BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,175,527	A→G	K293R (AAG→AGG)	ycfU →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,175,527	0	A	G	100.0%	782.7 / NA	248	K293R (AAG→AGG)	ycfU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/121); total (127/121)

Only 100 of 251 total aligned reads displayed.

AAAAAAATATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGG  >  NC_000913/1175437‑1175615

aaaaaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGc                                                                                        <  2:884420/93‑1 (MQ=255)

aaaaaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGc                                                                                        >  2:2643173/1‑93 (MQ=255)

 aaaaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCa                                                                                       <  2:5025704/93‑1 (MQ=255)

  aaaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAg                                                                                      <  1:714091/93‑1 (MQ=255)

   aaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAgg                                                                                     <  1:1002064/93‑1 (MQ=255)

   aaaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAgg                                                                                     >  1:4498660/1‑93 (MQ=255)

    aaaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAggg                                                                                    <  2:2329252/93‑1 (MQ=255)

     aaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTATCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGc                                                                                   >  2:4096195/1‑93 (MQ=255)

     aaTATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGc                                                                                   <  1:895589/93‑1 (MQ=255)

      atatGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCg                                                                                  <  2:7442556/93‑1 (MQ=255)

      agatgatgGGTTTACTGCTGAGCCTGATTGTCGCTGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCg                                                                                  <  1:7223531/91‑1 (MQ=255)

       tatGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGa                                                                                 >  2:1670360/1‑93 (MQ=255)

       tatGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGa                                                                                 <  1:1901875/93‑1 (MQ=255)

         tgatgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAg                                                                               >  2:3921856/1‑93 (MQ=255)

          gatgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAgg                                                                              >  2:6003390/1‑92 (MQ=255)

          gatgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGt                                                                              <  2:2198730/93‑1 (MQ=255)

           gtgGATTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTa                                                                             <  2:3639023/92‑1 (MQ=255)

           atgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTa                                                                             <  2:1338167/93‑1 (MQ=255)

            tgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAg                                                                            <  1:585722/93‑1 (MQ=255)

            tgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAg                                                                            <  1:2380424/93‑1 (MQ=255)

            tgGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAg                                                                            >  1:6633028/1‑93 (MQ=255)

             gggTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGc                                                                           >  1:1762302/1‑93 (MQ=255)

             gggCTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGGAGTAgg                                                                           >  2:7748848/1‑92 (MQ=255)

              ggTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCg                                                                          >  2:7197068/1‑93 (MQ=255)

              ggTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCg                                                                          >  1:3920753/1‑93 (MQ=255)

               gTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGa                                                                         <  2:7829068/93‑1 (MQ=255)

                tttACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGAt                                                                        >  1:469784/1‑93 (MQ=255)

                tttACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGAt                                                                        >  1:6254802/1‑93 (MQ=255)

                 ttACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGCGAGGCAGGGCGAAGTAGCGATc                                                                       >  2:6442618/1‑93 (MQ=255)

                  tACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATcc                                                                      <  2:194829/93‑1 (MQ=255)

                  tACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATcc                                                                      <  2:4542285/93‑1 (MQ=255)

                   aCTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCt                                                                     <  1:2846080/93‑1 (MQ=255)

                   aCTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCt                                                                     <  1:4948214/93‑1 (MQ=255)

                      gctgAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCa                                                                  >  2:3416121/1‑93 (MQ=255)

                        tgAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCaaa                                                                >  2:5549632/1‑93 (MQ=255)

                         gAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAAc                                                               >  1:1534801/1‑93 (MQ=255)

                            ccTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCa                                                            <  2:85972/93‑1 (MQ=255)

                             cTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCaa                                                           <  2:7507947/93‑1 (MQ=255)

                             cTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCaa                                                           <  1:7047761/93‑1 (MQ=255)

                              tGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAg                                                          <  1:4412834/93‑1 (MQ=255)

                              tGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAg                                                          >  1:5431182/1‑93 (MQ=255)

                                aTTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGc                                                        <  1:953901/93‑1 (MQ=255)

                                aTTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGc                                                        >  2:7789435/1‑93 (MQ=255)

                                aTTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGc                                                        >  1:4732774/1‑93 (MQ=255)

                                   gTCGCCGTTGCGGCGTTTAACATTATTCCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGAAAACGCAAGGCTTa                                                     <  2:1055078/93‑1 (MQ=255)

                                    tCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTaa                                                    <  1:6412892/93‑1 (MQ=255)

                                       ccGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTc                                                 <  2:6532150/93‑1 (MQ=255)

                                       ccGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTc                                                 <  2:5147503/93‑1 (MQ=255)

                                        cGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTcc                                                >  1:3376683/1‑93 (MQ=255)

                                         gTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCcg                                               >  1:4184972/1‑93 (MQ=255)

                                          ttGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCcgc                                              <  2:4504523/93‑1 (MQ=255)

                                          ttGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCcgc                                              <  2:3309767/93‑1 (MQ=255)

                                          ttGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCcgc                                              >  2:348485/1‑93 (MQ=255)

                                          ttGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGCAGCGATCCTGCAAACGCAAGGCTTAACTcccc                                              >  1:2220025/1‑91 (MQ=255)

                                            gcggcgTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGa                                            <  2:7350096/93‑1 (MQ=255)

                                             cggcgTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGAc                                           <  2:6214215/93‑1 (MQ=255)

                                               gcgTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACaa                                         <  1:1301852/93‑1 (MQ=255)

                                                 gTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAAt                                       <  2:5755318/93‑1 (MQ=255)

                                                 gTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAAt                                       >  1:6201496/1‑93 (MQ=255)

                                                 gTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAAt                                       >  2:757178/1‑93 (MQ=255)

                                                  tttAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCCAACGCAAGGCTTAACTCCGCGCCAAATc                                      >  2:5049386/1‑93 (MQ=255)

                                                  tttAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATc                                      >  2:190167/1‑93 (MQ=255)

                                                  tttAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATc                                      <  1:1595492/93‑1 (MQ=255)

                                                  tttAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATc                                      >  2:291695/1‑93 (MQ=255)

                                                    tAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCat                                    <  2:3027756/93‑1 (MQ=255)

                                                      aCATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCatga                                  <  1:3863793/93‑1 (MQ=255)

                                                      aCATTATTACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCatga                                  >  2:4788749/1‑93 (MQ=255)

                                                        attattACCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCatgatg                                >  1:2773495/1‑93 (MQ=255)

                                                          tattaCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAATTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGt                              >  1:5159969/1‑93 (MQ=255)

                                                             taCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCtt                           <  1:1105325/93‑1 (MQ=255)

                                                             taCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCtt                           <  1:7516891/93‑1 (MQ=255)

                                                             taCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCtt                           <  2:1070884/93‑1 (MQ=255)

                                                              aCCTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCttt                          >  1:5303978/1‑93 (MQ=255)

                                                               ccTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTa                         <  2:6707313/93‑1 (MQ=255)

                                                               ccTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTa                         <  1:250188/93‑1 (MQ=255)

                                                                cTCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTAt                        >  2:728767/1‑93 (MQ=255)

                                                                 tCACTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATg                       <  2:2715807/93‑1 (MQ=255)

                                                                   ccTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGt                     <  1:3673712/92‑1 (MQ=255)

                                                                   aCTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGt                     >  2:4692388/1‑93 (MQ=255)

                                                                   aCTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGt                     <  2:329693/93‑1 (MQ=255)

                                                                   aCTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGt                     >  2:4216862/1‑93 (MQ=255)

                                                                    cTAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGAGAAATCATGATGGTCTTTATGGTg                    >  2:5662834/1‑93 (MQ=255)

                                                                     tAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGc                   >  2:5371035/1‑93 (MQ=255)

                                                                     tAGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGc                   >  1:6966043/1‑93 (MQ=255)

                                                                      aGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCa                  >  2:524152/1‑93 (MQ=255)

                                                                      aGGGCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCa                  <  2:680806/93‑1 (MQ=255)

                                                                       gggCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCaa                 >  2:5720925/1‑93 (MQ=255)

                                                                       gggCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCaa                 <  2:1176369/93‑1 (MQ=255)

                                                                        ggCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAg                >  2:6082475/1‑93 (MQ=255)

                                                                        ggCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAg                <  1:4138143/93‑1 (MQ=255)

                                                                         gCTGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAgg               <  1:3084711/93‑1 (MQ=255)

                                                                          gtGATGGTAATGGAGAGGCAGGGCGAAGTAGCGAGCCTGCCAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAggg              <  1:5240542/92‑1 (MQ=255)

                                                                           tGATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAgggg             <  2:6188109/93‑1 (MQ=255)

                                                                            gATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGc            <  1:7892266/93‑1 (MQ=255)

                                                                            gATGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGc            <  1:4811810/93‑1 (MQ=255)

                                                                             aTGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGcc           >  2:5606865/1‑93 (MQ=255)

                                                                             aTGGTAATGGAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGCGcc           >  1:5520149/1‑93 (MQ=255)

                                                                                     ggAGAGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCgg   <  1:2021775/93‑1 (MQ=255)

                                                                                      gagaGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCggg  <  1:3494651/93‑1 (MQ=255)

                                                                                      gagaGGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCggg  >  1:1383252/1‑93 (MQ=255)

AAAAAAATATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGG  >  NC_000913/1175437‑1175615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`