BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,235,760	A→G	Y235Y (TAT→TAC)	ycgB ←	putative sporulation protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,235,760	0	A	G	100.0%	596.3 / NA	191	Y235Y (TAT→TAC)	ycgB	putative sporulation protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (91/100); total (91/100)

Only 100 of 209 total aligned reads displayed.

CACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTC  >  NC_000913/1235670‑1235849

cacaATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTa                                                                                         <  2:4015073/93‑1 (MQ=255)

 acaATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAg                                                                                        >  1:6088609/1‑93 (MQ=255)

 acaATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAg                                                                                        >  1:2404428/1‑93 (MQ=255)

   aaTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCTTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcg                                                                                      <  1:7219260/93‑1 (MQ=255)

   aaTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcg                                                                                      >  2:4395502/1‑93 (MQ=255)

    aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     <  1:5789239/93‑1 (MQ=255)

    aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     >  1:1522776/1‑93 (MQ=255)

    aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     <  2:4921577/93‑1 (MQ=255)

    aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     >  2:3530731/1‑93 (MQ=255)

    aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     >  2:3072020/1‑93 (MQ=255)

     tACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcggc                                                                                    >  2:6236038/1‑93 (MQ=255)

        gCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGgcgcg                                                                                 >  1:467830/1‑93 (MQ=255)

           ggATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCtt                                                                              >  1:5615550/1‑93 (MQ=255)

            gATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTc                                                                             <  2:3347123/93‑1 (MQ=255)

            gATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTc                                                                             >  2:2565304/1‑93 (MQ=255)

            gATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTc                                                                             >  2:7634078/1‑93 (MQ=255)

             ttttCCCGCTGCCATGATTCCAGCAGGGGCGTTTTTTTCCCAAAAAAAAAGAGCGGTTTTTTTTGGGGTTGGGAGGGGTGGGGGCGCGtttaa                                                                            <  2:913669/92‑3 (MQ=255)

             aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCa                                                                            >  2:4260291/1‑93 (MQ=255)

               ttCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGc                                                                          >  1:1226241/1‑93 (MQ=255)

                tCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCa                                                                         <  1:2713454/93‑1 (MQ=255)

                  aCGCTGCCATGATTCCAGCAGTGGCGCCTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAAc                                                                       >  1:3089548/1‑93 (MQ=255)

                  aCGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAAc                                                                       >  1:7070859/1‑93 (MQ=255)

                    gCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCg                                                                     >  2:1726524/1‑93 (MQ=255)

                      tGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtt                                                                   <  2:5741669/93‑1 (MQ=255)

                       gCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGttt                                                                  <  1:3893518/93‑1 (MQ=255)

                        ccATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtttt                                                                 <  1:4675978/93‑1 (MQ=255)

                        ccATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtttt                                                                 <  2:5796143/93‑1 (MQ=255)

                         cATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtc                                                                >  1:7311058/1‑93 (MQ=255)

                          aTGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtct                                                               >  2:7214496/1‑93 (MQ=255)

                          aTGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtct                                                               >  2:3611372/1‑93 (MQ=255)

                           tGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCAGTTtctc                                                              >  1:4512390/1‑93 (MQ=255)

                                   gcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTcgc                                                      <  2:7879348/93‑1 (MQ=255)

                                      gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCt                                                   >  2:1424342/1‑93 (MQ=255)

                                      gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCt                                                   <  2:2783200/93‑1 (MQ=255)

                                        ggCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTc                                                 <  2:4176514/93‑1 (MQ=255)

                                        ggCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTc                                                 <  2:3727567/93‑1 (MQ=255)

                                          cgcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCgg                                               >  2:548682/1‑93 (MQ=255)

                                           gcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGc                                              >  2:1116446/1‑93 (MQ=255)

                                            cATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGcg                                             >  2:2974215/1‑92 (MQ=255)

                                             aTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAg                                            >  1:3066894/1‑93 (MQ=255)

                                             aTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAg                                            <  1:6044823/93‑1 (MQ=255)

                                              tttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAgg                                           >  1:2170769/1‑93 (MQ=255)

                                              tttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAgg                                           >  1:7873464/1‑93 (MQ=255)

                                               ttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAggg                                          <  1:6752527/93‑1 (MQ=255)

                                                tttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGt                                         <  2:612532/93‑1 (MQ=255)

                                                tttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCACGCGCTTCGGCAGGGt                                         >  2:4538902/1‑93 (MQ=255)

                                                 ttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTa                                        <  1:4928543/93‑1 (MQ=255)

