BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,185,646	A→G	T194A (ACT→GCT)	pepT →	putative peptidase T

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,185,646	0	A	G	99.6%	772.7 / ‑4.5	246	T194A (ACT→GCT)	pepT	putative peptidase T
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (138/107); minor base C (1/0); total (139/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01

Only 100 of 249 total aligned reads displayed.

GATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT  >  NC_000913/1185556‑1185735

gATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCt                                                                                         >  1:4917298/1‑93 (MQ=255)

 atatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTg                                                                                        >  2:876443/1‑93 (MQ=255)

 atatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTg                                                                                        <  1:568026/93‑1 (MQ=255)

 atatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTg                                                                                        >  1:3663337/1‑93 (MQ=255)

  tatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGt                                                                                       >  1:7863292/1‑93 (MQ=255)

  tatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGt                                                                                       >  2:2017449/1‑93 (MQ=255)

   atTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGtt                                                                                      >  1:1043954/1‑93 (MQ=255)

   atTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGtt                                                                                      <  1:2544610/93‑1 (MQ=255)

    ttCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTg                                                                                     >  2:917632/1‑93 (MQ=255)

     tCGCGTCGCCTTTACCCCGGATGAGGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGa                                                                                    >  1:3210199/1‑93 (MQ=255)

     tCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGa                                                                                    >  2:7683873/1‑93 (MQ=255)

       gcgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtg                                                                                  >  1:6598239/1‑93 (MQ=255)

         gTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggt                                                                                <  2:3804325/93‑1 (MQ=255)

         gTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggt                                                                                <  1:122399/93‑1 (MQ=255)

         gTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggt                                                                                <  2:5617090/93‑1 (MQ=255)

          tCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtg                                                                               >  1:736517/1‑93 (MQ=255)

           cGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtgg                                                                              <  1:2695286/93‑1 (MQ=255)

           cGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtgg                                                                              <  1:7331921/93‑1 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtggtggg                                                                          >  2:2014846/1‑92 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  2:1115228/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  1:95877/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  1:7099777/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  1:6389044/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  1:607366/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  2:3263445/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  2:6759561/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          >  2:4908274/1‑93 (MQ=255)

                ttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCg                                                                         >  2:1595257/1‑93 (MQ=255)

                ttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCg                                                                         <  1:4428280/93‑1 (MQ=255)

                 tcccccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGt                                                                        <  2:1831192/91‑1 (MQ=255)

                 tACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGt                                                                        <  1:5287814/93‑1 (MQ=255)

                  aCCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTa                                                                       <  1:223918/93‑1 (MQ=255)

                  aCCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTa                                                                       <  2:4544098/93‑1 (MQ=255)

                    cccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAgg                                                                     <  1:3426428/93‑1 (MQ=255)

                     ccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGc                                                                    >  2:7568631/1‑93 (MQ=255)

                      cGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCg                                                                   >  1:4998174/1‑93 (MQ=255)

                       ggATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGa                                                                  <  1:2986103/93‑1 (MQ=255)

                        gATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGaa                                                                 <  1:2990946/93‑1 (MQ=255)

                        gATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGaa                                                                 <  1:7712395/93‑1 (MQ=255)

                          tGAAGAAGTGGGCAAAGGTGCGAAACATTTTTATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACt                                                               <  1:1809969/93‑1 (MQ=255)

                          tGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACt                                                               >  2:2731092/1‑93 (MQ=255)

                            aagaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTgg                                                             <  2:7781901/93‑1 (MQ=255)

                            aagaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTgg                                                             <  2:5339891/93‑1 (MQ=255)

                             agaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGa                                                            >  2:3361758/1‑93 (MQ=255)

                              gaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAg                                                           <  1:4323650/93‑1 (MQ=255)

                              gaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAg                                                           <  2:126524/93‑1 (MQ=255)

                                agTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGtt                                                         <  2:6899546/93‑1 (MQ=255)

                                  tGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTg                                                       >  1:4155754/1‑93 (MQ=255)

                                   gggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGa                                                      <  1:3301826/93‑1 (MQ=255)

                                         aGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACtt                                                <  2:1438946/93‑1 (MQ=255)

                                          ggggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTc                                               >  1:5185499/1‑93 (MQ=255)

                                          ggggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTc                                               <  1:6679904/93‑1 (MQ=255)

                                           gggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCa                                              >  1:888834/1‑93 (MQ=255)

                                            ggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCaa                                             <  1:1452541/93‑1 (MQ=255)

                                            ggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCaa                                             <  2:5930926/93‑1 (MQ=255)

                                            ggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGGTTGAAAACTTCaa                                             >  1:3115534/1‑93 (MQ=255)

                                             gCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAc                                            >  2:3382060/1‑93 (MQ=255)

                                               gAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgc                                          >  2:7183723/1‑93 (MQ=255)

                                               gAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgc                                          >  2:6216039/1‑93 (MQ=255)

                                                aaaCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgcc                                         >  1:1597061/1‑93 (MQ=255)

                                                aaaCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgcc                                         >  2:2615486/1‑93 (MQ=255)

                                                 aaCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgccg                                        >  2:1877231/1‑93 (MQ=255)

                                                  aCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgccgc                                       <  2:5706411/93‑1 (MQ=255)

                                                     ttttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTc                                    >  1:2029114/1‑93 (MQ=255)

                                                       ttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCgg                                  >  2:1192905/1‑93 (MQ=255)

                                                       ttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGGAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCgg                                  <  1:5899380/93‑1 (MQ=255)

                                                        tGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGt                                 >  1:6254295/1‑93 (MQ=255)

                                                         gATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTc                                >  2:5999144/1‑93 (MQ=255)

                                                          aTGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGGGTCGGTCa                               >  1:154886/1‑93 (MQ=255)

                                                           tGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCaa                              <  2:6508542/93‑1 (MQ=255)

                                                            gTTGACGCCTTCGATGTCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCTACGCCGCGTCGGTCAat                             >  2:7046914/1‑93 (MQ=255)

                                                             ttGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAata                            <  2:1076309/93‑1 (MQ=255)

                                                             ttGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAata                            >  1:1150247/1‑93 (MQ=255)

                                                               gACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAatata                          >  2:3566873/1‑92 (MQ=255)

                                                               gACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATc                          <  1:6178935/93‑1 (MQ=255)

                                                                aCGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTTGGTCAATATCa                         >  2:4106553/1‑93 (MQ=255)

                                                                aCGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCa                         <  2:3074287/93‑1 (MQ=255)

                                                                 cGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaa                        >  1:1360498/1‑93 (MQ=255)

                                                                 cGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaa                        >  1:2090712/1‑93 (MQ=255)

                                                                   ccTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaaaa                      >  1:7634922/1‑93 (MQ=255)

                                                                   ccTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaaaa                      >  2:6713028/1‑93 (MQ=255)

                                                                   ccTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaaaa                      >  1:440227/1‑93 (MQ=255)

                                                                    cTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAt                     >  1:4499352/1‑93 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    >  2:730787/1‑93 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    >  2:2212604/1‑93 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    >  2:5253123/1‑93 (MQ=255)

                                                                        gATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTc                 >  1:5729784/1‑93 (MQ=255)

                                                                        gATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTc                 >  1:6763007/1‑93 (MQ=255)

                                                                         aTGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCg                >  2:467666/1‑93 (MQ=255)

                                                                          tGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCgg               <  1:1651434/93‑1 (MQ=255)

                                                                               gCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACa          >  2:3249218/1‑93 (MQ=255)

                                                                                cTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACaa         <  2:7442410/93‑1 (MQ=255)

                                                                                 tGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAt        >  1:6836045/1‑93 (MQ=255)

                                                                                 tGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAt        >  1:718810/1‑93 (MQ=255)

                                                                                 tGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAt        >  1:5441389/1‑93 (MQ=255)

                                                                                 cgggCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAt        <  1:1738963/92‑1 (MQ=255)

                                                                                   ggCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGt      >  2:2696250/1‑93 (MQ=255)

                                                                                   ggCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGt      <  2:4316193/93‑1 (MQ=255)

                                                                                    gCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGtt     >  2:2271943/1‑93 (MQ=255)

                                                                                      ttACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCa   >  2:4615217/1‑93 (MQ=255)

GATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT  >  NC_000913/1185556‑1185735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`