BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,226,344	C→T	A118T (GCC→ACC)	ycgK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,226,344	0	C	T	98.9%	584.7 / ‑5.8	175	A118T (GCC→ACC)	ycgK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (107/65); total (110/65)
Fisher's exact test for biased strand distribution p-value = 5.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 182 total aligned reads displayed.

ATTAACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATC  >  NC_000913/1226254‑1226433

 ttAACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGtgtc                                                                                        >  2:2558413/1‑93 (MQ=255)

  tAACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGtgtcg                                                                                       >  1:34238/1‑93 (MQ=255)

    aCGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGtt                                                                                     <  2:17058/93‑1 (MQ=255)

    aCGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGtt                                                                                     <  1:916612/93‑1 (MQ=255)

     cGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGttt                                                                                    <  1:1837069/93‑1 (MQ=255)

        ttATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCgg                                                                                 >  1:4575389/1‑93 (MQ=255)

        ttATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCgg                                                                                 >  1:564860/1‑93 (MQ=255)

           tGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGtt                                                                              >  2:4515267/1‑93 (MQ=255)

           tGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGtt                                                                              >  2:7074668/1‑93 (MQ=255)

              cGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGc                                                                           >  1:3083037/1‑93 (MQ=255)

                gggAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCaa                                                                         >  1:503960/1‑93 (MQ=255)

                 ggAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAac                                                                        >  1:4456636/1‑93 (MQ=255)

                 ggAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAac                                                                        <  1:3280761/93‑1 (MQ=255)

                 ggAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATAATTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAac                                                                        <  1:887305/93‑1 (MQ=255)

                    gagTCCCCGGCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACt                                                                     <  1:2463333/93‑1 (MQ=255)

                     agTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTc                                                                    <  2:7564631/93‑1 (MQ=255)

                      gTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCg                                                                   >  2:3109049/1‑93 (MQ=255)

                       tCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGc                                                                  >  2:5276072/1‑93 (MQ=255)

                        ccccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCa                                                                 <  2:7265034/93‑1 (MQ=255)

                        ccccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCa                                                                 <  2:4735083/93‑1 (MQ=255)

                          ccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGc                                                               <  1:2660274/93‑1 (MQ=255)

                              cGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCat                                                           >  1:6272964/1‑93 (MQ=255)

                               ggTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCata                                                          <  1:2852128/93‑1 (MQ=255)

                                gTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCatat                                                         <  2:4217603/93‑1 (MQ=255)

                                gTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCatat                                                         <  1:5950857/93‑1 (MQ=255)

                                 ttGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATAtt                                                        >  2:279636/1‑93 (MQ=255)

                                 ttGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATAtt                                                        <  2:3456204/93‑1 (MQ=255)

                                    aCATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGc                                                     <  2:3499377/93‑1 (MQ=255)

                                      aTTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCa                                                   <  1:679597/93‑1 (MQ=255)

                                        ttACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGa                                                 >  1:4329119/1‑93 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                <  1:1084813/93‑1 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                <  1:7633316/93‑1 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                >  1:2169175/1‑93 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                >  2:2094303/1‑93 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                <  1:6101535/93‑1 (MQ=255)

                                         tACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGaa                                                <  1:2740162/93‑1 (MQ=255)

                                           cTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGc                                              >  1:5187872/1‑93 (MQ=255)

                                           cTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGc                                              <  2:765155/93‑1 (MQ=255)

                                            ttAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCa                                             >  2:7311318/1‑93 (MQ=255)

                                             tAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAg                                            <  2:4322927/93‑1 (MQ=255)

                                             tAATTTGAATATCGACGGTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAg                                            <  1:5286280/93‑1 (MQ=255)

                                              aaTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAgg                                           >  2:1601588/1‑93 (MQ=255)

                                               aTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAggg                                          >  2:3020464/1‑93 (MQ=255)

                                                tttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGga                                         <  1:6992260/93‑1 (MQ=255)

                                                tttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGga                                         >  1:5825381/1‑93 (MQ=255)

                                                tttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGga                                         >  2:324474/1‑93 (MQ=255)

                                                tttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGga                                         <  2:2533487/93‑1 (MQ=255)

                                                tttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGga                                         >  2:271190/1‑93 (MQ=255)

                                                 ttGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgag                                        <  2:6858229/93‑1 (MQ=255)

                                                  tGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgagt                                       <  1:7524984/93‑1 (MQ=255)

                                                   gAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgagtg                                      >  1:5878691/1‑93 (MQ=255)

                                                   gAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgagtg                                      >  2:5083998/1‑93 (MQ=255)