                                                 ttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTa                                        <  2:6201270/93‑1 (MQ=255)

                                                  tctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTAc                                       <  1:801731/93‑1 (MQ=255)

                                                   ctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTGCg                                      <  1:3257968/93‑1 (MQ=255)

                                                    tcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGc                                     >  2:1352635/1‑93 (MQ=255)

                                                     ccATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGcc                                    >  2:5327594/1‑93 (MQ=255)

                                                        tAAAATAGAGGTGGTTTTGTGGGGGTGGGGGCGGGTAGCGGCGCGCTTCAGCATCCTTTTTCTCTCCCGCGCGCTTCGGCAGGGTACGCCaga                                 <  2:7655043/93‑1 (MQ=255)

                                                        tAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCaga                                 >  2:7585197/1‑93 (MQ=255)

                                                        tAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCaga                                 >  2:2562713/1‑93 (MQ=255)

                                                          aaaTAGAGCAGTTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGc                               <  1:3104495/93‑1 (MQ=255)

                                                          aaaTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGc                               <  2:154238/93‑1 (MQ=255)

                                                           aaTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCa                              <  2:3919766/93‑1 (MQ=255)

                                                            aTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCat                             >  1:6398324/1‑93 (MQ=255)

                                                            aTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCat                             >  2:5920929/1‑93 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            >  2:5876500/1‑93 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            >  2:6672504/1‑93 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            <  1:83157/93‑1 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            <  1:2589096/93‑1 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            <  2:4660931/93‑1 (MQ=255)

                                                             tAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCata                            <  2:5613993/93‑1 (MQ=255)

                                                              agagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCatat                           <  1:7835060/93‑1 (MQ=255)

                                                              agagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCatat                           <  2:1179750/93‑1 (MQ=255)

                                                               gagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATAtt                          <  2:223978/93‑1 (MQ=255)

                                                               gagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATAtt                          <  2:2010192/93‑1 (MQ=255)

                                                               gagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATAtt                          >  1:1798685/1‑93 (MQ=255)

                                                                 gCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGa                        >  1:1454463/1‑93 (MQ=255)

                                                                 gCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGa                        <  2:1494882/93‑1 (MQ=255)

                                                                  cAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAc                       <  2:1144006/93‑1 (MQ=255)

                                                                   aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      >  1:2470537/1‑93 (MQ=255)

                                                                   aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      >  2:4683529/1‑93 (MQ=255)

                                                                   aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      <  2:1800708/93‑1 (MQ=255)

                                                                   aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      <  2:6573310/93‑1 (MQ=255)

                                                                      ttttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGa                   >  1:2456713/1‑93 (MQ=255)

                                                                       tttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGAc                  <  2:6088416/93‑1 (MQ=255)

                                                                       tttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGAc                  <  2:4943190/93‑1 (MQ=255)

                                                                        ttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACt                 >  1:3973437/1‑93 (MQ=255)

                                                                          cTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACttt               >  2:6939042/1‑93 (MQ=255)

                                                                          cTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACttt               >  2:1916386/1‑93 (MQ=255)

                                                                            tgtgGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGc             <  1:1195498/93‑1 (MQ=255)

                                                                            tgtgGTTCGGACGGGTAACGACGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGTATATTGACCTGACTTTGc             >  1:3720805/1‑93 (MQ=255)

                                                                             gtgGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCa            <  1:7886177/93‑1 (MQ=255)

                                                                               ggTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGa          <  1:3378749/93‑1 (MQ=255)

                                                                               ggTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGa          <  1:5409159/93‑1 (MQ=255)

                                                                                 ttCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATa        <  2:6316029/93‑1 (MQ=255)

                                                                                 ttCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATa        >  1:4378228/1‑93 (MQ=255)

                                                                                 gtCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATa        <  2:3388058/92‑1 (MQ=255)

                                                                                  tCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAc       <  1:2973643/93‑1 (MQ=255)

                                                                                  tCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAc       <  2:3479139/93‑1 (MQ=255)

                                                                                   cggacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAct      <  2:726954/93‑1 (MQ=255)

                                                                                   cggacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAct      >  2:3925733/1‑93 (MQ=255)

                                                                                     gacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGGACGCCAGAGCATATTGACCTGACTTTGAAGATActct    >  1:5196324/1‑93 (MQ=255)

                                                                                      acgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCtt   >  1:6108080/1‑93 (MQ=255)

                                                                                       cgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTc  <  1:2122527/93‑1 (MQ=255)

                                                                                       cgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTc  <  1:5579270/93‑1 (MQ=255)

CACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTC  >  NC_000913/1235670‑1235849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`