255)

                                                        aGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcg                                 >  1:5805512/1‑93 (MQ=255)

                                                        aGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcg                                 <  2:366743/93‑1 (MQ=255)

                                                        aGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcg                                 <  1:3293945/93‑1 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGTGGTGAACATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                <  1:4298259/93‑1 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGCGGTGATCCTCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                >  2:1460166/1‑93 (MQ=255)

                                                           tACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCgcgc                              >  1:7869973/1‑93 (MQ=255)

                                                             ccACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTc                            >  1:2547693/1‑93 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  2:6434594/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  1:3924806/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  1:5745498/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAGCGCGCTCa                           <  1:5390647/93‑1 (MQ=255)

                                                                caAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         >  1:5773318/1‑93 (MQ=255)

                                                                caAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         <  2:7069491/93‑1 (MQ=255)

                                                                aaaGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGTCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         <  2:4259036/92‑1 (MQ=255)

                                                                 aaGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGt                        <  2:5913037/93‑1 (MQ=255)

                                                                       gTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagc                  <  2:629744/93‑1 (MQ=255)

                                                                        tGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcc                 >  1:3137789/1‑93 (MQ=255)

                                                                         gCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcca                <  2:3066317/93‑1 (MQ=255)

                                                                          cTGGCGTTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCAc               <  2:3850715/93‑1 (MQ=255)

                                                                          cTGGCGGTGATCAGCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCAc               <  2:1151008/93‑1 (MQ=255)

                                                                           tGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACt              <  1:1576225/93‑1 (MQ=255)

                                                                             gCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTgg            <  2:7732153/93‑1 (MQ=255)

                                                                               ggTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGCGCCAGCCACTGGtt          <  2:3431642/93‑1 (MQ=255)

                                                                                gTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGCTc         >  2:6602416/1‑93 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        <  2:5680350/93‑1 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        >  2:2356010/1‑93 (MQ=255)

                                                                                   atcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGGGCTCAGGAGCCAGCCACTGGTTCAgc      >  1:1466390/1‑93 (MQ=255)

                                                                                   atcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgc      <  1:5166481/93‑1 (MQ=255)

                                                                                    tcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgcg     >  1:1565393/1‑93 (MQ=255)

                                                                                    tcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgcg     >  2:3495873/1‑93 (MQ=255)

                                                                                     catcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgcgc    >  2:1720388/1‑93 (MQ=255)

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`