Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 102,502 A→G A90A (GCA→GCG ddlB → D‑alanine‑D‑alanine ligase B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913102,5020AG99.6% 779.8 / ‑5.1 249A90A (GCA→GCGddlBD‑alanine‑D‑alanine ligase B
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (135/113);  total (136/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01

Only 100 of 262 total aligned reads displayed.

CGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGC  >  NC_000913/102412‑102591
                                                                                          |                                                                                         
cgcgCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTc                                                                                         <  2:1511238/93‑1 (MQ=255)
 gcgcTCCACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATACTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCt                                                                                        <  2:4985433/93‑1 (MQ=255)
 gcgcTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCt                                                                                        <  2:2425784/93‑1 (MQ=255)
   gcTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgg                                                                                      >  1:1036307/1‑92 (MQ=255)
   gcTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgc                                                                                      >  2:6067828/1‑93 (MQ=255)
    cTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcg                                                                                     >  1:5115447/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    >  1:1864172/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    >  1:5794753/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    <  1:271931/93‑1 (MQ=255)
     tACACGGTCGCGGCGGGGAAAATGGTCCGCTGCAGGGGATGTTCGAGCTGATGGGCTTGCCTTATACCGGCAGCGGCAGGATGGCGTCTgtcc                                                                                    >  2:6652933/1‑90 (MQ=255)
       cacGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCtt                                                                                  >  2:5567218/1‑93 (MQ=255)
       cacGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCtt                                                                                  <  1:412436/93‑1 (MQ=255)
        acGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCttt                                                                                 >  2:7922476/1‑93 (MQ=255)
        acGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCttt                                                                                 <  2:2185827/93‑1 (MQ=255)
         cGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTc                                                                                >  1:2025266/1‑93 (MQ=255)
          ggTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGCTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCa                                                                               >  1:5615781/1‑93 (MQ=255)
            tCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAAt                                                                             <  2:1474388/93‑1 (MQ=255)
             cgcgGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGAGCTTTCAATg                                                                            >  2:2798078/1‑93 (MQ=255)
               cggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTCTACCGGAGGCGGAGTGATGGGGTCTGCGCTTTCAATggt                                                                          >  1:2182010/1‑92 (MQ=255)
                ggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGAt                                                                         <  2:637455/93‑1 (MQ=255)
                   ggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATaaa                                                                      <  1:4526482/93‑1 (MQ=255)
                   ggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATaaa                                                                      >  1:6885862/1‑93 (MQ=255)
                     tGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACt                                                                    >  2:3251260/1‑93 (MQ=255)
                     tGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACt                                                                    >  1:6098189/1‑93 (MQ=255)
                      gAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTa                                                                   >  1:4062416/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTGTGCGCTTTCAATGGATAAACTAc                                                                  >  2:4277798/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  >  1:3100040/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  >  2:2333248/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  >  2:4545687/1‑93 (MQ=255)
                        aGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACg                                                                 >  1:3515228/1‑93 (MQ=255)
                        aGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACg                                                                 >  1:7119274/1‑93 (MQ=255)
                         gATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACgc                                                                >  2:1449523/1‑93 (MQ=255)
                              tACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCaa                                                           >  2:7928395/1‑93 (MQ=255)
                                cGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAAc                                                         <  2:469977/93‑1 (MQ=255)
                                cGCTGCAGGGGATGCTCGAGCNGNTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAAc                                                         <  1:3824005/93‑1 (MQ=255)
                                  cTGCAGGGGGTGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACtt                                                       <  2:5403417/93‑1 (MQ=255)
                                  cTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACtt                                                       >  2:3037919/1‑93 (MQ=255)
                                  cTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACtt                                                       <  1:4436802/93‑1 (MQ=255)
                                   tGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTc                                                      >  1:5430719/1‑93 (MQ=255)
                                   tGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTc                                                      <  1:1023315/93‑1 (MQ=255)
                                   tGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTc                                                      <  2:3539835/93‑1 (MQ=255)
                                     cAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTa                                                    <  2:1065323/93‑1 (MQ=255)
                                     cAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTa                                                    <  1:798913/93‑1 (MQ=255)
                                       ggggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGGGTCTGGGCTTTCAATGGATAAACTACGCAGCAAACTTCTCTg                                                  >  1:5204381/1‑93 (MQ=255)
                                       ggggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATg                                                  >  1:6523236/1‑93 (MQ=255)
                                       ggggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATg                                                  >  2:3713083/1‑93 (MQ=255)
                                          gATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCa                                               <  1:2356459/93‑1 (MQ=255)
                                           aTGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCaa                                              >  1:6920798/1‑93 (MQ=255)
                                            tGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAg                                             >  2:2552904/1‑93 (MQ=255)