                                                    aaTATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgagtga                                     >  2:1110821/1‑93 (MQ=255)

                                                      tatCGACGTTATATTTTTTCGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgagtgagt                                   <  1:7693573/93‑1 (MQ=255)

                                                       atCGACGTTATATTTGTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTa                                  <  2:2963620/93‑1 (MQ=255)

                                                        tCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAt                                 >  2:4013032/1‑93 (MQ=255)

                                                        tCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAt                                 >  2:4171995/1‑93 (MQ=255)

                                                        tCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAt                                 >  2:7251944/1‑93 (MQ=255)

                                                        tCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAt                                 >  2:457917/1‑93 (MQ=255)

                                                        tCGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAt                                 <  1:275895/93‑1 (MQ=255)

                                                         cGACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTAtt                                <  1:2558414/93‑1 (MQ=255)

                                                          gACGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTg                               >  2:6401768/1‑93 (MQ=255)

                                                           aCGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGt                              >  1:6647240/1‑93 (MQ=255)

                                                           aCGTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGt                              >  2:6094566/1‑93 (MQ=255)

                                                             gTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTcc                            >  1:1160036/1‑93 (MQ=255)

                                                             gTTATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTcc                            >  1:7201281/1‑93 (MQ=255)

                                                              ttATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCg                           >  1:2194593/1‑93 (MQ=255)

                                                              ttATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCg                           >  1:2535396/1‑93 (MQ=255)

                                                              ttATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCg                           <  1:3732439/93‑1 (MQ=255)

                                                              ttATATTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCg                           >  2:4272544/1‑93 (MQ=255)

                                                               tataTTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGt                          >  1:6129654/1‑93 (MQ=255)

                                                                atatTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTg                         >  2:7398126/1‑93 (MQ=255)

                                                                 tatTTTTTAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACGCTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGa                        >  1:4811840/1‑93 (MQ=255)

                                                                   ttttttAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACt                      >  1:4245665/1‑93 (MQ=255)

                                                                    tttttAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTGATATTTGCCAGATGCAGGGAGTGAGTATTGTCCGTGACtt                     >  1:7295921/1‑92 (MQ=255)

                                                                    tttttAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTa                     <  2:446826/93‑1 (MQ=255)

                                                                     ttttAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTAt                    >  2:118959/1‑93 (MQ=255)

                                                                      tttAGTTTTGTTTTTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATc                   >  1:188932/1‑93 (MQ=255)

                                                                        tAGTTTTGTTTTCACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGa                 <  2:3614218/93‑1 (MQ=255)

                                                                         aGTTTTGTTTTTACGGTTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAg                <  1:3183213/93‑1 (MQ=255)

                                                                           ttttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGtt              >  2:447821/1‑93 (MQ=255)

                                                                           ttttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGtt              >  1:4744787/1‑93 (MQ=255)

                                                                           ttttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGtt              >  2:6671756/1‑93 (MQ=255)

                                                                            tttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTc             >  1:563720/1‑93 (MQ=255)

                                                                            tttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTc             <  2:7445455/93‑1 (MQ=255)

                                                                             ttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCt            >  2:5226943/1‑93 (MQ=255)

                                                                             ttgttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGGATTGTCCGTGACTATCGAGTTCt            >  2:4292067/1‑93 (MQ=255)

                                                                              tgttttTACGGGTGTTGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTg           <  1:824755/93‑1 (MQ=255)

                                                                               gttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTgg          >  2:2293751/1‑93 (MQ=255)

                                                                               gttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTgg          >  1:2075000/1‑93 (MQ=255)

                                                                               gttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTgg          >  1:4297460/1‑93 (MQ=255)

                                                                               gttttTACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTgg          >  1:5563929/1‑93 (MQ=255)

                                                                                tttttACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTggg         >  1:1649585/1‑93 (MQ=255)

                                                                                tttttACGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTggg         <  1:1429513/93‑1 (MQ=255)

                                                                                 ttttACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGATCTgggg        >  2:3304528/1‑93 (MQ=255)

                                                                                     aCGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAata    <  1:1336511/93‑1 (MQ=255)

                                                                                      cGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAatat   <  2:7360635/93‑1 (MQ=255)

                                                                                      cGGGTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAatat   >  2:3067350/1‑93 (MQ=255)

                                                                                       gggTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATc  >  2:688608/1‑93 (MQ=255)

                                                                                       gggTGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGGTCTGGGGAATATc  >  2:7816479/1‑93 (MQ=255)

ATTAACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATC  >  NC_000913/1226254‑1226433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`