                                             gCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAgg                                            >  2:5849066/1‑93 (MQ=255)
                                             gCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAgg                                            <  1:7856393/93‑1 (MQ=255)
                                             gCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAgg                                            <  2:7898827/93‑1 (MQ=255)
                                             gCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAgg                                            >  2:1925083/1‑93 (MQ=255)
                                              cTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAggg                                           >  2:7500328/1‑92 (MQ=255)
                                              cTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGt                                           >  1:5286846/1‑93 (MQ=255)
                                              cTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATAGCAAGGt                                           >  2:5070768/1‑93 (MQ=255)
                                               tCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTg                                          <  2:6750251/93‑1 (MQ=255)
                                                 gAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGcc                                        >  2:1379697/1‑93 (MQ=255)
                                                 gAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGcc                                        <  1:3650076/93‑1 (MQ=255)
                                                  aGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGTATAAACTACGCAGCAAACTTCTATGGCAAGGTGTCg                                       >  2:7025477/1‑93 (MQ=255)
                                                  aGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCg                                       >  2:1192670/1‑93 (MQ=255)
                                                    cTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGt                                     <  1:1843048/93‑1 (MQ=255)
                                                    cTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGt                                     <  1:5989990/93‑1 (MQ=255)
                                                      gATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGttt                                   >  1:4716434/1‑93 (MQ=255)
                                                      gATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGttt                                   >  2:1798253/1‑93 (MQ=255)
                                                      gATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGttt                                   >  1:6672092/1‑93 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  >  1:7558590/1‑93 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  >  1:7668473/1‑93 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  >  1:3009990/1‑93 (MQ=255)
                                                        tGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTAc                                 <  1:4650303/93‑1 (MQ=255)
                                                         gggCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTAcc                                <  2:6446187/93‑1 (MQ=255)
                                                          ggCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCg                               <  1:2295414/93‑1 (MQ=255)
                                                            cTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGt                             <  1:4257221/93‑1 (MQ=255)
                                                            cTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGt                             >  2:6151706/1‑93 (MQ=255)
                                                            cTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGt                             >  2:6548038/1‑93 (MQ=255)
                                                             ttGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTc                            >  1:6590612/1‑93 (MQ=255)
                                                              tGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTcg                           >  1:492079/1‑93 (MQ=255)
                                                               gCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTcgc                          <  1:5060056/93‑1 (MQ=255)
                                                                ccTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTcgcg                         >  2:5609463/1‑93 (MQ=255)
                                                                  ttATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGcc                       >  2:4869992/1‑93 (MQ=255)
                                                                  ttATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGcc                       <  2:3324659/93‑1 (MQ=255)
                                                                    ataCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGt                     >  1:2878057/1‑93 (MQ=255)
                                                                     taCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTg                    >  1:5760683/1‑93 (MQ=255)
                                                                      aCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTATATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTgg                   <  1:1407801/93‑1 (MQ=255)
                                                                       ccGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  <  1:4889439/93‑1 (MQ=255)
                                                                       ccGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  <  1:950233/93‑1 (MQ=255)
                                                                       ccGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  >  2:3870910/1‑93 (MQ=255)
                                                                       ccGGAAGAGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  <  1:2493678/93‑1 (MQ=255)
                                                                         ggAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTa                <  2:6977746/93‑1 (MQ=255)
                                                                          gAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAg               >  1:3175800/1‑93 (MQ=255)
                                                                          gAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAg               >  2:6674507/1‑93 (MQ=255)
                                                                           aaGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGc              <  1:6338987/93‑1 (MQ=255)
                                                                             gCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGt            >  2:734739/1‑93 (MQ=255)
                                                                             gCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGt            >  2:7778594/1‑93 (MQ=255)
                                                                              gggAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGtt           <  1:1535691/92‑1 (MQ=255)
                                                                                gAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTac         >  2:1572926/1‑92 (MQ=255)
                                                                                gAGTGATGGCGTCTCCGCTTTCAATTGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCTCCGTGGGTAGCGTTaa         <  2:2274576/93‑1 (MQ=255)
                                                                                gAGTGACGGCATCTTATCTAGAAATGGATAAAGTACACAACAAACTGCGATGGCAAGGAACTGGTTTACCGAACCCTCCGTGGGTAGCGTTac         >  2:2578267/1‑92 (MQ=255)
                                                                                  gTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAAcc       <  1:4760993/93‑1 (MQ=255)
                                                                                   tGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAAccc      <  1:1335508/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGC  >  NC_000913/102412‑102591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: